RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 KRTAP10-8P60410 259 aa5.6□□□□□ -1.51
ABCF1-202ENST00000376545 KMT2CQ8NEZ4 4911 aaKnown RBP5.59□□□□□ -1.51
ABCF1-202ENST00000376545 A0A1B0GU33 70 aa5.58□□□□□ -1.52
ABCF1-202ENST00000376545 H1FX-AS1Q4G0G2 97 aa5.58□□□□□ -1.52
ABCF1-202ENST00000376545 LRP1Q07954 4544 aaKnown RBP5.58□□□□□ -1.52
ABCF1-202ENST00000376545 DMBT1Q9UGM3 2413 aaPredicted RBP5.58□□□□□ -1.52
ABCF1-202ENST00000376545 RPL37P61927 97 aaKnown RBP5.52□□□□□ -1.53
ABCF1-202ENST00000376545 KRTAP3-3Q9BYR6 98 aa5.52□□□□□ -1.53
ABCF1-202ENST00000376545 NDUFAF8A1L188 74 aa5.51□□□□□ -1.53
ABCF1-202ENST00000376545 SPINT4Q6UDR6 99 aa5.5□□□□□ -1.53
ABCF1-202ENST00000376545 XP32Q5T750 250 aa5.48□□□□□ -1.53
ABCF1-202ENST00000376545 Q5VSD8 79 aa5.47□□□□□ -1.53
ABCF1-202ENST00000376545 KRTAP10-6P60371 365 aaPredicted RBP5.47□□□□□ -1.53
ABCF1-202ENST00000376545 RYR1P21817 5038 aa5.47□□□□□ -1.53
ABCF1-202ENST00000376545 KRTAP3-2Q9BYR7 98 aa5.44□□□□□ -1.54
ABCF1-202ENST00000376545 KRTAP17-1Q9BYP8 105 aa5.43□□□□□ -1.54
ABCF1-202ENST00000376545 RYR3Q15413 4870 aa5.42□□□□□ -1.54
ABCF1-202ENST00000376545 MYCBP2O75592 4640 aa5.41□□□□□ -1.54
ABCF1-202ENST00000376545 MT1HL1P0DM35 61 aa5.4□□□□□ -1.55
ABCF1-202ENST00000376545 S4R3F8 94 aa5.39□□□□□ -1.55
ABCF1-202ENST00000376545 KRTAP13-4Q3LI77 160 aa5.38□□□□□ -1.55
ABCF1-202ENST00000376545 K7ERS5 55 aa5.37□□□□□ -1.55
ABCF1-202ENST00000376545 LPAP08519 4548 aa5.34□□□□□ -1.55
ABCF1-202ENST00000376545 TPRXLQ17RH7 258 aa5.29□□□□□ -1.56
ABCF1-202ENST00000376545 C10orf95Q9H7T3 257 aa5.29□□□□□ -1.56
ABCF1-202ENST00000376545 KIAA1109Q2LD37 5005 aa5.29□□□□□ -1.56
ABCF1-202ENST00000376545 LRP2P98164 4655 aa5.28□□□□□ -1.56
ABCF1-202ENST00000376545 A0A0D9SG42 100 aa5.23□□□□□ -1.57
ABCF1-202ENST00000376545 LUZP6Q538Z0 58 aa5.22□□□□□ -1.57
ABCF1-202ENST00000376545 KRTAP15-1Q3LI76 137 aa5.21□□□□□ -1.58
ABCF1-202ENST00000376545 BIRC6Q9NR09 4857 aa5.21□□□□□ -1.58
ABCF1-202ENST00000376545 KRTAP12-2P59991 146 aa5.2□□□□□ -1.58
ABCF1-202ENST00000376545 EPPK1P58107 5090 aaKnown RBP5.19□□□□□ -1.58
ABCF1-202ENST00000376545 KRTAP12-1P59990 96 aa5.18□□□□□ -1.58
ABCF1-202ENST00000376545 MUC17Q685J3 4493 aa5.17□□□□□ -1.58
ABCF1-202ENST00000376545 M0QZ58 72 aa5.17□□□□□ -1.58
ABCF1-202ENST00000376545 HERC2O95714 4834 aa5.17□□□□□ -1.58
ABCF1-202ENST00000376545 ABCA13Q86UQ4 5058 aa5.16□□□□□ -1.58
ABCF1-202ENST00000376545 KRTAP4-5Q9BYR2 181 aa5.09□□□□□ -1.59
ABCF1-202ENST00000376545 SEC61BP60468 96 aaKnown RBP5.04□□□□□ -1.6
ABCF1-202ENST00000376545 KRTAP19-2Q3LHN2 52 aa5.01□□□□□ -1.61
ABCF1-202ENST00000376545 KRTAP4-1Q9BYQ7 146 aa5.01□□□□□ -1.61
ABCF1-202ENST00000376545 R4GN34 69 aa4.97□□□□□ -1.61
ABCF1-202ENST00000376545 LORP23490 312 aaPredicted RBP4.96□□□□□ -1.62
ABCF1-202ENST00000376545 J3QL48 77 aa4.86□□□□□ -1.63
ABCF1-202ENST00000376545 FLGP20930 4061 aaPredicted RBP4.85□□□□□ -1.63
ABCF1-202ENST00000376545 HERC1Q15751 4861 aa4.8□□□□□ -1.64
ABCF1-202ENST00000376545 PLAC4Q8WY50 150 aa4.8□□□□□ -1.64
ABCF1-202ENST00000376545 MUC2Q02817 5179 aa4.75□□□□□ -1.65
ABCF1-202ENST00000376545 PCLOQ9Y6V0 5065 aa4.74□□□□□ -1.65
ABCF1-202ENST00000376545 PP632Q6XCG6 107 aa4.72□□□□□ -1.65
ABCF1-202ENST00000376545 HMCN2Q8NDA2 5059 aa4.69□□□□□ -1.66
ABCF1-202ENST00000376545 CAMK2N1Q7Z7J9 78 aa4.68□□□□□ -1.66
ABCF1-202ENST00000376545 LCE2CQ5TA81 110 aa4.67□□□□□ -1.66
ABCF1-202ENST00000376545 KRTAP23-1A1A580 65 aa4.64□□□□□ -1.67
ABCF1-202ENST00000376545 SPRR2GQ9BYE4 73 aa4.6□□□□□ -1.67
ABCF1-202ENST00000376545 TNP1P09430 55 aa4.57□□□□□ -1.68
ABCF1-202ENST00000376545 KRTAP19-1Q8IUB9 90 aa4.55□□□□□ -1.68
ABCF1-202ENST00000376545 FAT4Q6V0I7 4981 aa4.54□□□□□ -1.68
ABCF1-202ENST00000376545 MT1HP80294 61 aa4.5□□□□□ -1.69
ABCF1-202ENST00000376545 RNF213Q63HN8 5207 aa4.49□□□□□ -1.69
ABCF1-202ENST00000376545 SPRR5A0A1B0GTR4 108 aa4.47□□□□□ -1.69
ABCF1-202ENST00000376545 MT2AP02795 61 aa4.43□□□□□ -1.7
ABCF1-202ENST00000376545 KRTAP9-8Q9BYQ0 159 aa4.43□□□□□ -1.7
ABCF1-202ENST00000376545 MT1FP04733 61 aa4.43□□□□□ -1.7
ABCF1-202ENST00000376545 KRTAP19-8Q3LI54 63 aa4.41□□□□□ -1.7
ABCF1-202ENST00000376545 M0R2T5 61 aa4.39□□□□□ -1.71
ABCF1-202ENST00000376545 PRO2289Q9P1D8 64 aa4.39□□□□□ -1.71
ABCF1-202ENST00000376545 UBR4Q5T4S7 5183 aa4.38□□□□□ -1.71
ABCF1-202ENST00000376545 KRTAP10-10P60014 251 aa4.36□□□□□ -1.71
ABCF1-202ENST00000376545 LCE3AQ5TA76 89 aa4.34□□□□□ -1.71
ABCF1-202ENST00000376545 MT1BP07438 61 aa4.32□□□□□ -1.72
ABCF1-202ENST00000376545 KRTAP10-5P60370 271 aa4.3□□□□□ -1.72
ABCF1-202ENST00000376545 KRTAP8-1Q8IUC2 63 aa4.29□□□□□ -1.72
ABCF1-202ENST00000376545 MT1XP80297 61 aa4.29□□□□□ -1.72
ABCF1-202ENST00000376545 LCE2AQ5TA79 106 aaPredicted RBP4.26□□□□□ -1.73
ABCF1-202ENST00000376545 KRTAP9-3Q9BYQ3 159 aa4.25□□□□□ -1.73
ABCF1-202ENST00000376545 KRTAP10-12P60413 245 aa4.16□□□□□ -1.74
ABCF1-202ENST00000376545 KRTAP10-7P60409 375 aaPredicted RBP4.14□□□□□ -1.75
ABCF1-202ENST00000376545 KRTAP12-3P60328 96 aa4.14□□□□□ -1.75
ABCF1-202ENST00000376545 INE1O15225 51 aa4.13□□□□□ -1.75
ABCF1-202ENST00000376545 LCE2DQ5TA82 110 aaPredicted RBP4.08□□□□□ -1.76
ABCF1-202ENST00000376545 LCE2BO14633 110 aa4.05□□□□□ -1.76
ABCF1-202ENST00000376545 USH2AO75445 5202 aa3.98□□□□□ -1.77
ABCF1-202ENST00000376545 FSIP2Q5CZC0 6907 aa3.98□□□□□ -1.77
ABCF1-202ENST00000376545 KRTAP19-5Q3LI72 72 aa3.96□□□□□ -1.78
ABCF1-202ENST00000376545 LCE3CQ5T5A8 94 aa3.92□□□□□ -1.78
ABCF1-202ENST00000376545 KRTAP4-8A0A0G2JLE6 195 aa3.86□□□□□ -1.79
ABCF1-202ENST00000376545 KRTAP4-8Q9BYQ9 185 aa3.86□□□□□ -1.79
ABCF1-202ENST00000376545 KMT2DO14686 5537 aa3.83□□□□□ -1.8
ABCF1-202ENST00000376545 KRTAP19-7Q3SYF9 63 aa3.83□□□□□ -1.8
ABCF1-202ENST00000376545 KRTAP19-4Q3LI73 84 aa3.8□□□□□ -1.8
ABCF1-202ENST00000376545 KRTAP9-6A8MVA2 160 aa3.79□□□□□ -1.8
ABCF1-202ENST00000376545 KRTAP19-6Q3LI70 58 aa3.75□□□□□ -1.81
ABCF1-202ENST00000376545 SSPOA2VEC9 5147 aa3.74□□□□□ -1.81
ABCF1-202ENST00000376545 MT1EP04732 61 aa3.7□□□□□ -1.82
ABCF1-202ENST00000376545 MT1LQ93083 61 aa3.7□□□□□ -1.82
ABCF1-202ENST00000376545 KRTAP2-3P0C7H8 128 aa3.7□□□□□ -1.82
ABCF1-202ENST00000376545 KRTAP2-4Q9BYR9 128 aa3.7□□□□□ -1.82
ABCF1-202ENST00000376545 KRTAP2-1Q9BYU5 128 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms