RNA–Protein interactions for RNA: ENST00000377191.4

XRN2-201, Transcript of 5'-3' exoribonuclease 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRN2, Length 3,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2-201ENST00000377191 KRTAP3-3Q9BYR6 98 aa4.8□□□□□ -1.64
XRN2-201ENST00000377191 FAT3Q8TDW7 4589 aa4.79□□□□□ -1.64
XRN2-201ENST00000377191 RPL37P61927 97 aaKnown RBP4.79□□□□□ -1.64
XRN2-201ENST00000377191 KRTAP13-4Q3LI77 160 aa4.77□□□□□ -1.65
XRN2-201ENST00000377191 LRP1Q07954 4544 aaKnown RBP4.76□□□□□ -1.65
XRN2-201ENST00000377191 KRTAP3-2Q9BYR7 98 aa4.76□□□□□ -1.65
XRN2-201ENST00000377191 HSPG2P98160 4391 aa4.76□□□□□ -1.65
XRN2-201ENST00000377191 TNXBP22105 4242 aa4.76□□□□□ -1.65
XRN2-201ENST00000377191 S4R3F8 94 aa4.74□□□□□ -1.65
XRN2-201ENST00000377191 A0A0D9SG42 100 aa4.74□□□□□ -1.65
XRN2-201ENST00000377191 KRTAP10-8P60410 259 aa4.72□□□□□ -1.65
XRN2-201ENST00000377191 XP32Q5T750 250 aa4.71□□□□□ -1.66
XRN2-201ENST00000377191 P0C880 135 aa4.69□□□□□ -1.66
XRN2-201ENST00000377191 RYR2Q92736 4967 aa4.68□□□□□ -1.66
XRN2-201ENST00000377191 TPRXLQ17RH7 258 aa4.68□□□□□ -1.66
XRN2-201ENST00000377191 KMT2CQ8NEZ4 4911 aaKnown RBP4.67□□□□□ -1.66
XRN2-201ENST00000377191 KRTAP12-2P59991 146 aa4.63□□□□□ -1.67
XRN2-201ENST00000377191 Q5VSD8 79 aa4.63□□□□□ -1.67
XRN2-201ENST00000377191 C10orf95Q9H7T3 257 aa4.62□□□□□ -1.67
XRN2-201ENST00000377191 LPAP08519 4548 aa4.61□□□□□ -1.67
XRN2-201ENST00000377191 SPINT4Q6UDR6 99 aa4.61□□□□□ -1.67
XRN2-201ENST00000377191 KRTAP12-1P59990 96 aa4.59□□□□□ -1.67
XRN2-201ENST00000377191 M0QZ58 72 aa4.55□□□□□ -1.68
XRN2-201ENST00000377191 MT1HL1P0DM35 61 aa4.53□□□□□ -1.68
XRN2-201ENST00000377191 RYR1P21817 5038 aa4.53□□□□□ -1.68
XRN2-201ENST00000377191 LRP2P98164 4655 aa4.53□□□□□ -1.69
XRN2-201ENST00000377191 KRTAP15-1Q3LI76 137 aa4.52□□□□□ -1.69
XRN2-201ENST00000377191 KIAA1109Q2LD37 5005 aa4.52□□□□□ -1.69
XRN2-201ENST00000377191 KRTAP17-1Q9BYP8 105 aa4.51□□□□□ -1.69
XRN2-201ENST00000377191 RYR3Q15413 4870 aa4.45□□□□□ -1.7
XRN2-201ENST00000377191 A0A0A0MQY5 61 aa4.44□□□□□ -1.7
XRN2-201ENST00000377191 NDUFAF8A1L188 74 aa4.44□□□□□ -1.7
XRN2-201ENST00000377191 ABCA13Q86UQ4 5058 aa4.42□□□□□ -1.7
XRN2-201ENST00000377191 R4GN34 69 aa4.4□□□□□ -1.71
XRN2-201ENST00000377191 MUC2Q02817 5179 aa4.38□□□□□ -1.71
XRN2-201ENST00000377191 EPPK1P58107 5090 aaKnown RBP4.36□□□□□ -1.71
XRN2-201ENST00000377191 LORP23490 312 aaPredicted RBP4.33□□□□□ -1.72
XRN2-201ENST00000377191 MUC17Q685J3 4493 aa4.33□□□□□ -1.72
XRN2-201ENST00000377191 SEC61BP60468 96 aaKnown RBP4.3□□□□□ -1.72
XRN2-201ENST00000377191 PLAC4Q8WY50 150 aa4.27□□□□□ -1.73
XRN2-201ENST00000377191 KRTAP4-1Q9BYQ7 146 aa4.25□□□□□ -1.73
XRN2-201ENST00000377191 KRTAP4-5Q9BYR2 181 aa4.23□□□□□ -1.73
XRN2-201ENST00000377191 KRTAP19-2Q3LHN2 52 aa4.21□□□□□ -1.74
XRN2-201ENST00000377191 PP632Q6XCG6 107 aa4.21□□□□□ -1.74
XRN2-201ENST00000377191 J3QL48 77 aa4.19□□□□□ -1.74
XRN2-201ENST00000377191 CAMK2N1Q7Z7J9 78 aa4.19□□□□□ -1.74
XRN2-201ENST00000377191 FAT4Q6V0I7 4981 aa4.13□□□□□ -1.75
XRN2-201ENST00000377191 FLGP20930 4061 aaPredicted RBP4.12□□□□□ -1.75
XRN2-201ENST00000377191 LUZP6Q538Z0 58 aa4.1□□□□□ -1.75
XRN2-201ENST00000377191 HERC2O95714 4834 aa4.08□□□□□ -1.76
XRN2-201ENST00000377191 HERC1Q15751 4861 aa4.06□□□□□ -1.76
XRN2-201ENST00000377191 RNF213Q63HN8 5207 aa4.06□□□□□ -1.76
XRN2-201ENST00000377191 TNP1P09430 55 aa4.05□□□□□ -1.76
XRN2-201ENST00000377191 KRTAP23-1A1A580 65 aa4.04□□□□□ -1.76
XRN2-201ENST00000377191 PCLOQ9Y6V0 5065 aa4.03□□□□□ -1.76
XRN2-201ENST00000377191 BIRC6Q9NR09 4857 aa4.01□□□□□ -1.77
XRN2-201ENST00000377191 SPRR5A0A1B0GTR4 108 aa3.97□□□□□ -1.77
XRN2-201ENST00000377191 LCE2DQ5TA82 110 aaPredicted RBP3.93□□□□□ -1.78
XRN2-201ENST00000377191 SPRR2GQ9BYE4 73 aa3.92□□□□□ -1.78
XRN2-201ENST00000377191 HMCN2Q8NDA2 5059 aa3.9□□□□□ -1.78
XRN2-201ENST00000377191 LCE2CQ5TA81 110 aa3.89□□□□□ -1.79
XRN2-201ENST00000377191 KRTAP19-1Q8IUB9 90 aa3.88□□□□□ -1.79
XRN2-201ENST00000377191 UBR4Q5T4S7 5183 aa3.88□□□□□ -1.79
XRN2-201ENST00000377191 LCE3AQ5TA76 89 aa3.83□□□□□ -1.8
XRN2-201ENST00000377191 M0R2T5 61 aa3.8□□□□□ -1.8
XRN2-201ENST00000377191 MT1HP80294 61 aa3.77□□□□□ -1.81
XRN2-201ENST00000377191 MT1FP04733 61 aa3.76□□□□□ -1.81
XRN2-201ENST00000377191 MT2AP02795 61 aa3.75□□□□□ -1.81
XRN2-201ENST00000377191 KRTAP10-10P60014 251 aa3.75□□□□□ -1.81
XRN2-201ENST00000377191 KRTAP8-1Q8IUC2 63 aa3.74□□□□□ -1.81
XRN2-201ENST00000377191 KRTAP19-8Q3LI54 63 aa3.72□□□□□ -1.81
XRN2-201ENST00000377191 KRTAP9-8Q9BYQ0 159 aa3.71□□□□□ -1.82
XRN2-201ENST00000377191 USH2AO75445 5202 aa3.7□□□□□ -1.82
XRN2-201ENST00000377191 KRTAP10-5P60370 271 aa3.68□□□□□ -1.82
XRN2-201ENST00000377191 KMT2DO14686 5537 aa3.67□□□□□ -1.82
XRN2-201ENST00000377191 MT1XP80297 61 aa3.67□□□□□ -1.82
XRN2-201ENST00000377191 MT1BP07438 61 aa3.67□□□□□ -1.82
XRN2-201ENST00000377191 KRTAP12-3P60328 96 aa3.64□□□□□ -1.83
XRN2-201ENST00000377191 KRTAP10-12P60413 245 aa3.64□□□□□ -1.83
XRN2-201ENST00000377191 PRO2289Q9P1D8 64 aa3.6□□□□□ -1.83
XRN2-201ENST00000377191 INE1O15225 51 aa3.58□□□□□ -1.84
XRN2-201ENST00000377191 KRTAP10-7P60409 375 aaPredicted RBP3.57□□□□□ -1.84
XRN2-201ENST00000377191 KRTAP9-3Q9BYQ3 159 aa3.55□□□□□ -1.84
XRN2-201ENST00000377191 FSIP2Q5CZC0 6907 aa3.52□□□□□ -1.85
XRN2-201ENST00000377191 KRTAP19-5Q3LI72 72 aa3.44□□□□□ -1.86
XRN2-201ENST00000377191 LCE3CQ5T5A8 94 aa3.44□□□□□ -1.86
XRN2-201ENST00000377191 LCE2BO14633 110 aa3.39□□□□□ -1.87
XRN2-201ENST00000377191 KRTAP9-6A8MVA2 160 aa3.32□□□□□ -1.88
XRN2-201ENST00000377191 KRTAP4-8A0A0G2JLE6 195 aa3.32□□□□□ -1.88
XRN2-201ENST00000377191 KRTAP4-8Q9BYQ9 185 aa3.32□□□□□ -1.88
XRN2-201ENST00000377191 DSTQ03001 7570 aaKnown RBP3.29□□□□□ -1.88
XRN2-201ENST00000377191 KRTAP4-7Q9BYR0 210 aa3.28□□□□□ -1.89
XRN2-201ENST00000377191 KRTAP19-7Q3SYF9 63 aa3.27□□□□□ -1.89
XRN2-201ENST00000377191 KRTAP2-3P0C7H8 128 aa3.26□□□□□ -1.89
XRN2-201ENST00000377191 KRTAP2-4Q9BYR9 128 aa3.26□□□□□ -1.89
XRN2-201ENST00000377191 KRTAP2-1Q9BYU5 128 aa3.26□□□□□ -1.89
XRN2-201ENST00000377191 LCE2AQ5TA79 106 aaPredicted RBP3.23□□□□□ -1.89
XRN2-201ENST00000377191 KRTAP19-4Q3LI73 84 aa3.22□□□□□ -1.89
XRN2-201ENST00000377191 FCGBPQ9Y6R7 5405 aaPredicted RBP3.21□□□□□ -1.9
XRN2-201ENST00000377191 MUC12Q9UKN1 5478 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms