RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 MUC17Q685J3 4493 aa8.72□□□□□ -1.01
THUMPD2-201ENST00000378727 RBM12B-AS1Q9P1G2 102 aa8.7□□□□□ -1.02
THUMPD2-201ENST00000378727 SPTSSBQ8NFR3 76 aa8.69□□□□□ -1.02
THUMPD2-201ENST00000378727 H1FX-AS1Q4G0G2 97 aa8.68□□□□□ -1.02
THUMPD2-201ENST00000378727 LCA10Q71F78 164 aa8.67□□□□□ -1.02
THUMPD2-201ENST00000378727 KRTAP3-3Q9BYR6 98 aa8.67□□□□□ -1.02
THUMPD2-201ENST00000378727 SVIPQ8NHG7 77 aa8.65□□□□□ -1.02
THUMPD2-201ENST00000378727 S4R3F8 94 aa8.65□□□□□ -1.03
THUMPD2-201ENST00000378727 A0A1B0GU69 56 aa8.63□□□□□ -1.03
THUMPD2-201ENST00000378727 KRTAP19-2Q3LHN2 52 aa8.55□□□□□ -1.04
THUMPD2-201ENST00000378727 MUC2Q02817 5179 aa8.52□□□□□ -1.05
THUMPD2-201ENST00000378727 BRK1Q8WUW1 75 aa8.52□□□□□ -1.05
THUMPD2-201ENST00000378727 A6NED7 52 aa8.5□□□□□ -1.05
THUMPD2-201ENST00000378727 SEC61GP60059 68 aa8.5□□□□□ -1.05
THUMPD2-201ENST00000378727 A8MU10 97 aa8.45□□□□□ -1.06
THUMPD2-201ENST00000378727 CSAG1Q6PB30 78 aa8.42□□□□□ -1.06
THUMPD2-201ENST00000378727 PRO0628Q9UI54 55 aa8.41□□□□□ -1.06
THUMPD2-201ENST00000378727 KRTAP3-2Q9BYR7 98 aa8.39□□□□□ -1.07
THUMPD2-201ENST00000378727 KRTAP10-6P60371 365 aaPredicted RBP8.39□□□□□ -1.07
THUMPD2-201ENST00000378727 UQCR11O14957 56 aa8.38□□□□□ -1.07
THUMPD2-201ENST00000378727 CDC42SE1Q9NRR8 79 aa8.38□□□□□ -1.07
THUMPD2-201ENST00000378727 UBR4Q5T4S7 5183 aa8.37□□□□□ -1.07
THUMPD2-201ENST00000378727 A0A1B0GU33 70 aa8.34□□□□□ -1.07
THUMPD2-201ENST00000378727 SPATA8Q6RVD6 105 aa8.32□□□□□ -1.08
THUMPD2-201ENST00000378727 P0C880 135 aa8.31□□□□□ -1.08
THUMPD2-201ENST00000378727 MIR22HGQ0VDD5 57 aa8.31□□□□□ -1.08
THUMPD2-201ENST00000378727 RNF213Q63HN8 5207 aa8.3□□□□□ -1.08
THUMPD2-201ENST00000378727 ADM2Q7Z4H4 148 aa8.3□□□□□ -1.08
THUMPD2-201ENST00000378727 LCE2CQ5TA81 110 aa8.3□□□□□ -1.08
THUMPD2-201ENST00000378727 FLGP20930 4061 aaPredicted RBP8.29□□□□□ -1.08
THUMPD2-201ENST00000378727 H0YAA0 97 aa8.27□□□□□ -1.09
THUMPD2-201ENST00000378727 LCE2DQ5TA82 110 aaPredicted RBP8.22□□□□□ -1.09
THUMPD2-201ENST00000378727 KRTAP13-4Q3LI77 160 aa8.19□□□□□ -1.1
THUMPD2-201ENST00000378727 FAT4Q6V0I7 4981 aa8.16□□□□□ -1.1
THUMPD2-201ENST00000378727 MT1HP80294 61 aa8.1□□□□□ -1.11
THUMPD2-201ENST00000378727 LORP23490 312 aaPredicted RBP8.06□□□□□ -1.12
THUMPD2-201ENST00000378727 PMAIP1Q13794 54 aa8.04□□□□□ -1.12
THUMPD2-201ENST00000378727 M0QZ58 72 aa8.03□□□□□ -1.12
THUMPD2-201ENST00000378727 A0A0D9SG42 100 aa8.02□□□□□ -1.13
THUMPD2-201ENST00000378727 A6NN06 94 aa8.01□□□□□ -1.13
THUMPD2-201ENST00000378727 M0R2T5 61 aa7.99□□□□□ -1.13
THUMPD2-201ENST00000378727 R4GN34 69 aa7.97□□□□□ -1.13
THUMPD2-201ENST00000378727 KRTAP12-1P59990 96 aa7.86□□□□□ -1.15
THUMPD2-201ENST00000378727 KRTAP12-2P59991 146 aa7.86□□□□□ -1.15
THUMPD2-201ENST00000378727 LINC01554Q52M75 96 aa7.86□□□□□ -1.15
THUMPD2-201ENST00000378727 K7ERS5 55 aa7.85□□□□□ -1.15
THUMPD2-201ENST00000378727 KRTAP9-8Q9BYQ0 159 aa7.83□□□□□ -1.16
THUMPD2-201ENST00000378727 CRIPTQ9P021 101 aa7.82□□□□□ -1.16
THUMPD2-201ENST00000378727 MT2AP02795 61 aa7.81□□□□□ -1.16
THUMPD2-201ENST00000378727 SPINT4Q6UDR6 99 aa7.8□□□□□ -1.16
THUMPD2-201ENST00000378727 MT1FP04733 61 aa7.78□□□□□ -1.16
THUMPD2-201ENST00000378727 KTN1-AS1Q86SY8 53 aa7.74□□□□□ -1.17
THUMPD2-201ENST00000378727 KRTAP10-10P60014 251 aa7.72□□□□□ -1.17
THUMPD2-201ENST00000378727 LCE2AQ5TA79 106 aaPredicted RBP7.69□□□□□ -1.18
THUMPD2-201ENST00000378727 KRTAP19-1Q8IUB9 90 aa7.69□□□□□ -1.18
THUMPD2-201ENST00000378727 SPRR2GQ9BYE4 73 aa7.69□□□□□ -1.18
THUMPD2-201ENST00000378727 ROMO1P60602 79 aa7.6□□□□□ -1.19
THUMPD2-201ENST00000378727 PRAC1Q96KF2 57 aa7.58□□□□□ -1.2
THUMPD2-201ENST00000378727 KRTAP9-3Q9BYQ3 159 aa7.53□□□□□ -1.2
THUMPD2-201ENST00000378727 KRTAP19-8Q3LI54 63 aa7.47□□□□□ -1.21
THUMPD2-201ENST00000378727 CAMK2N1Q7Z7J9 78 aa7.47□□□□□ -1.21
THUMPD2-201ENST00000378727 C10orf95Q9H7T3 257 aa7.45□□□□□ -1.22
THUMPD2-201ENST00000378727 PLAC4Q8WY50 150 aa7.42□□□□□ -1.22
THUMPD2-201ENST00000378727 MT1BP07438 61 aa7.39□□□□□ -1.23
THUMPD2-201ENST00000378727 KRTAP25-1Q3LHN0 102 aa7.33□□□□□ -1.24
THUMPD2-201ENST00000378727 LCE2BO14633 110 aa7.32□□□□□ -1.24
THUMPD2-201ENST00000378727 MT1XP80297 61 aa7.18□□□□□ -1.26
THUMPD2-201ENST00000378727 KRTAP10-5P60370 271 aa7.17□□□□□ -1.26
THUMPD2-201ENST00000378727 TNP1P09430 55 aa7.13□□□□□ -1.27
THUMPD2-201ENST00000378727 USH2AO75445 5202 aa7.08□□□□□ -1.28
THUMPD2-201ENST00000378727 PRO2289Q9P1D8 64 aa6.99□□□□□ -1.29
THUMPD2-201ENST00000378727 PP632Q6XCG6 107 aa6.96□□□□□ -1.29
THUMPD2-201ENST00000378727 KRTAP23-1A1A580 65 aa6.92□□□□□ -1.3
THUMPD2-201ENST00000378727 KRTAP10-7P60409 375 aaPredicted RBP6.91□□□□□ -1.3
THUMPD2-201ENST00000378727 LCE3AQ5TA76 89 aa6.86□□□□□ -1.31
THUMPD2-201ENST00000378727 SSPOA2VEC9 5147 aa6.85□□□□□ -1.31
THUMPD2-201ENST00000378727 KRTAP10-12P60413 245 aa6.81□□□□□ -1.32
THUMPD2-201ENST00000378727 KRTAP19-6Q3LI70 58 aa6.8□□□□□ -1.32
THUMPD2-201ENST00000378727 FSIP2Q5CZC0 6907 aa6.77□□□□□ -1.33
THUMPD2-201ENST00000378727 KRTAP8-1Q8IUC2 63 aa6.7□□□□□ -1.34
THUMPD2-201ENST00000378727 KRTAP4-8A0A0G2JLE6 195 aa6.63□□□□□ -1.35
THUMPD2-201ENST00000378727 KRTAP4-8Q9BYQ9 185 aa6.63□□□□□ -1.35
THUMPD2-201ENST00000378727 KMT2DO14686 5537 aa6.6□□□□□ -1.35
THUMPD2-201ENST00000378727 KRTAP9-2Q9BYQ4 174 aa6.58□□□□□ -1.36
THUMPD2-201ENST00000378727 KRTAP12-3P60328 96 aa6.56□□□□□ -1.36
THUMPD2-201ENST00000378727 KRTAP15-1Q3LI76 137 aa6.54□□□□□ -1.36
THUMPD2-201ENST00000378727 FCGBPQ9Y6R7 5405 aaPredicted RBP6.52□□□□□ -1.37
THUMPD2-201ENST00000378727 KRTAP19-5Q3LI72 72 aa6.51□□□□□ -1.37
THUMPD2-201ENST00000378727 KRTAP19-7Q3SYF9 63 aa6.41□□□□□ -1.38
THUMPD2-201ENST00000378727 CRCT1Q9UGL9 99 aa6.36□□□□□ -1.39
THUMPD2-201ENST00000378727 SPRR5A0A1B0GTR4 108 aa6.28□□□□□ -1.4
THUMPD2-201ENST00000378727 MT1EP04732 61 aa6.27□□□□□ -1.41
THUMPD2-201ENST00000378727 LOC100996750A0A140TA64 210 aa6.2□□□□□ -1.42
THUMPD2-201ENST00000378727 KRTAP4-6Q9BYQ5 205 aa6.2□□□□□ -1.42
THUMPD2-201ENST00000378727 MACF1Q9UPN3 7388 aaKnown RBP6.19□□□□□ -1.42
THUMPD2-201ENST00000378727 MT1LQ93083 61 aa6.17□□□□□ -1.42
THUMPD2-201ENST00000378727 LCE3CQ5T5A8 94 aa6.14□□□□□ -1.43
THUMPD2-201ENST00000378727 NDUFAF8A1L188 74 aa6.07□□□□□ -1.44
THUMPD2-201ENST00000378727 SPRR2FQ96RM1 72 aa6.06□□□□□ -1.44
THUMPD2-201ENST00000378727 LUZP6Q538Z0 58 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms