RNA–Protein interactions for RNA: ENST00000374165.5

C9orf43-202, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,049 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-202ENST00000374165 LCE2CQ5TA81 110 aa8.81□□□□□ -1
C9orf43-202ENST00000374165 V9GYY9 64 aa8.81□□□□□ -1
C9orf43-202ENST00000374165 RBM12B-AS1Q9P1G2 102 aa8.8□□□□□ -1
C9orf43-202ENST00000374165 PSPHP1O15172 72 aa8.77□□□□□ -1.01
C9orf43-202ENST00000374165 LINC01558Q9Y6Z2 57 aa8.74□□□□□ -1.01
C9orf43-202ENST00000374165 PRR15LQ9BU68 103 aa8.71□□□□□ -1.01
C9orf43-202ENST00000374165 FLGP20930 4061 aaPredicted RBP8.7□□□□□ -1.02
C9orf43-202ENST00000374165 Q5VV11 94 aa8.68□□□□□ -1.02
C9orf43-202ENST00000374165 H1FX-AS1Q4G0G2 97 aa8.66□□□□□ -1.02
C9orf43-202ENST00000374165 MT1HP80294 61 aa8.62□□□□□ -1.03
C9orf43-202ENST00000374165 SPTSSBQ8NFR3 76 aa8.62□□□□□ -1.03
C9orf43-202ENST00000374165 A0A1B0GU69 56 aa8.58□□□□□ -1.04
C9orf43-202ENST00000374165 LCA10Q71F78 164 aa8.58□□□□□ -1.04
C9orf43-202ENST00000374165 KRTAP3-3Q9BYR6 98 aa8.56□□□□□ -1.04
C9orf43-202ENST00000374165 S4R3F8 94 aa8.54□□□□□ -1.04
C9orf43-202ENST00000374165 LCE2AQ5TA79 106 aaPredicted RBP8.52□□□□□ -1.05
C9orf43-202ENST00000374165 BRK1Q8WUW1 75 aa8.51□□□□□ -1.05
C9orf43-202ENST00000374165 A6NED7 52 aa8.47□□□□□ -1.05
C9orf43-202ENST00000374165 M0R2T5 61 aa8.47□□□□□ -1.05
C9orf43-202ENST00000374165 SEC61GP60059 68 aa8.45□□□□□ -1.06
C9orf43-202ENST00000374165 A8MU10 97 aa8.4□□□□□ -1.06
C9orf43-202ENST00000374165 CSAG1Q6PB30 78 aa8.36□□□□□ -1.07
C9orf43-202ENST00000374165 PRO0628Q9UI54 55 aa8.36□□□□□ -1.07
C9orf43-202ENST00000374165 KRTAP10-6P60371 365 aaPredicted RBP8.34□□□□□ -1.07
C9orf43-202ENST00000374165 UQCR11O14957 56 aa8.33□□□□□ -1.08
C9orf43-202ENST00000374165 CDC42SE1Q9NRR8 79 aa8.33□□□□□ -1.08
C9orf43-202ENST00000374165 LORP23490 312 aaPredicted RBP8.32□□□□□ -1.08
C9orf43-202ENST00000374165 KRTAP9-8Q9BYQ0 159 aa8.28□□□□□ -1.08
C9orf43-202ENST00000374165 KRTAP3-2Q9BYR7 98 aa8.28□□□□□ -1.08
C9orf43-202ENST00000374165 A0A1B0GU33 70 aa8.27□□□□□ -1.09
C9orf43-202ENST00000374165 MIR22HGQ0VDD5 57 aa8.25□□□□□ -1.09
C9orf43-202ENST00000374165 SPATA8Q6RVD6 105 aa8.25□□□□□ -1.09
C9orf43-202ENST00000374165 P0C880 135 aa8.21□□□□□ -1.1
C9orf43-202ENST00000374165 ADM2Q7Z4H4 148 aa8.2□□□□□ -1.1
C9orf43-202ENST00000374165 H0YAA0 97 aa8.2□□□□□ -1.1
C9orf43-202ENST00000374165 MT2AP02795 61 aa8.2□□□□□ -1.1
C9orf43-202ENST00000374165 MT1FP04733 61 aa8.17□□□□□ -1.1
C9orf43-202ENST00000374165 KRTAP10-10P60014 251 aa8.1□□□□□ -1.11
C9orf43-202ENST00000374165 KRTAP13-4Q3LI77 160 aa8.1□□□□□ -1.11
C9orf43-202ENST00000374165 PMAIP1Q13794 54 aa8.03□□□□□ -1.12
C9orf43-202ENST00000374165 KRTAP9-3Q9BYQ3 159 aa7.98□□□□□ -1.13
C9orf43-202ENST00000374165 SVIPQ8NHG7 77 aa7.97□□□□□ -1.13
C9orf43-202ENST00000374165 A6NN06 94 aa7.96□□□□□ -1.13
C9orf43-202ENST00000374165 A0A0D9SG42 100 aa7.95□□□□□ -1.14
C9orf43-202ENST00000374165 M0QZ58 72 aa7.95□□□□□ -1.14
C9orf43-202ENST00000374165 KRTAP19-1Q8IUB9 90 aa7.91□□□□□ -1.14
C9orf43-202ENST00000374165 R4GN34 69 aa7.9□□□□□ -1.14
C9orf43-202ENST00000374165 SPRR2GQ9BYE4 73 aa7.85□□□□□ -1.15
C9orf43-202ENST00000374165 CRIPTQ9P021 101 aa7.85□□□□□ -1.15
C9orf43-202ENST00000374165 LCE2BO14633 110 aa7.84□□□□□ -1.15
C9orf43-202ENST00000374165 FSIP2Q5CZC0 6907 aa7.83□□□□□ -1.16
C9orf43-202ENST00000374165 K7ERS5 55 aa7.81□□□□□ -1.16
C9orf43-202ENST00000374165 LINC01554Q52M75 96 aa7.79□□□□□ -1.16
C9orf43-202ENST00000374165 USH2AO75445 5202 aa7.78□□□□□ -1.16
C9orf43-202ENST00000374165 KRTAP12-2P59991 146 aa7.78□□□□□ -1.16
C9orf43-202ENST00000374165 LCE2DQ5TA82 110 aaPredicted RBP7.78□□□□□ -1.16
C9orf43-202ENST00000374165 KRTAP12-1P59990 96 aa7.78□□□□□ -1.16
C9orf43-202ENST00000374165 SPINT4Q6UDR6 99 aa7.74□□□□□ -1.17
C9orf43-202ENST00000374165 KTN1-AS1Q86SY8 53 aa7.73□□□□□ -1.17
C9orf43-202ENST00000374165 KRTAP9-2Q9BYQ4 174 aa7.71□□□□□ -1.17
C9orf43-202ENST00000374165 KRTAP19-8Q3LI54 63 aa7.68□□□□□ -1.18
C9orf43-202ENST00000374165 MT1BP07438 61 aa7.66□□□□□ -1.18
C9orf43-202ENST00000374165 SSPOA2VEC9 5147 aa7.59□□□□□ -1.2
C9orf43-202ENST00000374165 ROMO1P60602 79 aa7.55□□□□□ -1.2
C9orf43-202ENST00000374165 PRAC1Q96KF2 57 aa7.54□□□□□ -1.2
C9orf43-202ENST00000374165 PLAC4Q8WY50 150 aa7.47□□□□□ -1.21
C9orf43-202ENST00000374165 CAMK2N1Q7Z7J9 78 aa7.41□□□□□ -1.22
C9orf43-202ENST00000374165 KRTAP19-6Q3LI70 58 aa7.37□□□□□ -1.23
C9orf43-202ENST00000374165 CRCT1Q9UGL9 99 aa7.37□□□□□ -1.23
C9orf43-202ENST00000374165 C10orf95Q9H7T3 257 aa7.35□□□□□ -1.23
C9orf43-202ENST00000374165 MT1XP80297 61 aa7.34□□□□□ -1.23
C9orf43-202ENST00000374165 KRTAP10-5P60370 271 aa7.32□□□□□ -1.24
C9orf43-202ENST00000374165 FCGBPQ9Y6R7 5405 aaPredicted RBP7.3□□□□□ -1.24
C9orf43-202ENST00000374165 KRTAP25-1Q3LHN0 102 aa7.3□□□□□ -1.24
C9orf43-202ENST00000374165 KRTAP9-6A0A140TA67 174 aa7.2□□□□□ -1.26
C9orf43-202ENST00000374165 PRO2289Q9P1D8 64 aa7.19□□□□□ -1.26
C9orf43-202ENST00000374165 TNP1P09430 55 aa7.06□□□□□ -1.28
C9orf43-202ENST00000374165 KRTAP10-7P60409 375 aaPredicted RBP7.05□□□□□ -1.28
C9orf43-202ENST00000374165 MACF1Q9UPN3 7388 aaKnown RBP7.04□□□□□ -1.28
C9orf43-202ENST00000374165 KMT2DO14686 5537 aa7.03□□□□□ -1.28
C9orf43-202ENST00000374165 KRTAP10-12P60413 245 aa6.93□□□□□ -1.3
C9orf43-202ENST00000374165 PP632Q6XCG6 107 aa6.91□□□□□ -1.3
C9orf43-202ENST00000374165 SYNE2Q8WXH0 6885 aaKnown RBP6.9□□□□□ -1.31
C9orf43-202ENST00000374165 KRTAP4-8A0A0G2JLE6 195 aa6.89□□□□□ -1.31
C9orf43-202ENST00000374165 KRTAP4-8Q9BYQ9 185 aa6.89□□□□□ -1.31
C9orf43-202ENST00000374165 KRTAP23-1A1A580 65 aa6.85□□□□□ -1.31
C9orf43-202ENST00000374165 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.84□□□□□ -1.31
C9orf43-202ENST00000374165 LCE3AQ5TA76 89 aa6.77□□□□□ -1.32
C9orf43-202ENST00000374165 KRTAP8-1Q8IUC2 63 aa6.69□□□□□ -1.34
C9orf43-202ENST00000374165 MUC12Q9UKN1 5478 aa6.58□□□□□ -1.36
C9orf43-202ENST00000374165 KRTAP19-7Q3SYF9 63 aa6.56□□□□□ -1.36
C9orf43-202ENST00000374165 KRTAP9-7A8MTY7 169 aa6.55□□□□□ -1.36
C9orf43-202ENST00000374165 KRTAP19-5Q3LI72 72 aa6.55□□□□□ -1.36
C9orf43-202ENST00000374165 KRTAP5-9P26371 169 aa6.55□□□□□ -1.36
C9orf43-202ENST00000374165 KRTAP6-3Q3LI67 103 aa6.55□□□□□ -1.36
C9orf43-202ENST00000374165 SPRR2FQ96RM1 72 aa6.54□□□□□ -1.36
C9orf43-202ENST00000374165 KRTAP15-1Q3LI76 137 aa6.5□□□□□ -1.37
C9orf43-202ENST00000374165 KRTAP12-3P60328 96 aa6.49□□□□□ -1.37
C9orf43-202ENST00000374165 MDN1Q9NU22 5596 aa6.45□□□□□ -1.38
C9orf43-202ENST00000374165 MT1EP04732 61 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms