RNA–Protein interactions for RNA: ENST00000377135.8

IRF3-202, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,442 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-202ENST00000377135 Q5VV11 94 aa8.01□□□□□ -1.13
IRF3-202ENST00000377135 KLKP1Q107X0 134 aa8□□□□□ -1.13
IRF3-202ENST00000377135 MT1BP07438 61 aa7.99□□□□□ -1.13
IRF3-202ENST00000377135 H0Y9P7 68 aa7.97□□□□□ -1.13
IRF3-202ENST00000377135 ATOX1O00244 68 aa7.97□□□□□ -1.13
IRF3-202ENST00000377135 KRTAP19-8Q3LI54 63 aa7.97□□□□□ -1.13
IRF3-202ENST00000377135 A6NN06 94 aa7.95□□□□□ -1.14
IRF3-202ENST00000377135 KRTAP6-3Q3LI67 103 aa7.95□□□□□ -1.14
IRF3-202ENST00000377135 LINC00643Q86TS7 51 aa7.95□□□□□ -1.14
IRF3-202ENST00000377135 NDUFC1O43677 76 aa7.91□□□□□ -1.14
IRF3-202ENST00000377135 IMUPQ9GZP8 106 aa7.91□□□□□ -1.14
IRF3-202ENST00000377135 CRIPTQ9P021 101 aa7.9□□□□□ -1.14
IRF3-202ENST00000377135 LINC00208Q96KT6 92 aa7.86□□□□□ -1.15
IRF3-202ENST00000377135 A8MUN3 132 aa7.83□□□□□ -1.16
IRF3-202ENST00000377135 KRTAP10-5P60370 271 aa7.82□□□□□ -1.16
IRF3-202ENST00000377135 MP68P56378 58 aa7.81□□□□□ -1.16
IRF3-202ENST00000377135 H0YAA0 97 aa7.8□□□□□ -1.16
IRF3-202ENST00000377135 OCR1Q9BZK8 76 aa7.8□□□□□ -1.16
IRF3-202ENST00000377135 ADM2Q7Z4H4 148 aa7.76□□□□□ -1.17
IRF3-202ENST00000377135 NEBP20929 6669 aa7.74□□□□□ -1.17
IRF3-202ENST00000377135 MT-ATP8P03928 68 aa7.7□□□□□ -1.18
IRF3-202ENST00000377135 SCGB1A1P11684 91 aa7.68□□□□□ -1.18
IRF3-202ENST00000377135 H3BPC8 53 aa7.67□□□□□ -1.18
IRF3-202ENST00000377135 MUC12Q9UKN1 5478 aa7.64□□□□□ -1.19
IRF3-202ENST00000377135 DMAC1Q96GE9 116 aa7.58□□□□□ -1.2
IRF3-202ENST00000377135 PLAC4Q8WY50 150 aa7.57□□□□□ -1.2
IRF3-202ENST00000377135 R4GN34 69 aa7.56□□□□□ -1.2
IRF3-202ENST00000377135 P0C880 135 aa7.55□□□□□ -1.2
IRF3-202ENST00000377135 C20orf197Q8N268 126 aa7.55□□□□□ -1.2
IRF3-202ENST00000377135 PRO2289Q9P1D8 64 aa7.54□□□□□ -1.2
IRF3-202ENST00000377135 KRTAP5-9P26371 169 aa7.53□□□□□ -1.2
IRF3-202ENST00000377135 M0QZ58 72 aa7.49□□□□□ -1.21
IRF3-202ENST00000377135 KMT2DO14686 5537 aa7.49□□□□□ -1.21
IRF3-202ENST00000377135 MT1XP80297 61 aa7.48□□□□□ -1.21
IRF3-202ENST00000377135 TRAV7A0A075B6U4 112 aa7.44□□□□□ -1.22
IRF3-202ENST00000377135 ACYP2P14621 99 aa7.44□□□□□ -1.22
IRF3-202ENST00000377135 MDN1Q9NU22 5596 aa7.42□□□□□ -1.22
IRF3-202ENST00000377135 LINC01554Q52M75 96 aa7.42□□□□□ -1.22
IRF3-202ENST00000377135 SMIM20Q8N5G0 67 aa7.41□□□□□ -1.22
IRF3-202ENST00000377135 KRTAP20-1Q3LI63 56 aa7.38□□□□□ -1.23
IRF3-202ENST00000377135 SPTSSBQ8NFR3 76 aa7.35□□□□□ -1.23
IRF3-202ENST00000377135 ANAPC13Q9BS18 74 aa7.35□□□□□ -1.23
IRF3-202ENST00000377135 SPRR2FQ96RM1 72 aa7.34□□□□□ -1.23
IRF3-202ENST00000377135 SERP2Q8N6R1 65 aa7.32□□□□□ -1.24
IRF3-202ENST00000377135 KRTAP12-2P59991 146 aa7.31□□□□□ -1.24
IRF3-202ENST00000377135 CHKB-CPT1BH3BT56 60 aa7.3□□□□□ -1.24
IRF3-202ENST00000377135 KRTAP8-1Q8IUC2 63 aa7.3□□□□□ -1.24
IRF3-202ENST00000377135 COX7CP15954 63 aa7.27□□□□□ -1.25
IRF3-202ENST00000377135 SNURFQ9Y675 71 aa7.27□□□□□ -1.25
IRF3-202ENST00000377135 PCP4P48539 62 aa7.25□□□□□ -1.25
IRF3-202ENST00000377135 SPRR2EP22531 72 aa7.24□□□□□ -1.25
IRF3-202ENST00000377135 SPRR2BP35325 72 aa7.24□□□□□ -1.25
IRF3-202ENST00000377135 SPRR2AP35326 72 aa7.24□□□□□ -1.25
IRF3-202ENST00000377135 KRTAP4-8A0A0G2JLE6 195 aa7.21□□□□□ -1.25
IRF3-202ENST00000377135 KRTAP2-3P0C7H8 128 aa7.21□□□□□ -1.25
IRF3-202ENST00000377135 KRTAP4-8Q9BYQ9 185 aa7.21□□□□□ -1.25
IRF3-202ENST00000377135 KRTAP2-4Q9BYR9 128 aa7.21□□□□□ -1.25
IRF3-202ENST00000377135 CCDC179H3BU77 68 aa7.17□□□□□ -1.26
IRF3-202ENST00000377135 SPANXA2-OT1Q8N9U9 137 aa7.17□□□□□ -1.26
IRF3-202ENST00000377135 KRTAP10-7P60409 375 aaPredicted RBP7.15□□□□□ -1.27
IRF3-202ENST00000377135 LCE1AQ5T7P2 110 aa7.13□□□□□ -1.27
IRF3-202ENST00000377135 KRTAP10-12P60413 245 aa7.11□□□□□ -1.27
IRF3-202ENST00000377135 CYSTM1Q9H1C7 97 aa7.1□□□□□ -1.27
IRF3-202ENST00000377135 KRTAP13-4Q3LI77 160 aa7.02□□□□□ -1.29
IRF3-202ENST00000377135 H7BZZ5 65 aa7.01□□□□□ -1.29
IRF3-202ENST00000377135 SPRR2DP22532 72 aa7□□□□□ -1.29
IRF3-202ENST00000377135 COA5Q86WW8 74 aa6.97□□□□□ -1.29
IRF3-202ENST00000377135 KRTAP2-2Q9BYT5 123 aa6.97□□□□□ -1.29
IRF3-202ENST00000377135 KRTAP2-1Q9BYU5 128 aa6.97□□□□□ -1.29
IRF3-202ENST00000377135 TMEM258P61165 79 aa6.96□□□□□ -1.3
IRF3-202ENST00000377135 CAMK2N1Q7Z7J9 78 aa6.96□□□□□ -1.3
IRF3-202ENST00000377135 SEC61GP60059 68 aa6.93□□□□□ -1.3
IRF3-202ENST00000377135 ATP5EP56381 51 aaPredicted RBP6.92□□□□□ -1.3
IRF3-202ENST00000377135 SERP1Q9Y6X1 66 aa6.91□□□□□ -1.3
IRF3-202ENST00000377135 A0A0D9SG42 100 aa6.84□□□□□ -1.31
IRF3-202ENST00000377135 LCE3BQ5TA77 95 aa6.82□□□□□ -1.32
IRF3-202ENST00000377135 SPATA8Q6RVD6 105 aa6.81□□□□□ -1.32
IRF3-202ENST00000377135 A0A1B0GU33 70 aa6.8□□□□□ -1.32
IRF3-202ENST00000377135 SPINT4Q6UDR6 99 aa6.76□□□□□ -1.33
IRF3-202ENST00000377135 RPS28P62857 69 aaKnown RBP6.68□□□□□ -1.34
IRF3-202ENST00000377135 KRTAP19-7Q3SYF9 63 aa6.68□□□□□ -1.34
IRF3-202ENST00000377135 KRTAP12-1P59990 96 aa6.67□□□□□ -1.34
IRF3-202ENST00000377135 A0A1B0GU69 56 aa6.64□□□□□ -1.35
IRF3-202ENST00000377135 MT1EP04732 61 aa6.63□□□□□ -1.35
IRF3-202ENST00000377135 LCE5AQ5TCM9 118 aa6.61□□□□□ -1.35
IRF3-202ENST00000377135 SMIM26A0A096LP01 95 aa6.6□□□□□ -1.35
IRF3-202ENST00000377135 DSTQ03001 7570 aaKnown RBP6.59□□□□□ -1.35
IRF3-202ENST00000377135 KRTAP19-3Q7Z4W3 81 aa6.59□□□□□ -1.35
IRF3-202ENST00000377135 A8MU10 97 aa6.54□□□□□ -1.36
IRF3-202ENST00000377135 KRTAP19-5Q3LI72 72 aa6.53□□□□□ -1.36
IRF3-202ENST00000377135 V9GYY9 64 aa6.47□□□□□ -1.37
IRF3-202ENST00000377135 MT1GP13640 62 aa6.46□□□□□ -1.38
IRF3-202ENST00000377135 Q1T7F1 81 aa6.43□□□□□ -1.38
IRF3-202ENST00000377135 PRR15LQ9BU68 103 aa6.42□□□□□ -1.38
IRF3-202ENST00000377135 LINC01558Q9Y6Z2 57 aa6.42□□□□□ -1.38
IRF3-202ENST00000377135 C10orf95Q9H7T3 257 aa6.41□□□□□ -1.38
IRF3-202ENST00000377135 TNP1P09430 55 aa6.4□□□□□ -1.39
IRF3-202ENST00000377135 PP632Q6XCG6 107 aa6.4□□□□□ -1.39
IRF3-202ENST00000377135 KRTAP4-9Q9BYQ8 210 aa6.37□□□□□ -1.39
IRF3-202ENST00000377135 LCE3AQ5TA76 89 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms