RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 C9orf92A6NGG3 77 aa10.07□□□□□ -0.8
VEGFA-206ENST00000372077 TPRXLQ17RH7 258 aa10□□□□□ -0.81
VEGFA-206ENST00000372077 ACYP2P14621 99 aa9.97□□□□□ -0.81
VEGFA-206ENST00000372077 C20orf166-AS1Q96NR2 134 aa9.97□□□□□ -0.81
VEGFA-206ENST00000372077 A8MUU9 505 aa9.96□□□□□ -0.82
VEGFA-206ENST00000372077 XP32Q5T750 250 aa9.93□□□□□ -0.82
VEGFA-206ENST00000372077 CSAG1Q6PB30 78 aa9.92□□□□□ -0.82
VEGFA-206ENST00000372077 DMAC1Q96GE9 116 aa9.88□□□□□ -0.83
VEGFA-206ENST00000372077 HERC1Q15751 4861 aa9.86□□□□□ -0.83
VEGFA-206ENST00000372077 A0A1B0GU69 56 aa9.86□□□□□ -0.83
VEGFA-206ENST00000372077 RPL37P61927 97 aaKnown RBP9.85□□□□□ -0.83
VEGFA-206ENST00000372077 LPAP08519 4548 aa9.84□□□□□ -0.83
VEGFA-206ENST00000372077 SPATA8Q6RVD6 105 aa9.77□□□□□ -0.85
VEGFA-206ENST00000372077 HMCN2Q8NDA2 5059 aa9.76□□□□□ -0.85
VEGFA-206ENST00000372077 LRP2P98164 4655 aa9.74□□□□□ -0.85
VEGFA-206ENST00000372077 MIR22HGQ0VDD5 57 aa9.7□□□□□ -0.86
VEGFA-206ENST00000372077 UQCR11O14957 56 aa9.64□□□□□ -0.87
VEGFA-206ENST00000372077 SEC61BP60468 96 aaKnown RBP9.64□□□□□ -0.87
VEGFA-206ENST00000372077 ROMO1P60602 79 aa9.64□□□□□ -0.87
VEGFA-206ENST00000372077 MUC17Q685J3 4493 aa9.62□□□□□ -0.87
VEGFA-206ENST00000372077 KRTAP3-1Q9BYR8 98 aa9.52□□□□□ -0.89
VEGFA-206ENST00000372077 KRTAP25-1Q3LHN0 102 aa9.48□□□□□ -0.89
VEGFA-206ENST00000372077 KRTAP4-1Q9BYQ7 146 aa9.48□□□□□ -0.89
VEGFA-206ENST00000372077 P0C880 135 aa9.41□□□□□ -0.9
VEGFA-206ENST00000372077 H0YAA0 97 aa9.37□□□□□ -0.91
VEGFA-206ENST00000372077 CRIPTQ9P021 101 aa9.37□□□□□ -0.91
VEGFA-206ENST00000372077 COX6B2Q6YFQ2 88 aa9.32□□□□□ -0.92
VEGFA-206ENST00000372077 A0A0A0MQY5 61 aa9.31□□□□□ -0.92
VEGFA-206ENST00000372077 A0A1B0GU33 70 aa9.29□□□□□ -0.92
VEGFA-206ENST00000372077 UBR4Q5T4S7 5183 aa9.27□□□□□ -0.93
VEGFA-206ENST00000372077 A0A0D9SG42 100 aa9.23□□□□□ -0.93
VEGFA-206ENST00000372077 KRTAP19-2Q3LHN2 52 aa9.22□□□□□ -0.93
VEGFA-206ENST00000372077 RNF213Q63HN8 5207 aa9.2□□□□□ -0.94
VEGFA-206ENST00000372077 MUC2Q02817 5179 aa9.2□□□□□ -0.94
VEGFA-206ENST00000372077 H1FX-AS1Q4G0G2 97 aa9.19□□□□□ -0.94
VEGFA-206ENST00000372077 NDUFAF8A1L188 74 aa9.09□□□□□ -0.95
VEGFA-206ENST00000372077 KRTAP13-4Q3LI77 160 aa9.07□□□□□ -0.96
VEGFA-206ENST00000372077 LCE2CQ5TA81 110 aa9.07□□□□□ -0.96
VEGFA-206ENST00000372077 SPINT4Q6UDR6 99 aa9.06□□□□□ -0.96
VEGFA-206ENST00000372077 KRTAP3-3Q9BYR6 98 aa9.05□□□□□ -0.96
VEGFA-206ENST00000372077 S4R3F8 94 aa9.02□□□□□ -0.97
VEGFA-206ENST00000372077 KRTAP10-6P60371 365 aaPredicted RBP8.98□□□□□ -0.97
VEGFA-206ENST00000372077 FLGP20930 4061 aaPredicted RBP8.95□□□□□ -0.98
VEGFA-206ENST00000372077 K7ERS5 55 aa8.91□□□□□ -0.98
VEGFA-206ENST00000372077 FAT4Q6V0I7 4981 aa8.9□□□□□ -0.98
VEGFA-206ENST00000372077 KRTAP3-2Q9BYR7 98 aa8.9□□□□□ -0.98
VEGFA-206ENST00000372077 MT1HP80294 61 aa8.88□□□□□ -0.99
VEGFA-206ENST00000372077 KRTAP15-1Q3LI76 137 aa8.85□□□□□ -0.99
VEGFA-206ENST00000372077 C10orf95Q9H7T3 257 aa8.85□□□□□ -0.99
VEGFA-206ENST00000372077 KRTAP12-2P59991 146 aa8.75□□□□□ -1.01
VEGFA-206ENST00000372077 M0R2T5 61 aa8.72□□□□□ -1.01
VEGFA-206ENST00000372077 LCE2AQ5TA79 106 aaPredicted RBP8.69□□□□□ -1.02
VEGFA-206ENST00000372077 LUZP6Q538Z0 58 aa8.65□□□□□ -1.03
VEGFA-206ENST00000372077 KRTAP12-1P59990 96 aa8.56□□□□□ -1.04
VEGFA-206ENST00000372077 LORP23490 312 aaPredicted RBP8.54□□□□□ -1.04
VEGFA-206ENST00000372077 KRTAP9-8Q9BYQ0 159 aa8.54□□□□□ -1.04
VEGFA-206ENST00000372077 M0QZ58 72 aa8.52□□□□□ -1.05
VEGFA-206ENST00000372077 MT2AP02795 61 aa8.48□□□□□ -1.05
VEGFA-206ENST00000372077 MT1FP04733 61 aa8.43□□□□□ -1.06
VEGFA-206ENST00000372077 R4GN34 69 aa8.43□□□□□ -1.06
VEGFA-206ENST00000372077 KRTAP10-10P60014 251 aa8.38□□□□□ -1.07
VEGFA-206ENST00000372077 KRTAP9-3Q9BYQ3 159 aa8.24□□□□□ -1.09
VEGFA-206ENST00000372077 SPRR2GQ9BYE4 73 aa8.23□□□□□ -1.09
VEGFA-206ENST00000372077 KRTAP19-1Q8IUB9 90 aa8.22□□□□□ -1.09
VEGFA-206ENST00000372077 CAMK2N1Q7Z7J9 78 aa8.07□□□□□ -1.12
VEGFA-206ENST00000372077 KRTAP19-8Q3LI54 63 aa8.06□□□□□ -1.12
VEGFA-206ENST00000372077 PLAC4Q8WY50 150 aa8.06□□□□□ -1.12
VEGFA-206ENST00000372077 LCE2BO14633 110 aa8.03□□□□□ -1.12
VEGFA-206ENST00000372077 LCE2DQ5TA82 110 aaPredicted RBP7.97□□□□□ -1.13
VEGFA-206ENST00000372077 MT1BP07438 61 aa7.95□□□□□ -1.14
VEGFA-206ENST00000372077 USH2AO75445 5202 aa7.8□□□□□ -1.16
VEGFA-206ENST00000372077 KRTAP9-2Q9BYQ4 174 aa7.72□□□□□ -1.17
VEGFA-206ENST00000372077 MT1XP80297 61 aa7.65□□□□□ -1.19
VEGFA-206ENST00000372077 KRTAP10-5P60370 271 aa7.63□□□□□ -1.19
VEGFA-206ENST00000372077 KRTAP19-6Q3LI70 58 aa7.6□□□□□ -1.19
VEGFA-206ENST00000372077 SSPOA2VEC9 5147 aa7.57□□□□□ -1.2
VEGFA-206ENST00000372077 TNP1P09430 55 aa7.56□□□□□ -1.2
VEGFA-206ENST00000372077 PRO2289Q9P1D8 64 aa7.56□□□□□ -1.2
VEGFA-206ENST00000372077 PP632Q6XCG6 107 aa7.51□□□□□ -1.21
VEGFA-206ENST00000372077 FSIP2Q5CZC0 6907 aa7.5□□□□□ -1.21
VEGFA-206ENST00000372077 CRCT1Q9UGL9 99 aa7.42□□□□□ -1.22
VEGFA-206ENST00000372077 LCE3AQ5TA76 89 aa7.34□□□□□ -1.23
VEGFA-206ENST00000372077 KRTAP10-7P60409 375 aaPredicted RBP7.32□□□□□ -1.24
VEGFA-206ENST00000372077 FCGBPQ9Y6R7 5405 aaPredicted RBP7.29□□□□□ -1.24
VEGFA-206ENST00000372077 KRTAP10-12P60413 245 aa7.27□□□□□ -1.25
VEGFA-206ENST00000372077 KMT2DO14686 5537 aa7.26□□□□□ -1.25
VEGFA-206ENST00000372077 SPRR5A0A1B0GTR4 108 aa7.24□□□□□ -1.25
VEGFA-206ENST00000372077 KRTAP9-6A0A140TA67 174 aa7.19□□□□□ -1.26
VEGFA-206ENST00000372077 INE1O15225 51 aa7.12□□□□□ -1.27
VEGFA-206ENST00000372077 KRTAP23-1A1A580 65 aa7.11□□□□□ -1.27
VEGFA-206ENST00000372077 KRTAP4-8A0A0G2JLE6 195 aa7.08□□□□□ -1.28
VEGFA-206ENST00000372077 KRTAP4-8Q9BYQ9 185 aa7.08□□□□□ -1.28
VEGFA-206ENST00000372077 KRTAP8-1Q8IUC2 63 aa6.95□□□□□ -1.3
VEGFA-206ENST00000372077 MACF1Q9UPN3 7388 aaKnown RBP6.93□□□□□ -1.3
VEGFA-206ENST00000372077 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.88□□□□□ -1.31
VEGFA-206ENST00000372077 KRTAP12-3P60328 96 aa6.88□□□□□ -1.31
VEGFA-206ENST00000372077 KRTAP19-5Q3LI72 72 aa6.85□□□□□ -1.31
VEGFA-206ENST00000372077 KRTAP19-7Q3SYF9 63 aa6.83□□□□□ -1.32
VEGFA-206ENST00000372077 KRTAP5-9P26371 169 aa6.72□□□□□ -1.33
VEGFA-206ENST00000372077 MT1EP04732 61 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms