RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 HERC1Q15751 4861 aa6.57□□□□□ -1.36
SPTBN1-203ENST00000389980 XP32Q5T750 250 aa6.56□□□□□ -1.36
SPTBN1-203ENST00000389980 ACYP2P14621 99 aa6.54□□□□□ -1.36
SPTBN1-203ENST00000389980 IGKV2D-30A0A075B6S6 120 aa6.52□□□□□ -1.36
SPTBN1-203ENST00000389980 IGKV2-30P06310 120 aa6.52□□□□□ -1.36
SPTBN1-203ENST00000389980 LINC01554Q52M75 96 aa6.52□□□□□ -1.36
SPTBN1-203ENST00000389980 SPATA8Q6RVD6 105 aa6.51□□□□□ -1.37
SPTBN1-203ENST00000389980 TPRXLQ17RH7 258 aa6.5□□□□□ -1.37
SPTBN1-203ENST00000389980 RPL37P61927 97 aaKnown RBP6.49□□□□□ -1.37
SPTBN1-203ENST00000389980 DMAC1Q96GE9 116 aa6.44□□□□□ -1.38
SPTBN1-203ENST00000389980 A0A1B0GU69 56 aa6.43□□□□□ -1.38
SPTBN1-203ENST00000389980 UQCR11O14957 56 aa6.42□□□□□ -1.38
SPTBN1-203ENST00000389980 HMCN2Q8NDA2 5059 aa6.41□□□□□ -1.38
SPTBN1-203ENST00000389980 PRAC1Q96KF2 57 aa6.41□□□□□ -1.38
SPTBN1-203ENST00000389980 MIR22HGQ0VDD5 57 aa6.39□□□□□ -1.39
SPTBN1-203ENST00000389980 H3BS24 57 aa6.34□□□□□ -1.39
SPTBN1-203ENST00000389980 ADM2Q7Z4H4 148 aa6.34□□□□□ -1.39
SPTBN1-203ENST00000389980 MUC17Q685J3 4493 aa6.29□□□□□ -1.4
SPTBN1-203ENST00000389980 SEC61BP60468 96 aaKnown RBP6.27□□□□□ -1.41
SPTBN1-203ENST00000389980 KRTAP3-1Q9BYR8 98 aa6.27□□□□□ -1.41
SPTBN1-203ENST00000389980 CSAG1Q6PB30 78 aa6.26□□□□□ -1.41
SPTBN1-203ENST00000389980 KRTAP4-1Q9BYQ7 146 aa6.24□□□□□ -1.41
SPTBN1-203ENST00000389980 MUC2Q02817 5179 aa6.24□□□□□ -1.41
SPTBN1-203ENST00000389980 COX6B2Q6YFQ2 88 aa6.23□□□□□ -1.41
SPTBN1-203ENST00000389980 UBR4Q5T4S7 5183 aa6.16□□□□□ -1.42
SPTBN1-203ENST00000389980 KRTAP25-1Q3LHN0 102 aa6.14□□□□□ -1.43
SPTBN1-203ENST00000389980 RNF213Q63HN8 5207 aa6.11□□□□□ -1.43
SPTBN1-203ENST00000389980 ROMO1P60602 79 aa6.1□□□□□ -1.43
SPTBN1-203ENST00000389980 H1FX-AS1Q4G0G2 97 aa6.07□□□□□ -1.44
SPTBN1-203ENST00000389980 S4R3F8 94 aa6.05□□□□□ -1.44
SPTBN1-203ENST00000389980 KRTAP3-3Q9BYR6 98 aa6.04□□□□□ -1.44
SPTBN1-203ENST00000389980 KRTAP19-2Q3LHN2 52 aa6.03□□□□□ -1.44
SPTBN1-203ENST00000389980 H0YAA0 97 aa6□□□□□ -1.45
SPTBN1-203ENST00000389980 K7ERS5 55 aa6□□□□□ -1.45
SPTBN1-203ENST00000389980 FLGP20930 4061 aaPredicted RBP6□□□□□ -1.45
SPTBN1-203ENST00000389980 A0A1B0GU33 70 aa5.99□□□□□ -1.45
SPTBN1-203ENST00000389980 FAT4Q6V0I7 4981 aa5.97□□□□□ -1.45
SPTBN1-203ENST00000389980 LCE2CQ5TA81 110 aa5.9□□□□□ -1.47
SPTBN1-203ENST00000389980 P0C880 135 aa5.83□□□□□ -1.48
SPTBN1-203ENST00000389980 KRTAP3-2Q9BYR7 98 aa5.82□□□□□ -1.48
SPTBN1-203ENST00000389980 KRTAP10-6P60371 365 aaPredicted RBP5.81□□□□□ -1.48
SPTBN1-203ENST00000389980 MT1HP80294 61 aa5.77□□□□□ -1.49
SPTBN1-203ENST00000389980 KRTAP13-4Q3LI77 160 aa5.74□□□□□ -1.49
SPTBN1-203ENST00000389980 M0R2T5 61 aa5.73□□□□□ -1.49
SPTBN1-203ENST00000389980 SPINT4Q6UDR6 99 aa5.73□□□□□ -1.49
SPTBN1-203ENST00000389980 A0A0D9SG42 100 aa5.7□□□□□ -1.5
SPTBN1-203ENST00000389980 CRIPTQ9P021 101 aa5.68□□□□□ -1.5
SPTBN1-203ENST00000389980 LORP23490 312 aaPredicted RBP5.67□□□□□ -1.5
SPTBN1-203ENST00000389980 KRTAP15-1Q3LI76 137 aa5.67□□□□□ -1.5
SPTBN1-203ENST00000389980 NDUFAF8A1L188 74 aa5.59□□□□□ -1.52
SPTBN1-203ENST00000389980 M0QZ58 72 aa5.59□□□□□ -1.52
SPTBN1-203ENST00000389980 R4GN34 69 aa5.57□□□□□ -1.52
SPTBN1-203ENST00000389980 KRTAP9-8Q9BYQ0 159 aa5.56□□□□□ -1.52
SPTBN1-203ENST00000389980 MT2AP02795 61 aa5.55□□□□□ -1.52
SPTBN1-203ENST00000389980 MT1FP04733 61 aa5.53□□□□□ -1.52
SPTBN1-203ENST00000389980 LCE2AQ5TA79 106 aaPredicted RBP5.53□□□□□ -1.52
SPTBN1-203ENST00000389980 KRTAP12-2P59991 146 aa5.52□□□□□ -1.53
SPTBN1-203ENST00000389980 KRTAP10-10P60014 251 aa5.51□□□□□ -1.53
SPTBN1-203ENST00000389980 KRTAP12-1P59990 96 aa5.48□□□□□ -1.53
SPTBN1-203ENST00000389980 C10orf95Q9H7T3 257 aa5.48□□□□□ -1.53
SPTBN1-203ENST00000389980 KRTAP19-1Q8IUB9 90 aa5.42□□□□□ -1.54
SPTBN1-203ENST00000389980 SPRR2GQ9BYE4 73 aa5.4□□□□□ -1.55
SPTBN1-203ENST00000389980 A0A0A0MQY5 61 aa5.36□□□□□ -1.55
SPTBN1-203ENST00000389980 KRTAP9-3Q9BYQ3 159 aa5.35□□□□□ -1.55
SPTBN1-203ENST00000389980 LUZP6Q538Z0 58 aa5.28□□□□□ -1.56
SPTBN1-203ENST00000389980 PLAC4Q8WY50 150 aa5.25□□□□□ -1.57
SPTBN1-203ENST00000389980 KRTAP19-8Q3LI54 63 aa5.25□□□□□ -1.57
SPTBN1-203ENST00000389980 LCE2BO14633 110 aa5.23□□□□□ -1.57
SPTBN1-203ENST00000389980 CAMK2N1Q7Z7J9 78 aa5.23□□□□□ -1.57
SPTBN1-203ENST00000389980 MT1BP07438 61 aa5.22□□□□□ -1.57
SPTBN1-203ENST00000389980 USH2AO75445 5202 aa5.2□□□□□ -1.58
SPTBN1-203ENST00000389980 KRTAP9-2Q9BYQ4 174 aa5.18□□□□□ -1.58
SPTBN1-203ENST00000389980 PP632Q6XCG6 107 aa5.18□□□□□ -1.58
SPTBN1-203ENST00000389980 KRTAP9-6A0A140TA67 174 aa5.17□□□□□ -1.58
SPTBN1-203ENST00000389980 FSIP2Q5CZC0 6907 aa5.07□□□□□ -1.6
SPTBN1-203ENST00000389980 MT1XP80297 61 aa5.06□□□□□ -1.6
SPTBN1-203ENST00000389980 KRTAP10-5P60370 271 aa5.05□□□□□ -1.6
SPTBN1-203ENST00000389980 SSPOA2VEC9 5147 aa5.03□□□□□ -1.6
SPTBN1-203ENST00000389980 KRTAP23-1A1A580 65 aa4.98□□□□□ -1.61
SPTBN1-203ENST00000389980 LCE2DQ5TA82 110 aaPredicted RBP4.98□□□□□ -1.61
SPTBN1-203ENST00000389980 TNP1P09430 55 aa4.95□□□□□ -1.62
SPTBN1-203ENST00000389980 PRO2289Q9P1D8 64 aa4.93□□□□□ -1.62
SPTBN1-203ENST00000389980 SPRR5A0A1B0GTR4 108 aa4.9□□□□□ -1.62
SPTBN1-203ENST00000389980 KRTAP10-7P60409 375 aaPredicted RBP4.88□□□□□ -1.63
SPTBN1-203ENST00000389980 KRTAP19-6Q3LI70 58 aa4.85□□□□□ -1.63
SPTBN1-203ENST00000389980 KMT2DO14686 5537 aa4.84□□□□□ -1.64
SPTBN1-203ENST00000389980 CRCT1Q9UGL9 99 aa4.82□□□□□ -1.64
SPTBN1-203ENST00000389980 FCGBPQ9Y6R7 5405 aaPredicted RBP4.8□□□□□ -1.64
SPTBN1-203ENST00000389980 LCE3AQ5TA76 89 aa4.8□□□□□ -1.64
SPTBN1-203ENST00000389980 KRTAP10-12P60413 245 aa4.78□□□□□ -1.64
SPTBN1-203ENST00000389980 KRTAP4-8A0A0G2JLE6 195 aa4.72□□□□□ -1.65
SPTBN1-203ENST00000389980 KRTAP4-8Q9BYQ9 185 aa4.72□□□□□ -1.65
SPTBN1-203ENST00000389980 INE1O15225 51 aa4.71□□□□□ -1.66
SPTBN1-203ENST00000389980 KRTAP8-1Q8IUC2 63 aa4.64□□□□□ -1.67
SPTBN1-203ENST00000389980 KRTAP9-7A8MTY7 169 aa4.6□□□□□ -1.67
SPTBN1-203ENST00000389980 KRTAP19-5Q3LI72 72 aa4.58□□□□□ -1.68
SPTBN1-203ENST00000389980 KRTAP12-3P60328 96 aa4.57□□□□□ -1.68
SPTBN1-203ENST00000389980 MACF1Q9UPN3 7388 aaKnown RBP4.57□□□□□ -1.68
SPTBN1-203ENST00000389980 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.51□□□□□ -1.69
SPTBN1-203ENST00000389980 KRTAP19-7Q3SYF9 63 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms