RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 BRK1Q8WUW1 75 aa10.8□□□□□ -0.68
GMDS-202ENST00000380815 HERC1Q15751 4861 aa10.8□□□□□ -0.68
GMDS-202ENST00000380815 S4R3F8 94 aa10.76□□□□□ -0.69
GMDS-202ENST00000380815 LCA10Q71F78 164 aa10.75□□□□□ -0.69
GMDS-202ENST00000380815 KRTAP4-1Q9BYQ7 146 aa10.75□□□□□ -0.69
GMDS-202ENST00000380815 KRTAP3-3Q9BYR6 98 aa10.73□□□□□ -0.69
GMDS-202ENST00000380815 A6NED7 52 aa10.72□□□□□ -0.69
GMDS-202ENST00000380815 MUC17Q685J3 4493 aa10.72□□□□□ -0.69
GMDS-202ENST00000380815 SEC61GP60059 68 aa10.71□□□□□ -0.69
GMDS-202ENST00000380815 HMCN2Q8NDA2 5059 aa10.71□□□□□ -0.7
GMDS-202ENST00000380815 PRO0628Q9UI54 55 aa10.66□□□□□ -0.7
GMDS-202ENST00000380815 CDC42SE1Q9NRR8 79 aa10.54□□□□□ -0.72
GMDS-202ENST00000380815 KRTAP19-2Q3LHN2 52 aa10.52□□□□□ -0.72
GMDS-202ENST00000380815 UQCR11O14957 56 aa10.52□□□□□ -0.73
GMDS-202ENST00000380815 CSAG1Q6PB30 78 aa10.51□□□□□ -0.73
GMDS-202ENST00000380815 A8MU10 97 aa10.47□□□□□ -0.73
GMDS-202ENST00000380815 A0A1B0GU33 70 aa10.42□□□□□ -0.74
GMDS-202ENST00000380815 SPATA8Q6RVD6 105 aa10.42□□□□□ -0.74
GMDS-202ENST00000380815 MIR22HGQ0VDD5 57 aa10.42□□□□□ -0.74
GMDS-202ENST00000380815 MUC2Q02817 5179 aa10.42□□□□□ -0.74
GMDS-202ENST00000380815 KRTAP10-6P60371 365 aaPredicted RBP10.4□□□□□ -0.74
GMDS-202ENST00000380815 KRTAP3-2Q9BYR7 98 aa10.4□□□□□ -0.74
GMDS-202ENST00000380815 H0YAA0 97 aa10.31□□□□□ -0.76
GMDS-202ENST00000380815 ADM2Q7Z4H4 148 aa10.31□□□□□ -0.76
GMDS-202ENST00000380815 SVIPQ8NHG7 77 aa10.31□□□□□ -0.76
GMDS-202ENST00000380815 P0C880 135 aa10.29□□□□□ -0.76
GMDS-202ENST00000380815 FLGP20930 4061 aaPredicted RBP10.23□□□□□ -0.77
GMDS-202ENST00000380815 PMAIP1Q13794 54 aa10.22□□□□□ -0.77
GMDS-202ENST00000380815 UBR4Q5T4S7 5183 aa10.22□□□□□ -0.77
GMDS-202ENST00000380815 LCE2CQ5TA81 110 aa10.19□□□□□ -0.78
GMDS-202ENST00000380815 KRTAP13-4Q3LI77 160 aa10.14□□□□□ -0.79
GMDS-202ENST00000380815 RNF213Q63HN8 5207 aa10.13□□□□□ -0.79
GMDS-202ENST00000380815 A6NN06 94 aa10.06□□□□□ -0.8
GMDS-202ENST00000380815 M0QZ58 72 aa10.06□□□□□ -0.8
GMDS-202ENST00000380815 A0A0D9SG42 100 aa9.96□□□□□ -0.81
GMDS-202ENST00000380815 MT1HP80294 61 aa9.96□□□□□ -0.81
GMDS-202ENST00000380815 FAT4Q6V0I7 4981 aa9.96□□□□□ -0.82
GMDS-202ENST00000380815 K7ERS5 55 aa9.95□□□□□ -0.82
GMDS-202ENST00000380815 R4GN34 69 aa9.93□□□□□ -0.82
GMDS-202ENST00000380815 LORP23490 312 aaPredicted RBP9.91□□□□□ -0.82
GMDS-202ENST00000380815 M0R2T5 61 aa9.88□□□□□ -0.83
GMDS-202ENST00000380815 KTN1-AS1Q86SY8 53 aa9.84□□□□□ -0.83
GMDS-202ENST00000380815 CRIPTQ9P021 101 aa9.8□□□□□ -0.84
GMDS-202ENST00000380815 KRTAP12-1P59990 96 aa9.77□□□□□ -0.85
GMDS-202ENST00000380815 KRTAP12-2P59991 146 aa9.75□□□□□ -0.85
GMDS-202ENST00000380815 LINC01554Q52M75 96 aa9.75□□□□□ -0.85
GMDS-202ENST00000380815 SPINT4Q6UDR6 99 aa9.71□□□□□ -0.85
GMDS-202ENST00000380815 KRTAP9-8Q9BYQ0 159 aa9.63□□□□□ -0.87
GMDS-202ENST00000380815 MT2AP02795 61 aa9.62□□□□□ -0.87
GMDS-202ENST00000380815 MT1FP04733 61 aa9.57□□□□□ -0.88
GMDS-202ENST00000380815 KRTAP10-10P60014 251 aa9.55□□□□□ -0.88
GMDS-202ENST00000380815 SPRR2GQ9BYE4 73 aa9.54□□□□□ -0.88
GMDS-202ENST00000380815 ROMO1P60602 79 aa9.53□□□□□ -0.88
GMDS-202ENST00000380815 PRAC1Q96KF2 57 aa9.51□□□□□ -0.89
GMDS-202ENST00000380815 KRTAP19-1Q8IUB9 90 aa9.49□□□□□ -0.89
GMDS-202ENST00000380815 LCE2AQ5TA79 106 aaPredicted RBP9.44□□□□□ -0.9
GMDS-202ENST00000380815 CAMK2N1Q7Z7J9 78 aa9.32□□□□□ -0.92
GMDS-202ENST00000380815 KRTAP9-3Q9BYQ3 159 aa9.28□□□□□ -0.92
GMDS-202ENST00000380815 PLAC4Q8WY50 150 aa9.26□□□□□ -0.93
GMDS-202ENST00000380815 KRTAP19-8Q3LI54 63 aa9.25□□□□□ -0.93
GMDS-202ENST00000380815 KRTAP25-1Q3LHN0 102 aa9.24□□□□□ -0.93
GMDS-202ENST00000380815 C10orf95Q9H7T3 257 aa9.23□□□□□ -0.93
GMDS-202ENST00000380815 MT1BP07438 61 aa9.1□□□□□ -0.95
GMDS-202ENST00000380815 LCE2BO14633 110 aa8.98□□□□□ -0.97
GMDS-202ENST00000380815 TNP1P09430 55 aa8.91□□□□□ -0.98
GMDS-202ENST00000380815 MT1XP80297 61 aa8.86□□□□□ -0.99
GMDS-202ENST00000380815 KRTAP10-5P60370 271 aa8.85□□□□□ -0.99
GMDS-202ENST00000380815 PP632Q6XCG6 107 aa8.77□□□□□ -1.01
GMDS-202ENST00000380815 PRO2289Q9P1D8 64 aa8.74□□□□□ -1.01
GMDS-202ENST00000380815 KRTAP23-1A1A580 65 aa8.72□□□□□ -1.01
GMDS-202ENST00000380815 USH2AO75445 5202 aa8.65□□□□□ -1.03
GMDS-202ENST00000380815 KRTAP10-7P60409 375 aaPredicted RBP8.5□□□□□ -1.05
GMDS-202ENST00000380815 LCE3AQ5TA76 89 aa8.49□□□□□ -1.05
GMDS-202ENST00000380815 LCE2DQ5TA82 110 aaPredicted RBP8.49□□□□□ -1.05
GMDS-202ENST00000380815 KRTAP10-12P60413 245 aa8.47□□□□□ -1.05
GMDS-202ENST00000380815 KRTAP19-6Q3LI70 58 aa8.39□□□□□ -1.07
GMDS-202ENST00000380815 SSPOA2VEC9 5147 aa8.36□□□□□ -1.07
GMDS-202ENST00000380815 KRTAP8-1Q8IUC2 63 aa8.35□□□□□ -1.07
GMDS-202ENST00000380815 FSIP2Q5CZC0 6907 aa8.22□□□□□ -1.09
GMDS-202ENST00000380815 KRTAP15-1Q3LI76 137 aa8.21□□□□□ -1.1
GMDS-202ENST00000380815 KRTAP12-3P60328 96 aa8.16□□□□□ -1.1
GMDS-202ENST00000380815 KRTAP4-8A0A0G2JLE6 195 aa8.12□□□□□ -1.11
GMDS-202ENST00000380815 KRTAP4-8Q9BYQ9 185 aa8.12□□□□□ -1.11
GMDS-202ENST00000380815 KRTAP19-5Q3LI72 72 aa8.05□□□□□ -1.12
GMDS-202ENST00000380815 KRTAP9-2Q9BYQ4 174 aa8.04□□□□□ -1.12
GMDS-202ENST00000380815 KMT2DO14686 5537 aa8.03□□□□□ -1.12
GMDS-202ENST00000380815 FCGBPQ9Y6R7 5405 aaPredicted RBP7.95□□□□□ -1.14
GMDS-202ENST00000380815 KRTAP19-7Q3SYF9 63 aa7.91□□□□□ -1.14
GMDS-202ENST00000380815 SPRR5A0A1B0GTR4 108 aa7.86□□□□□ -1.15
GMDS-202ENST00000380815 CRCT1Q9UGL9 99 aa7.79□□□□□ -1.16
GMDS-202ENST00000380815 LUZP6Q538Z0 58 aa7.76□□□□□ -1.17
GMDS-202ENST00000380815 MT1EP04732 61 aa7.75□□□□□ -1.17
GMDS-202ENST00000380815 NDUFAF8A1L188 74 aa7.73□□□□□ -1.17
GMDS-202ENST00000380815 LCE3CQ5T5A8 94 aa7.64□□□□□ -1.19
GMDS-202ENST00000380815 KRTAP19-4Q3LI73 84 aa7.64□□□□□ -1.19
GMDS-202ENST00000380815 MT1LQ93083 61 aa7.62□□□□□ -1.19
GMDS-202ENST00000380815 MACF1Q9UPN3 7388 aaKnown RBP7.56□□□□□ -1.2
GMDS-202ENST00000380815 SPRR2FQ96RM1 72 aa7.46□□□□□ -1.21
GMDS-202ENST00000380815 KRTAP19-3Q7Z4W3 81 aa7.41□□□□□ -1.22
GMDS-202ENST00000380815 KRTAP4-7Q9BYR0 210 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms