RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 VPS13BQ7Z7G8 4022 aa7.88□□□□□ -1.15
VLDLR-202ENST00000382099 PKD1P98161 4303 aa7.85□□□□□ -1.15
VLDLR-202ENST00000382099 KRTAP10-6P60371 365 aaPredicted RBP7.83□□□□□ -1.16
VLDLR-202ENST00000382099 KRTAP12-2P59991 146 aa7.8□□□□□ -1.16
VLDLR-202ENST00000382099 KRTAP1-4P0C5Y4 121 aa7.74□□□□□ -1.17
VLDLR-202ENST00000382099 MYCBP2O75592 4640 aa7.71□□□□□ -1.17
VLDLR-202ENST00000382099 PLAC4Q8WY50 150 aa7.68□□□□□ -1.18
VLDLR-202ENST00000382099 KRTAP3-2Q9BYR7 98 aa7.67□□□□□ -1.18
VLDLR-202ENST00000382099 XP32Q5T750 250 aa7.65□□□□□ -1.19
VLDLR-202ENST00000382099 KMT2CQ8NEZ4 4911 aaKnown RBP7.63□□□□□ -1.19
VLDLR-202ENST00000382099 DYNC1H1Q14204 4646 aaKnown RBP7.63□□□□□ -1.19
VLDLR-202ENST00000382099 KRTAP12-1P59990 96 aa7.62□□□□□ -1.19
VLDLR-202ENST00000382099 LRP1Q07954 4544 aaKnown RBP7.61□□□□□ -1.19
VLDLR-202ENST00000382099 SACSQ9NZJ4 4579 aa7.6□□□□□ -1.19
VLDLR-202ENST00000382099 KRTAP3-3Q9BYR6 98 aa7.6□□□□□ -1.19
VLDLR-202ENST00000382099 SEC61BP60468 96 aaKnown RBP7.56□□□□□ -1.2
VLDLR-202ENST00000382099 APOBP04114 4563 aaKnown RBP7.5□□□□□ -1.21
VLDLR-202ENST00000382099 FAT3Q8TDW7 4589 aa7.48□□□□□ -1.21
VLDLR-202ENST00000382099 KRTAP10-8P60410 259 aa7.48□□□□□ -1.21
VLDLR-202ENST00000382099 PKHD1L1Q86WI1 4243 aa7.44□□□□□ -1.22
VLDLR-202ENST00000382099 RPS29P62273 56 aaKnown RBP7.4□□□□□ -1.22
VLDLR-202ENST00000382099 KIAA1109Q2LD37 5005 aa7.36□□□□□ -1.23
VLDLR-202ENST00000382099 HSPG2P98160 4391 aa7.32□□□□□ -1.24
VLDLR-202ENST00000382099 M0QZ58 72 aa7.32□□□□□ -1.24
VLDLR-202ENST00000382099 RYR2Q92736 4967 aa7.3□□□□□ -1.24
VLDLR-202ENST00000382099 RYR3Q15413 4870 aa7.29□□□□□ -1.24
VLDLR-202ENST00000382099 KRTAP10-4P60372 401 aaPredicted RBP7.27□□□□□ -1.25
VLDLR-202ENST00000382099 LPAP08519 4548 aa7.25□□□□□ -1.25
VLDLR-202ENST00000382099 RYR1P21817 5038 aa7.21□□□□□ -1.26
VLDLR-202ENST00000382099 R4GN34 69 aa7.21□□□□□ -1.26
VLDLR-202ENST00000382099 KRTAP17-1Q9BYP8 105 aa7.18□□□□□ -1.26
VLDLR-202ENST00000382099 LRP2P98164 4655 aa7.16□□□□□ -1.26
VLDLR-202ENST00000382099 TNXBP22105 4242 aa7.15□□□□□ -1.27
VLDLR-202ENST00000382099 A0A1B0GVY2 172 aa7.14□□□□□ -1.27
VLDLR-202ENST00000382099 Q5VSD8 79 aa7.14□□□□□ -1.27
VLDLR-202ENST00000382099 CAMK2N1Q7Z7J9 78 aa7.13□□□□□ -1.27
VLDLR-202ENST00000382099 EPPK1P58107 5090 aaKnown RBP7.11□□□□□ -1.27
VLDLR-202ENST00000382099 ABCA13Q86UQ4 5058 aa7.08□□□□□ -1.28
VLDLR-202ENST00000382099 PP632Q6XCG6 107 aa7.03□□□□□ -1.28
VLDLR-202ENST00000382099 MUC2Q02817 5179 aa6.99□□□□□ -1.29
VLDLR-202ENST00000382099 PRO2289Q9P1D8 64 aa6.97□□□□□ -1.29
VLDLR-202ENST00000382099 KRTAP4-5Q9BYR2 181 aa6.9□□□□□ -1.3
VLDLR-202ENST00000382099 LORP23490 312 aaPredicted RBP6.86□□□□□ -1.31
VLDLR-202ENST00000382099 MT1HL1P0DM35 61 aa6.78□□□□□ -1.32
VLDLR-202ENST00000382099 TNP1P09430 55 aa6.7□□□□□ -1.34
VLDLR-202ENST00000382099 HERC2O95714 4834 aa6.68□□□□□ -1.34
VLDLR-202ENST00000382099 SPRR5A0A1B0GTR4 108 aa6.68□□□□□ -1.34
VLDLR-202ENST00000382099 J3QL48 77 aa6.66□□□□□ -1.34
VLDLR-202ENST00000382099 INE1O15225 51 aa6.64□□□□□ -1.35
VLDLR-202ENST00000382099 HERC1Q15751 4861 aa6.64□□□□□ -1.35
VLDLR-202ENST00000382099 FAT4Q6V0I7 4981 aa6.62□□□□□ -1.35
VLDLR-202ENST00000382099 RNF213Q63HN8 5207 aa6.59□□□□□ -1.35
VLDLR-202ENST00000382099 KRTAP4-1Q9BYQ7 146 aa6.53□□□□□ -1.36
VLDLR-202ENST00000382099 BIRC6Q9NR09 4857 aa6.52□□□□□ -1.36
VLDLR-202ENST00000382099 MUC17Q685J3 4493 aa6.51□□□□□ -1.37
VLDLR-202ENST00000382099 PCLOQ9Y6V0 5065 aa6.42□□□□□ -1.38
VLDLR-202ENST00000382099 KRTAP23-1A1A580 65 aa6.37□□□□□ -1.39
VLDLR-202ENST00000382099 UBR4Q5T4S7 5183 aa6.36□□□□□ -1.39
VLDLR-202ENST00000382099 KRTAP19-2Q3LHN2 52 aa6.26□□□□□ -1.41
VLDLR-202ENST00000382099 HMCN2Q8NDA2 5059 aa6.25□□□□□ -1.41
VLDLR-202ENST00000382099 LCE3AQ5TA76 89 aa6.23□□□□□ -1.41
VLDLR-202ENST00000382099 M0R2T5 61 aa6.14□□□□□ -1.43
VLDLR-202ENST00000382099 FLGP20930 4061 aaPredicted RBP6.13□□□□□ -1.43
VLDLR-202ENST00000382099 USH2AO75445 5202 aa5.95□□□□□ -1.46
VLDLR-202ENST00000382099 KRTAP12-3P60328 96 aa5.87□□□□□ -1.47
VLDLR-202ENST00000382099 KRTAP8-1Q8IUC2 63 aa5.87□□□□□ -1.47
VLDLR-202ENST00000382099 KRTAP10-10P60014 251 aa5.84□□□□□ -1.47
VLDLR-202ENST00000382099 FSIP2Q5CZC0 6907 aa5.83□□□□□ -1.48
VLDLR-202ENST00000382099 KMT2DO14686 5537 aa5.81□□□□□ -1.48
VLDLR-202ENST00000382099 LCE2CQ5TA81 110 aa5.8□□□□□ -1.48
VLDLR-202ENST00000382099 KRTAP10-12P60413 245 aa5.8□□□□□ -1.48
VLDLR-202ENST00000382099 KRTAP19-1Q8IUB9 90 aa5.76□□□□□ -1.49
VLDLR-202ENST00000382099 SPRR2GQ9BYE4 73 aa5.74□□□□□ -1.49
VLDLR-202ENST00000382099 MT1FP04733 61 aa5.71□□□□□ -1.5
VLDLR-202ENST00000382099 MT1HP80294 61 aa5.7□□□□□ -1.5
VLDLR-202ENST00000382099 MT2AP02795 61 aa5.63□□□□□ -1.51
VLDLR-202ENST00000382099 KRTAP10-5P60370 271 aa5.53□□□□□ -1.52
VLDLR-202ENST00000382099 KRTAP9-8Q9BYQ0 159 aa5.52□□□□□ -1.53
VLDLR-202ENST00000382099 LCE3CQ5T5A8 94 aa5.5□□□□□ -1.53
VLDLR-202ENST00000382099 KRTAP10-7P60409 375 aaPredicted RBP5.47□□□□□ -1.53
VLDLR-202ENST00000382099 KRTAP19-8Q3LI54 63 aa5.45□□□□□ -1.54
VLDLR-202ENST00000382099 MT1BP07438 61 aa5.44□□□□□ -1.54
VLDLR-202ENST00000382099 MT1XP80297 61 aa5.44□□□□□ -1.54
VLDLR-202ENST00000382099 KRTAP9-6A8MVA2 160 aa5.39□□□□□ -1.55
VLDLR-202ENST00000382099 KRTAP19-5Q3LI72 72 aa5.38□□□□□ -1.55
VLDLR-202ENST00000382099 KRTAP2-3P0C7H8 128 aa5.32□□□□□ -1.56
VLDLR-202ENST00000382099 KRTAP2-4Q9BYR9 128 aa5.32□□□□□ -1.56
VLDLR-202ENST00000382099 KRTAP2-1Q9BYU5 128 aa5.32□□□□□ -1.56
VLDLR-202ENST00000382099 KRTAP4-8A0A0G2JLE6 195 aa5.27□□□□□ -1.57
VLDLR-202ENST00000382099 KRTAP4-8Q9BYQ9 185 aa5.27□□□□□ -1.57
VLDLR-202ENST00000382099 KRTAP9-3Q9BYQ3 159 aa5.26□□□□□ -1.57
VLDLR-202ENST00000382099 DSTQ03001 7570 aaKnown RBP5.24□□□□□ -1.57
VLDLR-202ENST00000382099 KRTAP4-7Q9BYR0 210 aa5.23□□□□□ -1.57
VLDLR-202ENST00000382099 LCE2BO14633 110 aa5.22□□□□□ -1.57
VLDLR-202ENST00000382099 KRTAP12-4P60329 112 aa5.16□□□□□ -1.58
VLDLR-202ENST00000382099 LCE2AQ5TA79 106 aaPredicted RBP5.12□□□□□ -1.59
VLDLR-202ENST00000382099 MUC12Q9UKN1 5478 aa5.1□□□□□ -1.59
VLDLR-202ENST00000382099 SSPOA2VEC9 5147 aa5.09□□□□□ -1.6
VLDLR-202ENST00000382099 FCGBPQ9Y6R7 5405 aaPredicted RBP5.07□□□□□ -1.6
VLDLR-202ENST00000382099 OBSCNQ5VST9 7968 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms