RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 CYP4F30PQ9H0H9 118 aa6.53□□□□□ -1.36
HDAC6-204ENST00000376643 TRAV22A0A0B4J277 110 aa6.52□□□□□ -1.37
HDAC6-204ENST00000376643 LOC101927531A0A1B0GV80 90 aa6.52□□□□□ -1.37
HDAC6-204ENST00000376643 KRTAP3-3Q9BYR6 98 aa6.48□□□□□ -1.37
HDAC6-204ENST00000376643 A0A087WVE0 104 aa6.46□□□□□ -1.38
HDAC6-204ENST00000376643 NDUFC1O43677 76 aa6.46□□□□□ -1.38
HDAC6-204ENST00000376643 ATOX1O00244 68 aa6.45□□□□□ -1.38
HDAC6-204ENST00000376643 KRTAP5-9P26371 169 aa6.45□□□□□ -1.38
HDAC6-204ENST00000376643 LINC00643Q86TS7 51 aa6.45□□□□□ -1.38
HDAC6-204ENST00000376643 H0YAA0 97 aa6.44□□□□□ -1.38
HDAC6-204ENST00000376643 KRTAP20-1Q3LI63 56 aa6.44□□□□□ -1.38
HDAC6-204ENST00000376643 MUC12Q9UKN1 5478 aa6.43□□□□□ -1.38
HDAC6-204ENST00000376643 HIST1H4AP62805 103 aaKnown RBP6.42□□□□□ -1.38
HDAC6-204ENST00000376643 ATP5EP2Q5VTU8 51 aa6.42□□□□□ -1.38
HDAC6-204ENST00000376643 UQCRQO14949 82 aa6.41□□□□□ -1.38
HDAC6-204ENST00000376643 A8MUN3 132 aa6.4□□□□□ -1.38
HDAC6-204ENST00000376643 PRO2289Q9P1D8 64 aa6.39□□□□□ -1.39
HDAC6-204ENST00000376643 J3QR89 54 aa6.37□□□□□ -1.39
HDAC6-204ENST00000376643 MT-ATP8P03928 68 aa6.36□□□□□ -1.39
HDAC6-204ENST00000376643 H0Y9P7 68 aa6.35□□□□□ -1.39
HDAC6-204ENST00000376643 K7ERU9 68 aa6.31□□□□□ -1.4
HDAC6-204ENST00000376643 ADM2Q7Z4H4 148 aa6.3□□□□□ -1.4
HDAC6-204ENST00000376643 KMT2DO14686 5537 aa6.29□□□□□ -1.4
HDAC6-204ENST00000376643 PLAC4Q8WY50 150 aa6.29□□□□□ -1.4
HDAC6-204ENST00000376643 C20orf197Q8N268 126 aa6.28□□□□□ -1.4
HDAC6-204ENST00000376643 OCR1Q9BZK8 76 aa6.27□□□□□ -1.41
HDAC6-204ENST00000376643 MP68P56378 58 aa6.25□□□□□ -1.41
HDAC6-204ENST00000376643 MDN1Q9NU22 5596 aa6.24□□□□□ -1.41
HDAC6-204ENST00000376643 KRTAP2-3P0C7H8 128 aa6.23□□□□□ -1.41
HDAC6-204ENST00000376643 LINC00208Q96KT6 92 aa6.23□□□□□ -1.41
HDAC6-204ENST00000376643 KRTAP2-4Q9BYR9 128 aa6.23□□□□□ -1.41
HDAC6-204ENST00000376643 R4GN34 69 aa6.23□□□□□ -1.41
HDAC6-204ENST00000376643 SPRR2FQ96RM1 72 aa6.22□□□□□ -1.41
HDAC6-204ENST00000376643 SPRR2EP22531 72 aa6.18□□□□□ -1.42
HDAC6-204ENST00000376643 SPRR2BP35325 72 aa6.18□□□□□ -1.42
HDAC6-204ENST00000376643 SPRR2AP35326 72 aa6.18□□□□□ -1.42
HDAC6-204ENST00000376643 MT1XP80297 61 aa6.17□□□□□ -1.42
HDAC6-204ENST00000376643 KRTAP8-1Q8IUC2 63 aa6.17□□□□□ -1.42
HDAC6-204ENST00000376643 KRTAP12-2P59991 146 aa6.15□□□□□ -1.42
HDAC6-204ENST00000376643 H3BPC8 53 aa6.14□□□□□ -1.43
HDAC6-204ENST00000376643 M0QZ58 72 aa6.13□□□□□ -1.43
HDAC6-204ENST00000376643 SCGB1A1P11684 91 aa6.12□□□□□ -1.43
HDAC6-204ENST00000376643 DMAC1Q96GE9 116 aa6.08□□□□□ -1.44
HDAC6-204ENST00000376643 P0C880 135 aa6.07□□□□□ -1.44
HDAC6-204ENST00000376643 TRAV7A0A075B6U4 112 aa6.05□□□□□ -1.44
HDAC6-204ENST00000376643 SVIPQ8NHG7 77 aa6.04□□□□□ -1.44
HDAC6-204ENST00000376643 LINC01554Q52M75 96 aa6.03□□□□□ -1.44
HDAC6-204ENST00000376643 LCE1AQ5T7P2 110 aa6.03□□□□□ -1.44
HDAC6-204ENST00000376643 KRTAP2-2Q9BYT5 123 aa6.03□□□□□ -1.44
HDAC6-204ENST00000376643 KRTAP2-1Q9BYU5 128 aa6.03□□□□□ -1.44
HDAC6-204ENST00000376643 SPRR2DP22532 72 aa5.99□□□□□ -1.45
HDAC6-204ENST00000376643 SPTSSBQ8NFR3 76 aa5.99□□□□□ -1.45
HDAC6-204ENST00000376643 SNURFQ9Y675 71 aa5.99□□□□□ -1.45
HDAC6-204ENST00000376643 SMIM20Q8N5G0 67 aa5.96□□□□□ -1.46
HDAC6-204ENST00000376643 KRTAP3-2Q9BYR7 98 aa5.96□□□□□ -1.46
HDAC6-204ENST00000376643 ACYP2P14621 99 aa5.95□□□□□ -1.46
HDAC6-204ENST00000376643 SERP2Q8N6R1 65 aa5.95□□□□□ -1.46
HDAC6-204ENST00000376643 CYSTM1Q9H1C7 97 aa5.92□□□□□ -1.46
HDAC6-204ENST00000376643 KRTAP4-8A0A0G2JLE6 195 aa5.91□□□□□ -1.46
HDAC6-204ENST00000376643 KRTAP4-8Q9BYQ9 185 aa5.91□□□□□ -1.46
HDAC6-204ENST00000376643 KRTAP10-12P60413 245 aa5.89□□□□□ -1.47
HDAC6-204ENST00000376643 PCP4P48539 62 aa5.87□□□□□ -1.47
HDAC6-204ENST00000376643 KRTAP10-7P60409 375 aaPredicted RBP5.86□□□□□ -1.47
HDAC6-204ENST00000376643 CHKB-CPT1BH3BT56 60 aa5.85□□□□□ -1.47
HDAC6-204ENST00000376643 COX7CP15954 63 aa5.85□□□□□ -1.47
HDAC6-204ENST00000376643 LCE3BQ5TA77 95 aa5.82□□□□□ -1.48
HDAC6-204ENST00000376643 ANAPC13Q9BS18 74 aa5.78□□□□□ -1.48
HDAC6-204ENST00000376643 CCDC179H3BU77 68 aa5.77□□□□□ -1.49
HDAC6-204ENST00000376643 H7BZZ5 65 aa5.75□□□□□ -1.49
HDAC6-204ENST00000376643 SPANXA2-OT1Q8N9U9 137 aa5.74□□□□□ -1.49
HDAC6-204ENST00000376643 CAMK2N1Q7Z7J9 78 aa5.71□□□□□ -1.5
HDAC6-204ENST00000376643 COA5Q86WW8 74 aa5.64□□□□□ -1.51
HDAC6-204ENST00000376643 SEC61GP60059 68 aa5.57□□□□□ -1.52
HDAC6-204ENST00000376643 KRTAP13-4Q3LI77 160 aa5.56□□□□□ -1.52
HDAC6-204ENST00000376643 LCE5AQ5TCM9 118 aa5.55□□□□□ -1.52
HDAC6-204ENST00000376643 DSTQ03001 7570 aaKnown RBP5.54□□□□□ -1.52
HDAC6-204ENST00000376643 SERP1Q9Y6X1 66 aa5.54□□□□□ -1.52
HDAC6-204ENST00000376643 KRTAP19-3Q7Z4W3 81 aa5.53□□□□□ -1.52
HDAC6-204ENST00000376643 KRTAP19-7Q3SYF9 63 aa5.51□□□□□ -1.53
HDAC6-204ENST00000376643 GPR98Q8WXG9 6306 aa5.5□□□□□ -1.53
HDAC6-204ENST00000376643 MT1EP04732 61 aa5.5□□□□□ -1.53
HDAC6-204ENST00000376643 A0A0D9SG42 100 aa5.45□□□□□ -1.54
HDAC6-204ENST00000376643 PP632Q6XCG6 107 aa5.44□□□□□ -1.54
HDAC6-204ENST00000376643 SPINT4Q6UDR6 99 aa5.42□□□□□ -1.54
HDAC6-204ENST00000376643 A0A1B0GU33 70 aa5.4□□□□□ -1.54
HDAC6-204ENST00000376643 MT1GP13640 62 aa5.4□□□□□ -1.54
HDAC6-204ENST00000376643 TMEM258P61165 79 aa5.4□□□□□ -1.54
HDAC6-204ENST00000376643 ATP5EP56381 51 aaPredicted RBP5.38□□□□□ -1.55
HDAC6-204ENST00000376643 KRTAP4-9Q9BYQ8 210 aa5.38□□□□□ -1.55
HDAC6-204ENST00000376643 SPATA8Q6RVD6 105 aa5.36□□□□□ -1.55
HDAC6-204ENST00000376643 KRTAP19-5Q3LI72 72 aa5.34□□□□□ -1.55
HDAC6-204ENST00000376643 LCE4AQ5TA78 99 aa5.32□□□□□ -1.56
HDAC6-204ENST00000376643 SMIM26A0A096LP01 95 aa5.31□□□□□ -1.56
HDAC6-204ENST00000376643 KRTAP12-1P59990 96 aa5.31□□□□□ -1.56
HDAC6-204ENST00000376643 LCE1DQ5T752 114 aa5.28□□□□□ -1.56
HDAC6-204ENST00000376643 A0A1B0GU69 56 aa5.27□□□□□ -1.57
HDAC6-204ENST00000376643 LINC01558Q9Y6Z2 57 aa5.26□□□□□ -1.57
HDAC6-204ENST00000376643 MT1MQ8N339 61 aa5.25□□□□□ -1.57
HDAC6-204ENST00000376643 MT1LQ93083 61 aa5.23□□□□□ -1.57
HDAC6-204ENST00000376643 A8MU10 97 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 175.9 ms