RNA–Protein interactions for RNA: ENST00000379412.9

LDHA-203, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LDHA, Length 1,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-203ENST00000379412 CDC42SE1Q9NRR8 79 aa7.57□□□□□ -1.2
LDHA-203ENST00000379412 HERC1Q15751 4861 aa7.53□□□□□ -1.2
LDHA-203ENST00000379412 SEC61BP60468 96 aaKnown RBP7.52□□□□□ -1.21
LDHA-203ENST00000379412 LCA10Q71F78 164 aa7.52□□□□□ -1.21
LDHA-203ENST00000379412 UQCR11O14957 56 aa7.5□□□□□ -1.21
LDHA-203ENST00000379412 RBM12B-AS1Q9P1G2 102 aa7.48□□□□□ -1.21
LDHA-203ENST00000379412 H1FX-AS1Q4G0G2 97 aa7.47□□□□□ -1.21
LDHA-203ENST00000379412 S4R3F8 94 aa7.46□□□□□ -1.22
LDHA-203ENST00000379412 SPATA8Q6RVD6 105 aa7.44□□□□□ -1.22
LDHA-203ENST00000379412 A8MU10 97 aa7.42□□□□□ -1.22
LDHA-203ENST00000379412 MIR22HGQ0VDD5 57 aa7.41□□□□□ -1.22
LDHA-203ENST00000379412 KRTAP3-3Q9BYR6 98 aa7.4□□□□□ -1.22
LDHA-203ENST00000379412 LRP2P98164 4655 aa7.36□□□□□ -1.23
LDHA-203ENST00000379412 A0A1B0GU33 70 aa7.35□□□□□ -1.23
LDHA-203ENST00000379412 PMAIP1Q13794 54 aa7.35□□□□□ -1.23
LDHA-203ENST00000379412 LCE2DQ5TA82 110 aaPredicted RBP7.35□□□□□ -1.23
LDHA-203ENST00000379412 CSAG1Q6PB30 78 aa7.29□□□□□ -1.24
LDHA-203ENST00000379412 LPAP08519 4548 aa7.27□□□□□ -1.25
LDHA-203ENST00000379412 A6NN06 94 aa7.25□□□□□ -1.25
LDHA-203ENST00000379412 H0YAA0 97 aa7.23□□□□□ -1.25
LDHA-203ENST00000379412 KRTAP10-6P60371 365 aaPredicted RBP7.23□□□□□ -1.25
LDHA-203ENST00000379412 HMCN2Q8NDA2 5059 aa7.22□□□□□ -1.25
LDHA-203ENST00000379412 KRTAP3-2Q9BYR7 98 aa7.21□□□□□ -1.25
LDHA-203ENST00000379412 KRTAP4-1Q9BYQ7 146 aa7.2□□□□□ -1.26
LDHA-203ENST00000379412 ADM2Q7Z4H4 148 aa7.14□□□□□ -1.27
LDHA-203ENST00000379412 KTN1-AS1Q86SY8 53 aa7.13□□□□□ -1.27
LDHA-203ENST00000379412 MUC17Q685J3 4493 aa7.11□□□□□ -1.27
LDHA-203ENST00000379412 K7ERS5 55 aa7.11□□□□□ -1.27
LDHA-203ENST00000379412 P0C880 135 aa7.11□□□□□ -1.27
LDHA-203ENST00000379412 UBR4Q5T4S7 5183 aa7.09□□□□□ -1.27
LDHA-203ENST00000379412 KRTAP19-2Q3LHN2 52 aa7.09□□□□□ -1.27
LDHA-203ENST00000379412 LOC100996750A0A140TA64 210 aa7.07□□□□□ -1.28
LDHA-203ENST00000379412 KRTAP4-6Q9BYQ5 205 aa7.07□□□□□ -1.28
LDHA-203ENST00000379412 M0QZ58 72 aa7.06□□□□□ -1.28
LDHA-203ENST00000379412 KRTAP13-4Q3LI77 160 aa7.03□□□□□ -1.28
LDHA-203ENST00000379412 A0A0D9SG42 100 aa6.94□□□□□ -1.3
LDHA-203ENST00000379412 RNF213Q63HN8 5207 aa6.9□□□□□ -1.3
LDHA-203ENST00000379412 R4GN34 69 aa6.9□□□□□ -1.3
LDHA-203ENST00000379412 KRTAP12-1P59990 96 aa6.82□□□□□ -1.32
LDHA-203ENST00000379412 LCE2CQ5TA81 110 aa6.82□□□□□ -1.32
LDHA-203ENST00000379412 FLGP20930 4061 aaPredicted RBP6.82□□□□□ -1.32
LDHA-203ENST00000379412 CRIPTQ9P021 101 aa6.8□□□□□ -1.32
LDHA-203ENST00000379412 ROMO1P60602 79 aa6.8□□□□□ -1.32
LDHA-203ENST00000379412 KRTAP12-2P59991 146 aa6.79□□□□□ -1.32
LDHA-203ENST00000379412 SPINT4Q6UDR6 99 aa6.79□□□□□ -1.32
LDHA-203ENST00000379412 PRAC1Q96KF2 57 aa6.78□□□□□ -1.32
LDHA-203ENST00000379412 MUC2Q02817 5179 aa6.76□□□□□ -1.33
LDHA-203ENST00000379412 LORP23490 312 aaPredicted RBP6.74□□□□□ -1.33
LDHA-203ENST00000379412 LINC01554Q52M75 96 aa6.73□□□□□ -1.33
LDHA-203ENST00000379412 MT1HP80294 61 aa6.68□□□□□ -1.34
LDHA-203ENST00000379412 M0R2T5 61 aa6.67□□□□□ -1.34
LDHA-203ENST00000379412 KRTAP25-1Q3LHN0 102 aa6.64□□□□□ -1.35
LDHA-203ENST00000379412 SPRR2GQ9BYE4 73 aa6.53□□□□□ -1.36
LDHA-203ENST00000379412 FAT4Q6V0I7 4981 aa6.5□□□□□ -1.37
LDHA-203ENST00000379412 CAMK2N1Q7Z7J9 78 aa6.5□□□□□ -1.37
LDHA-203ENST00000379412 MT2AP02795 61 aa6.48□□□□□ -1.37
LDHA-203ENST00000379412 KRTAP9-8Q9BYQ0 159 aa6.46□□□□□ -1.37
LDHA-203ENST00000379412 KRTAP10-10P60014 251 aa6.46□□□□□ -1.38
LDHA-203ENST00000379412 KRTAP19-1Q8IUB9 90 aa6.44□□□□□ -1.38
LDHA-203ENST00000379412 MT1FP04733 61 aa6.42□□□□□ -1.38
LDHA-203ENST00000379412 C10orf95Q9H7T3 257 aa6.42□□□□□ -1.38
LDHA-203ENST00000379412 LCE2AQ5TA79 106 aaPredicted RBP6.4□□□□□ -1.38
LDHA-203ENST00000379412 PLAC4Q8WY50 150 aa6.4□□□□□ -1.39
LDHA-203ENST00000379412 KRTAP19-8Q3LI54 63 aa6.31□□□□□ -1.4
LDHA-203ENST00000379412 PP632Q6XCG6 107 aa6.27□□□□□ -1.41
LDHA-203ENST00000379412 TNP1P09430 55 aa6.25□□□□□ -1.41
LDHA-203ENST00000379412 KRTAP9-3Q9BYQ3 159 aa6.23□□□□□ -1.41
LDHA-203ENST00000379412 KRTAP23-1A1A580 65 aa6.2□□□□□ -1.42
LDHA-203ENST00000379412 KRTAP9-2Q9BYQ4 174 aa6.19□□□□□ -1.42
LDHA-203ENST00000379412 MT1BP07438 61 aa6.16□□□□□ -1.42
LDHA-203ENST00000379412 PRO2289Q9P1D8 64 aa6.03□□□□□ -1.44
LDHA-203ENST00000379412 KRTAP10-5P60370 271 aa6.02□□□□□ -1.45
LDHA-203ENST00000379412 MT1XP80297 61 aa6.02□□□□□ -1.45
LDHA-203ENST00000379412 KRTAP4-8Q9BYQ9 185 aa6.01□□□□□ -1.45
LDHA-203ENST00000379412 LCE2BO14633 110 aa5.98□□□□□ -1.45
LDHA-203ENST00000379412 FSIP2Q5CZC0 6907 aa5.97□□□□□ -1.45
LDHA-203ENST00000379412 KRTAP9-6A0A140TA67 174 aa5.95□□□□□ -1.46
LDHA-203ENST00000379412 KRTAP15-1Q3LI76 137 aa5.91□□□□□ -1.46
LDHA-203ENST00000379412 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.9□□□□□ -1.46
LDHA-203ENST00000379412 LCE3AQ5TA76 89 aa5.86□□□□□ -1.47
LDHA-203ENST00000379412 CRCT1Q9UGL9 99 aa5.86□□□□□ -1.47
LDHA-203ENST00000379412 KRTAP10-12P60413 245 aa5.84□□□□□ -1.48
LDHA-203ENST00000379412 KRTAP8-1Q8IUC2 63 aa5.82□□□□□ -1.48
LDHA-203ENST00000379412 KRTAP4-8A0A0G2JLE6 195 aa5.77□□□□□ -1.49
LDHA-203ENST00000379412 KRTAP10-7P60409 375 aaPredicted RBP5.77□□□□□ -1.49
LDHA-203ENST00000379412 KRTAP5-3Q6L8H2 238 aa5.72□□□□□ -1.49
LDHA-203ENST00000379412 USH2AO75445 5202 aa5.69□□□□□ -1.5
LDHA-203ENST00000379412 KRTAP12-3P60328 96 aa5.66□□□□□ -1.5
LDHA-203ENST00000379412 KRTAP4-7Q9BYR0 210 aa5.66□□□□□ -1.5
LDHA-203ENST00000379412 LCE3BQ5TA77 95 aa5.64□□□□□ -1.51
LDHA-203ENST00000379412 SSPOA2VEC9 5147 aa5.63□□□□□ -1.51
LDHA-203ENST00000379412 KRTAP19-6Q3LI70 58 aa5.61□□□□□ -1.51
LDHA-203ENST00000379412 SPRR5A0A1B0GTR4 108 aa5.6□□□□□ -1.51
LDHA-203ENST00000379412 LUZP6Q538Z0 58 aa5.6□□□□□ -1.51
LDHA-203ENST00000379412 NDUFAF8A1L188 74 aa5.56□□□□□ -1.52
LDHA-203ENST00000379412 KRTAP9-9Q9BYP9 154 aa5.55□□□□□ -1.52
LDHA-203ENST00000379412 KRTAP9-4Q9BYQ2 154 aa5.55□□□□□ -1.52
LDHA-203ENST00000379412 FCGBPQ9Y6R7 5405 aaPredicted RBP5.51□□□□□ -1.53
LDHA-203ENST00000379412 KRTAP19-5Q3LI72 72 aa5.5□□□□□ -1.53
LDHA-203ENST00000379412 KRTAP19-4Q3LI73 84 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms