RNA–Protein interactions for RNA: ENST00000382096.5

VLDLR-201, Transcript of very low density lipoprotein receptor, humanhuman

TSL 5

Gene VLDLR, Length 736 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-201ENST00000382096 KMT2DO14686 5537 aa10.15□□□□□ -0.79
VLDLR-201ENST00000382096 MDN1Q9NU22 5596 aa10.12□□□□□ -0.79
VLDLR-201ENST00000382096 KLKP1Q107X0 134 aa10.06□□□□□ -0.8
VLDLR-201ENST00000382096 KRTAP3-3Q9BYR6 98 aa10.06□□□□□ -0.8
VLDLR-201ENST00000382096 ATP5EP2Q5VTU8 51 aa10.02□□□□□ -0.81
VLDLR-201ENST00000382096 CYP4F30PQ9H0H9 118 aa10.01□□□□□ -0.81
VLDLR-201ENST00000382096 LINC00643Q86TS7 51 aa9.96□□□□□ -0.82
VLDLR-201ENST00000382096 HIST1H4AP62805 103 aaKnown RBP9.95□□□□□ -0.82
VLDLR-201ENST00000382096 KRTAP2-3P0C7H8 128 aa9.93□□□□□ -0.82
VLDLR-201ENST00000382096 KRTAP2-4Q9BYR9 128 aa9.93□□□□□ -0.82
VLDLR-201ENST00000382096 A0A087WVE0 104 aa9.92□□□□□ -0.82
VLDLR-201ENST00000382096 CRIPTQ9P021 101 aa9.92□□□□□ -0.82
VLDLR-201ENST00000382096 TRAV22A0A0B4J277 110 aa9.9□□□□□ -0.82
VLDLR-201ENST00000382096 LOC101927531A0A1B0GV80 90 aa9.9□□□□□ -0.82
VLDLR-201ENST00000382096 UQCRQO14949 82 aa9.84□□□□□ -0.83
VLDLR-201ENST00000382096 K7ERU9 68 aa9.83□□□□□ -0.84
VLDLR-201ENST00000382096 IMUPQ9GZP8 106 aa9.83□□□□□ -0.84
VLDLR-201ENST00000382096 H0Y9P7 68 aa9.79□□□□□ -0.84
VLDLR-201ENST00000382096 H0YAA0 97 aa9.78□□□□□ -0.84
VLDLR-201ENST00000382096 OCR1Q9BZK8 76 aa9.75□□□□□ -0.85
VLDLR-201ENST00000382096 NDUFC1O43677 76 aa9.74□□□□□ -0.85
VLDLR-201ENST00000382096 ATOX1O00244 68 aa9.73□□□□□ -0.85
VLDLR-201ENST00000382096 J3QR89 54 aa9.72□□□□□ -0.85
VLDLR-201ENST00000382096 SPRR2FQ96RM1 72 aa9.72□□□□□ -0.85
VLDLR-201ENST00000382096 SPRR2EP22531 72 aa9.71□□□□□ -0.86
VLDLR-201ENST00000382096 SPRR2BP35325 72 aa9.71□□□□□ -0.86
VLDLR-201ENST00000382096 SPRR2AP35326 72 aa9.71□□□□□ -0.86
VLDLR-201ENST00000382096 A8MUN3 132 aa9.66□□□□□ -0.86
VLDLR-201ENST00000382096 LINC00208Q96KT6 92 aa9.65□□□□□ -0.86
VLDLR-201ENST00000382096 ADM2Q7Z4H4 148 aa9.6□□□□□ -0.87
VLDLR-201ENST00000382096 KRTAP2-2Q9BYT5 123 aa9.58□□□□□ -0.88
VLDLR-201ENST00000382096 KRTAP2-1Q9BYU5 128 aa9.58□□□□□ -0.88
VLDLR-201ENST00000382096 MP68P56378 58 aa9.56□□□□□ -0.88
VLDLR-201ENST00000382096 LCE1AQ5T7P2 110 aa9.53□□□□□ -0.88
VLDLR-201ENST00000382096 PRO2289Q9P1D8 64 aa9.53□□□□□ -0.88
VLDLR-201ENST00000382096 MT-ATP8P03928 68 aa9.52□□□□□ -0.89
VLDLR-201ENST00000382096 MT1XP80297 61 aa9.51□□□□□ -0.89
VLDLR-201ENST00000382096 KRTAP8-1Q8IUC2 63 aa9.51□□□□□ -0.89
VLDLR-201ENST00000382096 H3BPC8 53 aa9.48□□□□□ -0.89
VLDLR-201ENST00000382096 SCGB1A1P11684 91 aa9.46□□□□□ -0.9
VLDLR-201ENST00000382096 PLAC4Q8WY50 150 aa9.42□□□□□ -0.9
VLDLR-201ENST00000382096 SPRR2DP22532 72 aa9.39□□□□□ -0.91
VLDLR-201ENST00000382096 PCP4P48539 62 aa9.39□□□□□ -0.91
VLDLR-201ENST00000382096 KRTAP12-2P59991 146 aa9.39□□□□□ -0.91
VLDLR-201ENST00000382096 P0C880 135 aa9.37□□□□□ -0.91
VLDLR-201ENST00000382096 R4GN34 69 aa9.37□□□□□ -0.91
VLDLR-201ENST00000382096 C20orf197Q8N268 126 aa9.35□□□□□ -0.91
VLDLR-201ENST00000382096 DMAC1Q96GE9 116 aa9.34□□□□□ -0.91
VLDLR-201ENST00000382096 TRAV7A0A075B6U4 112 aa9.31□□□□□ -0.92
VLDLR-201ENST00000382096 KRTAP3-2Q9BYR7 98 aa9.29□□□□□ -0.92
VLDLR-201ENST00000382096 M0QZ58 72 aa9.28□□□□□ -0.92
VLDLR-201ENST00000382096 SMIM20Q8N5G0 67 aa9.26□□□□□ -0.93
VLDLR-201ENST00000382096 KRTAP4-8A0A0G2JLE6 195 aa9.25□□□□□ -0.93
VLDLR-201ENST00000382096 KRTAP4-8Q9BYQ9 185 aa9.25□□□□□ -0.93
VLDLR-201ENST00000382096 LCE3BQ5TA77 95 aa9.19□□□□□ -0.94
VLDLR-201ENST00000382096 LINC01554Q52M75 96 aa9.12□□□□□ -0.95
VLDLR-201ENST00000382096 SNURFQ9Y675 71 aa9.12□□□□□ -0.95
VLDLR-201ENST00000382096 ACYP2P14621 99 aa9.1□□□□□ -0.95
VLDLR-201ENST00000382096 KRTAP10-7P60409 375 aaPredicted RBP9.05□□□□□ -0.96
VLDLR-201ENST00000382096 KRTAP10-12P60413 245 aa9.05□□□□□ -0.96
VLDLR-201ENST00000382096 SERP2Q8N6R1 65 aa9.05□□□□□ -0.96
VLDLR-201ENST00000382096 ANAPC13Q9BS18 74 aa9.02□□□□□ -0.97
VLDLR-201ENST00000382096 GPR98Q8WXG9 6306 aa8.96□□□□□ -0.98
VLDLR-201ENST00000382096 SPANXA2-OT1Q8N9U9 137 aa8.96□□□□□ -0.98
VLDLR-201ENST00000382096 SPTSSBQ8NFR3 76 aa8.94□□□□□ -0.98
VLDLR-201ENST00000382096 CHKB-CPT1BH3BT56 60 aa8.85□□□□□ -0.99
VLDLR-201ENST00000382096 DSTQ03001 7570 aaKnown RBP8.82□□□□□ -1
VLDLR-201ENST00000382096 COX7CP15954 63 aa8.81□□□□□ -1
VLDLR-201ENST00000382096 CCDC179H3BU77 68 aa8.78□□□□□ -1
VLDLR-201ENST00000382096 CYSTM1Q9H1C7 97 aa8.76□□□□□ -1.01
VLDLR-201ENST00000382096 COA5Q86WW8 74 aa8.71□□□□□ -1.02
VLDLR-201ENST00000382096 H7BZZ5 65 aa8.68□□□□□ -1.02
VLDLR-201ENST00000382096 KRTAP4-9Q9BYQ8 210 aa8.68□□□□□ -1.02
VLDLR-201ENST00000382096 KRTAP13-4Q3LI77 160 aa8.67□□□□□ -1.02
VLDLR-201ENST00000382096 LCE5AQ5TCM9 118 aa8.61□□□□□ -1.03
VLDLR-201ENST00000382096 TMEM258P61165 79 aa8.57□□□□□ -1.04
VLDLR-201ENST00000382096 CAMK2N1Q7Z7J9 78 aa8.56□□□□□ -1.04
VLDLR-201ENST00000382096 KRTAP19-7Q3SYF9 63 aa8.52□□□□□ -1.05
VLDLR-201ENST00000382096 KRTAP19-3Q7Z4W3 81 aa8.49□□□□□ -1.05
VLDLR-201ENST00000382096 RPS28P62857 69 aaKnown RBP8.46□□□□□ -1.06
VLDLR-201ENST00000382096 MT1EP04732 61 aa8.45□□□□□ -1.06
VLDLR-201ENST00000382096 LCE1DQ5T752 114 aa8.45□□□□□ -1.06
VLDLR-201ENST00000382096 ATP5EP56381 51 aaPredicted RBP8.42□□□□□ -1.06
VLDLR-201ENST00000382096 SERP1Q9Y6X1 66 aa8.38□□□□□ -1.07
VLDLR-201ENST00000382096 SEC61GP60059 68 aa8.37□□□□□ -1.07
VLDLR-201ENST00000382096 HMCN1Q96RW7 5635 aa8.36□□□□□ -1.07
VLDLR-201ENST00000382096 SPATA8Q6RVD6 105 aa8.34□□□□□ -1.07
VLDLR-201ENST00000382096 A0A1B0GU33 70 aa8.32□□□□□ -1.08
VLDLR-201ENST00000382096 A0A0D9SG42 100 aa8.31□□□□□ -1.08
VLDLR-201ENST00000382096 LCE4AQ5TA78 99 aa8.28□□□□□ -1.08
VLDLR-201ENST00000382096 MT4P47944 62 aa8.25□□□□□ -1.09
VLDLR-201ENST00000382096 MT1GP13640 62 aa8.23□□□□□ -1.09
VLDLR-201ENST00000382096 AHNAK2Q8IVF2 5795 aa8.21□□□□□ -1.1
VLDLR-201ENST00000382096 SPINT4Q6UDR6 99 aa8.21□□□□□ -1.1
VLDLR-201ENST00000382096 KRTAP12-1P59990 96 aa8.2□□□□□ -1.1
VLDLR-201ENST00000382096 KRTAP19-5Q3LI72 72 aa8.2□□□□□ -1.1
VLDLR-201ENST00000382096 A0A1B0GU69 56 aa8.19□□□□□ -1.1
VLDLR-201ENST00000382096 PP632Q6XCG6 107 aa8.16□□□□□ -1.1
VLDLR-201ENST00000382096 KRTAP5-10Q6L8G5 202 aa8.13□□□□□ -1.11
VLDLR-201ENST00000382096 SMIM26A0A096LP01 95 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms