RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 M0R2T5 61 aa8.76□□□□□ -1.01
PFDN6-201ENST00000374606 KRTAP9-7A8MTY7 169 aa8.75□□□□□ -1.01
PFDN6-201ENST00000374606 SPANXA2-OT1Q8N9U9 137 aa8.75□□□□□ -1.01
PFDN6-201ENST00000374606 A8MUN3 132 aa8.73□□□□□ -1.01
PFDN6-201ENST00000374606 KRTAP3-1Q9BYR8 98 aa8.72□□□□□ -1.01
PFDN6-201ENST00000374606 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.71□□□□□ -1.02
PFDN6-201ENST00000374606 H1FX-AS1Q4G0G2 97 aa8.71□□□□□ -1.02
PFDN6-201ENST00000374606 DMAC1Q96GE9 116 aa8.71□□□□□ -1.02
PFDN6-201ENST00000374606 FLGP20930 4061 aaPredicted RBP8.7□□□□□ -1.02
PFDN6-201ENST00000374606 LCE2BO14633 110 aa8.61□□□□□ -1.03
PFDN6-201ENST00000374606 ACYP2P14621 99 aa8.61□□□□□ -1.03
PFDN6-201ENST00000374606 TMEM258P61165 79 aa8.61□□□□□ -1.03
PFDN6-201ENST00000374606 S4R3F8 94 aa8.6□□□□□ -1.03
PFDN6-201ENST00000374606 ATP5EP56381 51 aaPredicted RBP8.59□□□□□ -1.03
PFDN6-201ENST00000374606 SSPOA2VEC9 5147 aa8.55□□□□□ -1.04
PFDN6-201ENST00000374606 LCA10Q71F78 164 aa8.54□□□□□ -1.04
PFDN6-201ENST00000374606 USH2AO75445 5202 aa8.5□□□□□ -1.05
PFDN6-201ENST00000374606 CHKB-CPT1BH3BT56 60 aa8.5□□□□□ -1.05
PFDN6-201ENST00000374606 COA5Q86WW8 74 aa8.48□□□□□ -1.05
PFDN6-201ENST00000374606 CSAG1Q6PB30 78 aa8.43□□□□□ -1.06
PFDN6-201ENST00000374606 FCGBPQ9Y6R7 5405 aaPredicted RBP8.41□□□□□ -1.06
PFDN6-201ENST00000374606 SPTSSBQ8NFR3 76 aa8.4□□□□□ -1.06
PFDN6-201ENST00000374606 KRTAP9-8Q9BYQ0 159 aa8.36□□□□□ -1.07
PFDN6-201ENST00000374606 SERP1Q9Y6X1 66 aa8.33□□□□□ -1.08
PFDN6-201ENST00000374606 KRTAP19-1Q8IUB9 90 aa8.29□□□□□ -1.08
PFDN6-201ENST00000374606 SYNE2Q8WXH0 6885 aaKnown RBP8.22□□□□□ -1.09
PFDN6-201ENST00000374606 H0YAA0 97 aa8.21□□□□□ -1.1
PFDN6-201ENST00000374606 MT2AP02795 61 aa8.2□□□□□ -1.1
PFDN6-201ENST00000374606 MACF1Q9UPN3 7388 aaKnown RBP8.19□□□□□ -1.1
PFDN6-201ENST00000374606 ADM2Q7Z4H4 148 aa8.16□□□□□ -1.1
PFDN6-201ENST00000374606 RPS28P62857 69 aaKnown RBP8.14□□□□□ -1.11
PFDN6-201ENST00000374606 MT1FP04733 61 aa8.13□□□□□ -1.11
PFDN6-201ENST00000374606 KRTAP9-3Q9BYQ3 159 aa8.11□□□□□ -1.11
PFDN6-201ENST00000374606 KRTAP10-10P60014 251 aa8.1□□□□□ -1.11
PFDN6-201ENST00000374606 SEC61GP60059 68 aa8.1□□□□□ -1.11
PFDN6-201ENST00000374606 SMIM26A0A096LP01 95 aa8.07□□□□□ -1.12
PFDN6-201ENST00000374606 P0C880 135 aa8.05□□□□□ -1.12
PFDN6-201ENST00000374606 A0A1B0GU69 56 aa8.04□□□□□ -1.12
PFDN6-201ENST00000374606 LINC01558Q9Y6Z2 57 aa8.04□□□□□ -1.12
PFDN6-201ENST00000374606 KRTAP19-6Q3LI70 58 aa8.01□□□□□ -1.13
PFDN6-201ENST00000374606 PRR15LQ9BU68 103 aa8□□□□□ -1.13
PFDN6-201ENST00000374606 V9GYY9 64 aa8□□□□□ -1.13
PFDN6-201ENST00000374606 KRTAP6-3Q3LI67 103 aa7.97□□□□□ -1.13
PFDN6-201ENST00000374606 CRIPTQ9P021 101 aa7.97□□□□□ -1.13
PFDN6-201ENST00000374606 Q1T7F1 81 aa7.96□□□□□ -1.14
PFDN6-201ENST00000374606 R4GN34 69 aa7.91□□□□□ -1.14
PFDN6-201ENST00000374606 M0QZ58 72 aa7.89□□□□□ -1.15
PFDN6-201ENST00000374606 A0A1B0GU33 70 aa7.88□□□□□ -1.15
PFDN6-201ENST00000374606 PSPHP1O15172 72 aa7.86□□□□□ -1.15
PFDN6-201ENST00000374606 SPRR2GQ9BYE4 73 aa7.85□□□□□ -1.15
PFDN6-201ENST00000374606 NEBP20929 6669 aa7.82□□□□□ -1.16
PFDN6-201ENST00000374606 KRTAP13-4Q3LI77 160 aa7.78□□□□□ -1.16
PFDN6-201ENST00000374606 Q5VV11 94 aa7.78□□□□□ -1.16
PFDN6-201ENST00000374606 SPATA8Q6RVD6 105 aa7.75□□□□□ -1.17
PFDN6-201ENST00000374606 LINC01554Q52M75 96 aa7.74□□□□□ -1.17
PFDN6-201ENST00000374606 UQCR11O14957 56 aa7.73□□□□□ -1.17
PFDN6-201ENST00000374606 KRTAP19-8Q3LI54 63 aa7.69□□□□□ -1.18
PFDN6-201ENST00000374606 MUC12Q9UKN1 5478 aa7.67□□□□□ -1.18
PFDN6-201ENST00000374606 A0A0D9SG42 100 aa7.64□□□□□ -1.19
PFDN6-201ENST00000374606 A6NED7 52 aa7.64□□□□□ -1.19
PFDN6-201ENST00000374606 KRTAP20-1Q3LI63 56 aa7.64□□□□□ -1.19
PFDN6-201ENST00000374606 MIR22HGQ0VDD5 57 aa7.62□□□□□ -1.19
PFDN6-201ENST00000374606 H3BS24 57 aa7.61□□□□□ -1.19
PFDN6-201ENST00000374606 A8MU10 97 aa7.6□□□□□ -1.19
PFDN6-201ENST00000374606 MT1BP07438 61 aa7.6□□□□□ -1.19
PFDN6-201ENST00000374606 A6NN06 94 aa7.58□□□□□ -1.2
PFDN6-201ENST00000374606 PLAC4Q8WY50 150 aa7.56□□□□□ -1.2
PFDN6-201ENST00000374606 SPINT4Q6UDR6 99 aa7.5□□□□□ -1.21
PFDN6-201ENST00000374606 KRTAP12-1P59990 96 aa7.49□□□□□ -1.21
PFDN6-201ENST00000374606 CDC42SE1Q9NRR8 79 aa7.45□□□□□ -1.22
PFDN6-201ENST00000374606 KRTAP12-2P59991 146 aa7.44□□□□□ -1.22
PFDN6-201ENST00000374606 MDN1Q9NU22 5596 aa7.39□□□□□ -1.23
PFDN6-201ENST00000374606 CAMK2N1Q7Z7J9 78 aa7.39□□□□□ -1.23
PFDN6-201ENST00000374606 KRTAP5-9P26371 169 aa7.38□□□□□ -1.23
PFDN6-201ENST00000374606 K7ERS5 55 aa7.37□□□□□ -1.23
PFDN6-201ENST00000374606 KMT2DO14686 5537 aa7.36□□□□□ -1.23
PFDN6-201ENST00000374606 BRK1Q8WUW1 75 aa7.33□□□□□ -1.24
PFDN6-201ENST00000374606 PRO2289Q9P1D8 64 aa7.31□□□□□ -1.24
PFDN6-201ENST00000374606 KRTAP10-5P60370 271 aa7.3□□□□□ -1.24
PFDN6-201ENST00000374606 MT1XP80297 61 aa7.29□□□□□ -1.24
PFDN6-201ENST00000374606 KRTAP2-3P0C7H8 128 aa7.28□□□□□ -1.24
PFDN6-201ENST00000374606 KRTAP2-4Q9BYR9 128 aa7.28□□□□□ -1.24
PFDN6-201ENST00000374606 C10orf95Q9H7T3 257 aa7.09□□□□□ -1.27
PFDN6-201ENST00000374606 SPRR2EP22531 72 aa7.07□□□□□ -1.28
PFDN6-201ENST00000374606 SPRR2BP35325 72 aa7.07□□□□□ -1.28
PFDN6-201ENST00000374606 SPRR2AP35326 72 aa7.07□□□□□ -1.28
PFDN6-201ENST00000374606 SPRR2FQ96RM1 72 aa7.05□□□□□ -1.28
PFDN6-201ENST00000374606 KRTAP2-2Q9BYT5 123 aa7.02□□□□□ -1.29
PFDN6-201ENST00000374606 KRTAP2-1Q9BYU5 128 aa7.02□□□□□ -1.29
PFDN6-201ENST00000374606 PRO0628Q9UI54 55 aa6.99□□□□□ -1.29
PFDN6-201ENST00000374606 ROMO1P60602 79 aa6.98□□□□□ -1.29
PFDN6-201ENST00000374606 KRTAP10-7P60409 375 aaPredicted RBP6.97□□□□□ -1.29
PFDN6-201ENST00000374606 TNP1P09430 55 aa6.96□□□□□ -1.3
PFDN6-201ENST00000374606 KRTAP10-12P60413 245 aa6.92□□□□□ -1.3
PFDN6-201ENST00000374606 PMAIP1Q13794 54 aa6.9□□□□□ -1.3
PFDN6-201ENST00000374606 KRTAP25-1Q3LHN0 102 aa6.9□□□□□ -1.3
PFDN6-201ENST00000374606 LCE1AQ5T7P2 110 aa6.89□□□□□ -1.31
PFDN6-201ENST00000374606 KRTAP8-1Q8IUC2 63 aa6.85□□□□□ -1.31
PFDN6-201ENST00000374606 SPRR2DP22532 72 aa6.84□□□□□ -1.31
PFDN6-201ENST00000374606 KRTAP4-8A0A0G2JLE6 195 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms