RNA–Protein interactions for RNA: ENST00000374946.7

TMEM235-201, Transcript of transmembrane protein 235, humanhuman

TSL 5 BASIC

Gene TMEM235, Length 2,409 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235-201ENST00000374946 RPL37P61927 97 aaKnown RBP9.97□□□□□ -0.81
TMEM235-201ENST00000374946 P0C880 135 aa9.96□□□□□ -0.81
TMEM235-201ENST00000374946 KRTAP10-6P60371 365 aaPredicted RBP9.96□□□□□ -0.81
TMEM235-201ENST00000374946 KRTAP13-4Q3LI77 160 aa9.94□□□□□ -0.82
TMEM235-201ENST00000374946 KRTAP3-3Q9BYR6 98 aa9.91□□□□□ -0.82
TMEM235-201ENST00000374946 DMBT1Q9UGM3 2413 aaPredicted RBP9.91□□□□□ -0.82
TMEM235-201ENST00000374946 A0A0D9SG42 100 aa9.91□□□□□ -0.82
TMEM235-201ENST00000374946 LRP1Q07954 4544 aaKnown RBP9.88□□□□□ -0.83
TMEM235-201ENST00000374946 TPRXLQ17RH7 258 aa9.86□□□□□ -0.83
TMEM235-201ENST00000374946 KRTAP3-2Q9BYR7 98 aa9.85□□□□□ -0.83
TMEM235-201ENST00000374946 HSPG2P98160 4391 aa9.81□□□□□ -0.84
TMEM235-201ENST00000374946 SPINT4Q6UDR6 99 aa9.78□□□□□ -0.84
TMEM235-201ENST00000374946 TNXBP22105 4242 aa9.76□□□□□ -0.85
TMEM235-201ENST00000374946 C10orf95Q9H7T3 257 aa9.76□□□□□ -0.85
TMEM235-201ENST00000374946 S4R3F8 94 aa9.73□□□□□ -0.85
TMEM235-201ENST00000374946 FAT3Q8TDW7 4589 aa9.72□□□□□ -0.85
TMEM235-201ENST00000374946 KRTAP10-8P60410 259 aa9.71□□□□□ -0.85
TMEM235-201ENST00000374946 KRTAP17-1Q9BYP8 105 aa9.7□□□□□ -0.86
TMEM235-201ENST00000374946 RYR1P21817 5038 aa9.67□□□□□ -0.86
TMEM235-201ENST00000374946 Q5VSD8 79 aa9.66□□□□□ -0.86
TMEM235-201ENST00000374946 KRTAP12-2P59991 146 aa9.65□□□□□ -0.86
TMEM235-201ENST00000374946 KIAA1109Q2LD37 5005 aa9.65□□□□□ -0.86
TMEM235-201ENST00000374946 MYCBP2O75592 4640 aa9.64□□□□□ -0.87
TMEM235-201ENST00000374946 EPPK1P58107 5090 aaKnown RBP9.62□□□□□ -0.87
TMEM235-201ENST00000374946 KRTAP15-1Q3LI76 137 aa9.6□□□□□ -0.87
TMEM235-201ENST00000374946 XP32Q5T750 250 aa9.56□□□□□ -0.88
TMEM235-201ENST00000374946 KRTAP12-1P59990 96 aa9.54□□□□□ -0.88
TMEM235-201ENST00000374946 NDUFAF8A1L188 74 aa9.52□□□□□ -0.89
TMEM235-201ENST00000374946 MT1HL1P0DM35 61 aa9.41□□□□□ -0.9
TMEM235-201ENST00000374946 M0QZ58 72 aa9.35□□□□□ -0.91
TMEM235-201ENST00000374946 LPAP08519 4548 aa9.29□□□□□ -0.92
TMEM235-201ENST00000374946 LRP2P98164 4655 aa9.26□□□□□ -0.93
TMEM235-201ENST00000374946 ABCA13Q86UQ4 5058 aa9.26□□□□□ -0.93
TMEM235-201ENST00000374946 KRTAP4-5Q9BYR2 181 aa9.25□□□□□ -0.93
TMEM235-201ENST00000374946 BIRC6Q9NR09 4857 aa9.17□□□□□ -0.94
TMEM235-201ENST00000374946 R4GN34 69 aa9.07□□□□□ -0.96
TMEM235-201ENST00000374946 HERC2O95714 4834 aa9.07□□□□□ -0.96
TMEM235-201ENST00000374946 PLAC4Q8WY50 150 aa8.99□□□□□ -0.97
TMEM235-201ENST00000374946 LORP23490 312 aaPredicted RBP8.93□□□□□ -0.98
TMEM235-201ENST00000374946 J3QL48 77 aa8.89□□□□□ -0.99
TMEM235-201ENST00000374946 PCLOQ9Y6V0 5065 aa8.83□□□□□ -1
TMEM235-201ENST00000374946 MUC17Q685J3 4493 aa8.79□□□□□ -1
TMEM235-201ENST00000374946 KRTAP4-1Q9BYQ7 146 aa8.75□□□□□ -1.01
TMEM235-201ENST00000374946 PP632Q6XCG6 107 aa8.71□□□□□ -1.01
TMEM235-201ENST00000374946 SEC61BP60468 96 aaKnown RBP8.69□□□□□ -1.02
TMEM235-201ENST00000374946 MUC2Q02817 5179 aa8.69□□□□□ -1.02
TMEM235-201ENST00000374946 CAMK2N1Q7Z7J9 78 aa8.66□□□□□ -1.02
TMEM235-201ENST00000374946 LUZP6Q538Z0 58 aa8.65□□□□□ -1.02
TMEM235-201ENST00000374946 HERC1Q15751 4861 aa8.61□□□□□ -1.03
TMEM235-201ENST00000374946 KRTAP19-2Q3LHN2 52 aa8.54□□□□□ -1.04
TMEM235-201ENST00000374946 A0A0A0MQY5 61 aa8.5□□□□□ -1.05
TMEM235-201ENST00000374946 HMCN2Q8NDA2 5059 aa8.44□□□□□ -1.06
TMEM235-201ENST00000374946 TNP1P09430 55 aa8.37□□□□□ -1.07
TMEM235-201ENST00000374946 FLGP20930 4061 aaPredicted RBP8.35□□□□□ -1.07
TMEM235-201ENST00000374946 KRTAP23-1A1A580 65 aa8.31□□□□□ -1.08
TMEM235-201ENST00000374946 SPRR5A0A1B0GTR4 108 aa8.3□□□□□ -1.08
TMEM235-201ENST00000374946 FAT4Q6V0I7 4981 aa8.26□□□□□ -1.09
TMEM235-201ENST00000374946 RNF213Q63HN8 5207 aa8.16□□□□□ -1.1
TMEM235-201ENST00000374946 UBR4Q5T4S7 5183 aa8.15□□□□□ -1.1
TMEM235-201ENST00000374946 LCE2CQ5TA81 110 aa8.12□□□□□ -1.11
TMEM235-201ENST00000374946 SPRR2GQ9BYE4 73 aa7.94□□□□□ -1.14
TMEM235-201ENST00000374946 LCE3AQ5TA76 89 aa7.91□□□□□ -1.14
TMEM235-201ENST00000374946 KRTAP19-1Q8IUB9 90 aa7.9□□□□□ -1.14
TMEM235-201ENST00000374946 MT1HP80294 61 aa7.88□□□□□ -1.15
TMEM235-201ENST00000374946 M0R2T5 61 aa7.86□□□□□ -1.15
TMEM235-201ENST00000374946 MT1FP04733 61 aa7.72□□□□□ -1.17
TMEM235-201ENST00000374946 MT2AP02795 61 aa7.71□□□□□ -1.17
TMEM235-201ENST00000374946 PRO2289Q9P1D8 64 aa7.71□□□□□ -1.18
TMEM235-201ENST00000374946 KRTAP8-1Q8IUC2 63 aa7.69□□□□□ -1.18
TMEM235-201ENST00000374946 KRTAP9-8Q9BYQ0 159 aa7.69□□□□□ -1.18
TMEM235-201ENST00000374946 KRTAP10-10P60014 251 aa7.67□□□□□ -1.18
TMEM235-201ENST00000374946 INE1O15225 51 aa7.59□□□□□ -1.19
TMEM235-201ENST00000374946 KRTAP19-8Q3LI54 63 aa7.51□□□□□ -1.21
TMEM235-201ENST00000374946 KRTAP12-3P60328 96 aa7.5□□□□□ -1.21
TMEM235-201ENST00000374946 KRTAP10-5P60370 271 aa7.5□□□□□ -1.21
TMEM235-201ENST00000374946 MT1XP80297 61 aa7.48□□□□□ -1.21
TMEM235-201ENST00000374946 KRTAP10-12P60413 245 aa7.44□□□□□ -1.22
TMEM235-201ENST00000374946 MT1BP07438 61 aa7.43□□□□□ -1.22
TMEM235-201ENST00000374946 LCE2AQ5TA79 106 aaPredicted RBP7.39□□□□□ -1.23
TMEM235-201ENST00000374946 KRTAP9-3Q9BYQ3 159 aa7.36□□□□□ -1.23
TMEM235-201ENST00000374946 KRTAP10-7P60409 375 aaPredicted RBP7.32□□□□□ -1.24
TMEM235-201ENST00000374946 USH2AO75445 5202 aa7.19□□□□□ -1.26
TMEM235-201ENST00000374946 LCE2BO14633 110 aa7.14□□□□□ -1.27
TMEM235-201ENST00000374946 LCE3CQ5T5A8 94 aa7.09□□□□□ -1.27
TMEM235-201ENST00000374946 KRTAP19-5Q3LI72 72 aa7.07□□□□□ -1.28
TMEM235-201ENST00000374946 KMT2DO14686 5537 aa6.94□□□□□ -1.3
TMEM235-201ENST00000374946 KRTAP9-6A8MVA2 160 aa6.91□□□□□ -1.3
TMEM235-201ENST00000374946 KRTAP4-8A0A0G2JLE6 195 aa6.79□□□□□ -1.32
TMEM235-201ENST00000374946 KRTAP4-8Q9BYQ9 185 aa6.79□□□□□ -1.32
TMEM235-201ENST00000374946 KRTAP2-3P0C7H8 128 aa6.77□□□□□ -1.33
TMEM235-201ENST00000374946 KRTAP2-4Q9BYR9 128 aa6.77□□□□□ -1.33
TMEM235-201ENST00000374946 KRTAP2-1Q9BYU5 128 aa6.77□□□□□ -1.33
TMEM235-201ENST00000374946 KRTAP4-7Q9BYR0 210 aa6.7□□□□□ -1.34
TMEM235-201ENST00000374946 FSIP2Q5CZC0 6907 aa6.69□□□□□ -1.34
TMEM235-201ENST00000374946 KRTAP19-7Q3SYF9 63 aa6.66□□□□□ -1.34
TMEM235-201ENST00000374946 SSPOA2VEC9 5147 aa6.66□□□□□ -1.34
TMEM235-201ENST00000374946 LCE2DQ5TA82 110 aaPredicted RBP6.65□□□□□ -1.35
TMEM235-201ENST00000374946 KRTAP19-6Q3LI70 58 aa6.5□□□□□ -1.37
TMEM235-201ENST00000374946 MT1LQ93083 61 aa6.49□□□□□ -1.37
TMEM235-201ENST00000374946 KRTAP19-4Q3LI73 84 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms