RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 SNURFQ9Y675 71 aa7.82□□□□□ -1.16
SNRPB-201ENST00000381342 PCP4P48539 62 aa7.81□□□□□ -1.16
SNRPB-201ENST00000381342 MT2AP02795 61 aa7.77□□□□□ -1.17
SNRPB-201ENST00000381342 NDUFC1O43677 76 aa7.76□□□□□ -1.17
SNRPB-201ENST00000381342 KRTAP10-10P60014 251 aa7.76□□□□□ -1.17
SNRPB-201ENST00000381342 CYSTM1Q9H1C7 97 aa7.73□□□□□ -1.17
SNRPB-201ENST00000381342 S4R3F8 94 aa7.73□□□□□ -1.17
SNRPB-201ENST00000381342 MT1FP04733 61 aa7.72□□□□□ -1.17
SNRPB-201ENST00000381342 H7BZZ5 65 aa7.7□□□□□ -1.18
SNRPB-201ENST00000381342 LCA10Q71F78 164 aa7.68□□□□□ -1.18
SNRPB-201ENST00000381342 SPANXA2-OT1Q8N9U9 137 aa7.67□□□□□ -1.18
SNRPB-201ENST00000381342 KRTAP9-3Q9BYQ3 159 aa7.61□□□□□ -1.19
SNRPB-201ENST00000381342 TMEM258P61165 79 aa7.6□□□□□ -1.19
SNRPB-201ENST00000381342 A8MUN3 132 aa7.59□□□□□ -1.19
SNRPB-201ENST00000381342 CSAG1Q6PB30 78 aa7.59□□□□□ -1.19
SNRPB-201ENST00000381342 DMAC1Q96GE9 116 aa7.58□□□□□ -1.2
SNRPB-201ENST00000381342 ATP5EP56381 51 aaPredicted RBP7.57□□□□□ -1.2
SNRPB-201ENST00000381342 LCE2BO14633 110 aa7.56□□□□□ -1.2
SNRPB-201ENST00000381342 USH2AO75445 5202 aa7.53□□□□□ -1.2
SNRPB-201ENST00000381342 ACYP2P14621 99 aa7.49□□□□□ -1.21
SNRPB-201ENST00000381342 KRTAP19-1Q8IUB9 90 aa7.47□□□□□ -1.21
SNRPB-201ENST00000381342 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.44□□□□□ -1.22
SNRPB-201ENST00000381342 SSPOA2VEC9 5147 aa7.44□□□□□ -1.22
SNRPB-201ENST00000381342 COA5Q86WW8 74 aa7.4□□□□□ -1.22
SNRPB-201ENST00000381342 KRTAP9-7A8MTY7 169 aa7.38□□□□□ -1.23
SNRPB-201ENST00000381342 CHKB-CPT1BH3BT56 60 aa7.35□□□□□ -1.23
SNRPB-201ENST00000381342 SERP1Q9Y6X1 66 aa7.35□□□□□ -1.23
SNRPB-201ENST00000381342 KRTAP19-6Q3LI70 58 aa7.34□□□□□ -1.23
SNRPB-201ENST00000381342 H0YAA0 97 aa7.33□□□□□ -1.24
SNRPB-201ENST00000381342 FCGBPQ9Y6R7 5405 aaPredicted RBP7.32□□□□□ -1.24
SNRPB-201ENST00000381342 ADM2Q7Z4H4 148 aa7.3□□□□□ -1.24
SNRPB-201ENST00000381342 SPTSSBQ8NFR3 76 aa7.29□□□□□ -1.24
SNRPB-201ENST00000381342 SPRR2GQ9BYE4 73 aa7.27□□□□□ -1.25
SNRPB-201ENST00000381342 RPS28P62857 69 aaKnown RBP7.26□□□□□ -1.25
SNRPB-201ENST00000381342 CRIPTQ9P021 101 aa7.22□□□□□ -1.25
SNRPB-201ENST00000381342 P0C880 135 aa7.19□□□□□ -1.26
SNRPB-201ENST00000381342 KRTAP19-8Q3LI54 63 aa7.17□□□□□ -1.26
SNRPB-201ENST00000381342 Q5VV11 94 aa7.17□□□□□ -1.26
SNRPB-201ENST00000381342 MT1BP07438 61 aa7.16□□□□□ -1.26
SNRPB-201ENST00000381342 SMIM26A0A096LP01 95 aa7.12□□□□□ -1.27
SNRPB-201ENST00000381342 A6NN06 94 aa7.09□□□□□ -1.27
SNRPB-201ENST00000381342 R4GN34 69 aa7.08□□□□□ -1.28
SNRPB-201ENST00000381342 MACF1Q9UPN3 7388 aaKnown RBP7.07□□□□□ -1.28
SNRPB-201ENST00000381342 M0QZ58 72 aa7.06□□□□□ -1.28
SNRPB-201ENST00000381342 SVIPQ8NHG7 77 aa7.06□□□□□ -1.28
SNRPB-201ENST00000381342 LINC01558Q9Y6Z2 57 aa7.06□□□□□ -1.28
SNRPB-201ENST00000381342 V9GYY9 64 aa7.05□□□□□ -1.28
SNRPB-201ENST00000381342 Q1T7F1 81 aa7.04□□□□□ -1.28
SNRPB-201ENST00000381342 SEC61GP60059 68 aa7.01□□□□□ -1.29
SNRPB-201ENST00000381342 A0A1B0GU69 56 aa6.99□□□□□ -1.29
SNRPB-201ENST00000381342 KRTAP6-3Q3LI67 103 aa6.99□□□□□ -1.29
SNRPB-201ENST00000381342 SYNE2Q8WXH0 6885 aaKnown RBP6.99□□□□□ -1.29
SNRPB-201ENST00000381342 PRR15LQ9BU68 103 aa6.98□□□□□ -1.29
SNRPB-201ENST00000381342 LINC01554Q52M75 96 aa6.95□□□□□ -1.3
SNRPB-201ENST00000381342 KRTAP10-5P60370 271 aa6.94□□□□□ -1.3
SNRPB-201ENST00000381342 PLAC4Q8WY50 150 aa6.88□□□□□ -1.31
SNRPB-201ENST00000381342 PSPHP1O15172 72 aa6.87□□□□□ -1.31
SNRPB-201ENST00000381342 KRTAP13-4Q3LI77 160 aa6.86□□□□□ -1.31
SNRPB-201ENST00000381342 A0A1B0GU33 70 aa6.84□□□□□ -1.31
SNRPB-201ENST00000381342 PRO2289Q9P1D8 64 aa6.8□□□□□ -1.32
SNRPB-201ENST00000381342 MT1XP80297 61 aa6.79□□□□□ -1.32
SNRPB-201ENST00000381342 UQCR11O14957 56 aa6.76□□□□□ -1.33
SNRPB-201ENST00000381342 SPATA8Q6RVD6 105 aa6.71□□□□□ -1.34
SNRPB-201ENST00000381342 A6NED7 52 aa6.69□□□□□ -1.34
SNRPB-201ENST00000381342 A0A0D9SG42 100 aa6.68□□□□□ -1.34
SNRPB-201ENST00000381342 MIR22HGQ0VDD5 57 aa6.65□□□□□ -1.34
SNRPB-201ENST00000381342 KRTAP5-9P26371 169 aa6.63□□□□□ -1.35
SNRPB-201ENST00000381342 A8MU10 97 aa6.58□□□□□ -1.36
SNRPB-201ENST00000381342 CDC42SE1Q9NRR8 79 aa6.57□□□□□ -1.36
SNRPB-201ENST00000381342 NEBP20929 6669 aa6.57□□□□□ -1.36
SNRPB-201ENST00000381342 MUC12Q9UKN1 5478 aa6.56□□□□□ -1.36
SNRPB-201ENST00000381342 CAMK2N1Q7Z7J9 78 aa6.56□□□□□ -1.36
SNRPB-201ENST00000381342 SPINT4Q6UDR6 99 aa6.54□□□□□ -1.36
SNRPB-201ENST00000381342 KRTAP12-1P59990 96 aa6.53□□□□□ -1.36
SNRPB-201ENST00000381342 KRTAP12-2P59991 146 aa6.53□□□□□ -1.36
SNRPB-201ENST00000381342 KRTAP20-1Q3LI63 56 aa6.5□□□□□ -1.37
SNRPB-201ENST00000381342 KRTAP8-1Q8IUC2 63 aa6.5□□□□□ -1.37
SNRPB-201ENST00000381342 SPRR2FQ96RM1 72 aa6.5□□□□□ -1.37
SNRPB-201ENST00000381342 KMT2DO14686 5537 aa6.49□□□□□ -1.37
SNRPB-201ENST00000381342 KRTAP10-7P60409 375 aaPredicted RBP6.49□□□□□ -1.37
SNRPB-201ENST00000381342 BRK1Q8WUW1 75 aa6.46□□□□□ -1.38
SNRPB-201ENST00000381342 KRTAP10-12P60413 245 aa6.43□□□□□ -1.38
SNRPB-201ENST00000381342 K7ERS5 55 aa6.41□□□□□ -1.38
SNRPB-201ENST00000381342 SPRR2EP22531 72 aa6.41□□□□□ -1.38
SNRPB-201ENST00000381342 SPRR2BP35325 72 aa6.41□□□□□ -1.38
SNRPB-201ENST00000381342 SPRR2AP35326 72 aa6.41□□□□□ -1.38
SNRPB-201ENST00000381342 KRTAP4-8A0A0G2JLE6 195 aa6.39□□□□□ -1.39
SNRPB-201ENST00000381342 KRTAP4-8Q9BYQ9 185 aa6.39□□□□□ -1.39
SNRPB-201ENST00000381342 MDN1Q9NU22 5596 aa6.37□□□□□ -1.39
SNRPB-201ENST00000381342 KRTAP2-3P0C7H8 128 aa6.34□□□□□ -1.39
SNRPB-201ENST00000381342 KRTAP2-4Q9BYR9 128 aa6.34□□□□□ -1.39
SNRPB-201ENST00000381342 LCE1AQ5T7P2 110 aa6.26□□□□□ -1.41
SNRPB-201ENST00000381342 PRO0628Q9UI54 55 aa6.25□□□□□ -1.41
SNRPB-201ENST00000381342 C10orf95Q9H7T3 257 aa6.22□□□□□ -1.41
SNRPB-201ENST00000381342 SPRR2DP22532 72 aa6.21□□□□□ -1.42
SNRPB-201ENST00000381342 LOC100996750A0A140TA64 210 aa6.19□□□□□ -1.42
SNRPB-201ENST00000381342 KRTAP4-6Q9BYQ5 205 aa6.19□□□□□ -1.42
SNRPB-201ENST00000381342 KRTAP2-2Q9BYT5 123 aa6.14□□□□□ -1.43
SNRPB-201ENST00000381342 KRTAP2-1Q9BYU5 128 aa6.14□□□□□ -1.43
SNRPB-201ENST00000381342 TNP1P09430 55 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms