RNA–Protein interactions for RNA: ENST00000371039.5

SGIP1-204, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SGIP1, Length 4,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-204ENST00000371039 ACYP2P14621 99 aa2.62□□□□□ -1.99
SGIP1-204ENST00000371039 C14orf177Q52M58 125 aa2.62□□□□□ -1.99
SGIP1-204ENST00000371039 TYMSOSQ8TAI1 123 aa2.62□□□□□ -1.99
SGIP1-204ENST00000371039 LINC00304Q8N9R0 145 aa2.61□□□□□ -1.99
SGIP1-204ENST00000371039 RYR2Q92736 4967 aa2.59□□□□□ -1.99
SGIP1-204ENST00000371039 IGKV2D-30A0A075B6S6 120 aa2.59□□□□□ -1.99
SGIP1-204ENST00000371039 KRTAP23-1A1A580 65 aa2.58□□□□□ -2
SGIP1-204ENST00000371039 SSBP3-AS1Q7Z2R9 100 aa2.58□□□□□ -2
SGIP1-204ENST00000371039 CRIPTQ9P021 101 aa2.57□□□□□ -2
SGIP1-204ENST00000371039 KRTAP10-1P60331 282 aa2.57□□□□□ -2
SGIP1-204ENST00000371039 Q8N1X5 172 aa2.56□□□□□ -2
SGIP1-204ENST00000371039 RYR1P21817 5038 aa2.56□□□□□ -2
SGIP1-204ENST00000371039 A0A1B0GU33 70 aa2.55□□□□□ -2
SGIP1-204ENST00000371039 LRP2P98164 4655 aa2.54□□□□□ -2
SGIP1-204ENST00000371039 RYR3Q15413 4870 aa2.54□□□□□ -2
SGIP1-204ENST00000371039 KRTAP10-4P60372 401 aaPredicted RBP2.54□□□□□ -2
SGIP1-204ENST00000371039 KRTAP13-4Q3LI77 160 aa2.54□□□□□ -2
SGIP1-204ENST00000371039 KRTAP3-3Q9BYR6 98 aa2.54□□□□□ -2
SGIP1-204ENST00000371039 ABCA13Q86UQ4 5058 aa2.54□□□□□ -2
SGIP1-204ENST00000371039 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.52□□□□□ -2.01
SGIP1-204ENST00000371039 A0A1B0GVY2 172 aa2.52□□□□□ -2.01
SGIP1-204ENST00000371039 KRTAP10-6P60371 365 aaPredicted RBP2.52□□□□□ -2.01
SGIP1-204ENST00000371039 KRTAP3-2Q9BYR7 98 aa2.52□□□□□ -2.01
SGIP1-204ENST00000371039 SPINK1P00995 79 aa2.5□□□□□ -2.01
SGIP1-204ENST00000371039 BIRC6Q9NR09 4857 aa2.5□□□□□ -2.01
SGIP1-204ENST00000371039 KRTAP9-2Q9BYQ4 174 aa2.49□□□□□ -2.01
SGIP1-204ENST00000371039 TPRXLQ17RH7 258 aa2.49□□□□□ -2.01
SGIP1-204ENST00000371039 MUC17Q685J3 4493 aa2.48□□□□□ -2.01
SGIP1-204ENST00000371039 Q5VSD8 79 aa2.48□□□□□ -2.01
SGIP1-204ENST00000371039 KRTAP10-8P60410 259 aa2.48□□□□□ -2.01
SGIP1-204ENST00000371039 H1FX-AS1Q4G0G2 97 aa2.47□□□□□ -2.01
SGIP1-204ENST00000371039 COX6B2Q6YFQ2 88 aa2.47□□□□□ -2.01
SGIP1-204ENST00000371039 KRTAP4-8A0A0G2JLE6 195 aa2.47□□□□□ -2.01
SGIP1-204ENST00000371039 KRTAP4-7Q9BYR0 210 aa2.47□□□□□ -2.01
SGIP1-204ENST00000371039 PRO2289Q9P1D8 64 aa2.45□□□□□ -2.02
SGIP1-204ENST00000371039 SMR3BP02814 79 aaPredicted RBP2.45□□□□□ -2.02
SGIP1-204ENST00000371039 C9orf92A6NGG3 77 aa2.44□□□□□ -2.02
SGIP1-204ENST00000371039 R4GN34 69 aa2.43□□□□□ -2.02
SGIP1-204ENST00000371039 KRTAP9-6A0A140TA67 174 aa2.43□□□□□ -2.02
SGIP1-204ENST00000371039 KIAA1109Q2LD37 5005 aa2.43□□□□□ -2.02
SGIP1-204ENST00000371039 C10orf95Q9H7T3 257 aa2.42□□□□□ -2.02
SGIP1-204ENST00000371039 EPPK1P58107 5090 aaKnown RBP2.42□□□□□ -2.02
SGIP1-204ENST00000371039 RPS29P62273 56 aaKnown RBP2.42□□□□□ -2.02
SGIP1-204ENST00000371039 KRTAP5-3Q6L8H2 238 aa2.42□□□□□ -2.02
SGIP1-204ENST00000371039 KRTAP4-12Q9BQ66 201 aa2.42□□□□□ -2.02
SGIP1-204ENST00000371039 KRTAP12-2P59991 146 aa2.41□□□□□ -2.02
SGIP1-204ENST00000371039 MUC2Q02817 5179 aa2.41□□□□□ -2.02
SGIP1-204ENST00000371039 KRTAP9-9Q9BYP9 154 aa2.41□□□□□ -2.02
SGIP1-204ENST00000371039 KRTAP9-4Q9BYQ2 154 aa2.41□□□□□ -2.02
SGIP1-204ENST00000371039 KRTAP4-2Q9BYR5 136 aa2.41□□□□□ -2.02
SGIP1-204ENST00000371039 FLGP20930 4061 aaPredicted RBP2.38□□□□□ -2.03
SGIP1-204ENST00000371039 KRTAP4-5Q9BYR2 181 aa2.38□□□□□ -2.03
SGIP1-204ENST00000371039 DMBT1Q9UGM3 2413 aaPredicted RBP2.38□□□□□ -2.03
SGIP1-204ENST00000371039 XP32Q5T750 250 aa2.38□□□□□ -2.03
SGIP1-204ENST00000371039 PCLOQ9Y6V0 5065 aa2.37□□□□□ -2.03
SGIP1-204ENST00000371039 LCE2AQ5TA79 106 aaPredicted RBP2.37□□□□□ -2.03
SGIP1-204ENST00000371039 KRTAP12-1P59990 96 aa2.36□□□□□ -2.03
SGIP1-204ENST00000371039 KRTAP9-8Q9BYQ0 159 aa2.36□□□□□ -2.03
SGIP1-204ENST00000371039 PLAC4Q8WY50 150 aa2.35□□□□□ -2.03
SGIP1-204ENST00000371039 HERC2O95714 4834 aa2.35□□□□□ -2.03
SGIP1-204ENST00000371039 LCE2CQ5TA81 110 aa2.33□□□□□ -2.04
SGIP1-204ENST00000371039 A0A0D9SG42 100 aa2.33□□□□□ -2.04
SGIP1-204ENST00000371039 RPL37P61927 97 aaKnown RBP2.32□□□□□ -2.04
SGIP1-204ENST00000371039 S4R3F8 94 aa2.32□□□□□ -2.04
SGIP1-204ENST00000371039 KRTAP4-9Q9BYQ8 210 aa2.32□□□□□ -2.04
SGIP1-204ENST00000371039 LORP23490 312 aaPredicted RBP2.31□□□□□ -2.04
SGIP1-204ENST00000371039 MT1HL1P0DM35 61 aa2.29□□□□□ -2.04
SGIP1-204ENST00000371039 KRTAP19-2Q3LHN2 52 aa2.28□□□□□ -2.04
SGIP1-204ENST00000371039 LCE2BO14633 110 aa2.27□□□□□ -2.05
SGIP1-204ENST00000371039 INE1O15225 51 aa2.27□□□□□ -2.05
SGIP1-204ENST00000371039 FAT4Q6V0I7 4981 aa2.26□□□□□ -2.05
SGIP1-204ENST00000371039 KRTAP4-1Q9BYQ7 146 aa2.24□□□□□ -2.05
SGIP1-204ENST00000371039 HERC1Q15751 4861 aa2.21□□□□□ -2.05
SGIP1-204ENST00000371039 UBR4Q5T4S7 5183 aa2.2□□□□□ -2.06
SGIP1-204ENST00000371039 M0QZ58 72 aa2.15□□□□□ -2.06
SGIP1-204ENST00000371039 LCE1DQ5T752 114 aa2.15□□□□□ -2.07
SGIP1-204ENST00000371039 HMCN2Q8NDA2 5059 aa2.15□□□□□ -2.07
SGIP1-204ENST00000371039 SPRR5A0A1B0GTR4 108 aa2.12□□□□□ -2.07
SGIP1-204ENST00000371039 RNF213Q63HN8 5207 aa2.12□□□□□ -2.07
SGIP1-204ENST00000371039 PP632Q6XCG6 107 aa2.11□□□□□ -2.07
SGIP1-204ENST00000371039 KRTAP4-11Q9BYQ6 195 aa2.08□□□□□ -2.08
SGIP1-204ENST00000371039 KRTAP19-1Q8IUB9 90 aa2.08□□□□□ -2.08
SGIP1-204ENST00000371039 M0R2T5 61 aa2.07□□□□□ -2.08
SGIP1-204ENST00000371039 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.04□□□□□ -2.08
SGIP1-204ENST00000371039 LCE3BQ5TA77 95 aa2.01□□□□□ -2.09
SGIP1-204ENST00000371039 KMT2DO14686 5537 aa2□□□□□ -2.09
SGIP1-204ENST00000371039 CRCT1Q9UGL9 99 aa1.98□□□□□ -2.09
SGIP1-204ENST00000371039 USH2AO75445 5202 aa1.97□□□□□ -2.09
SGIP1-204ENST00000371039 SPRR2GQ9BYE4 73 aa1.96□□□□□ -2.1
SGIP1-204ENST00000371039 LCE3AQ5TA76 89 aa1.95□□□□□ -2.1
SGIP1-204ENST00000371039 KRTAP10-12P60413 245 aa1.92□□□□□ -2.1
SGIP1-204ENST00000371039 MT1FP04733 61 aa1.92□□□□□ -2.1
SGIP1-204ENST00000371039 KRTAP10-5P60370 271 aa1.91□□□□□ -2.1
SGIP1-204ENST00000371039 MT1XP80297 61 aa1.91□□□□□ -2.1
SGIP1-204ENST00000371039 MT1HP80294 61 aa1.9□□□□□ -2.11
SGIP1-204ENST00000371039 MT1BP07438 61 aa1.9□□□□□ -2.11
SGIP1-204ENST00000371039 TNP1P09430 55 aa1.89□□□□□ -2.11
SGIP1-204ENST00000371039 KRTAP8-1Q8IUC2 63 aa1.89□□□□□ -2.11
SGIP1-204ENST00000371039 MT2AP02795 61 aa1.88□□□□□ -2.11
SGIP1-204ENST00000371039 KRTAP10-10P60014 251 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms