RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 RYR1P21817 5038 aa9.22□□□□□ -0.93
CHTOP-203ENST00000368690 KRTAP17-1Q9BYP8 105 aa9.21□□□□□ -0.94
CHTOP-203ENST00000368690 C9orf92A6NGG3 77 aa9.2□□□□□ -0.94
CHTOP-203ENST00000368690 FLG2Q5D862 2391 aaPredicted RBP9.13□□□□□ -0.95
CHTOP-203ENST00000368690 RPL37P61927 97 aaKnown RBP9.11□□□□□ -0.95
CHTOP-203ENST00000368690 LRP1Q07954 4544 aaKnown RBP9.09□□□□□ -0.95
CHTOP-203ENST00000368690 PKHD1L1Q86WI1 4243 aa9.08□□□□□ -0.96
CHTOP-203ENST00000368690 CRIPTQ9P021 101 aa9.08□□□□□ -0.96
CHTOP-203ENST00000368690 P0C880 135 aa9.05□□□□□ -0.96
CHTOP-203ENST00000368690 KRTAP10-6P60371 365 aaPredicted RBP9.05□□□□□ -0.96
CHTOP-203ENST00000368690 MYCBP2O75592 4640 aa9.03□□□□□ -0.96
CHTOP-203ENST00000368690 KRTAP4-5Q9BYR2 181 aa9.02□□□□□ -0.97
CHTOP-203ENST00000368690 KRTAP10-8P60410 259 aa9□□□□□ -0.97
CHTOP-203ENST00000368690 KRTAP3-3Q9BYR6 98 aa8.98□□□□□ -0.97
CHTOP-203ENST00000368690 TNXBP22105 4242 aa8.96□□□□□ -0.97
CHTOP-203ENST00000368690 KRTAP13-4Q3LI77 160 aa8.96□□□□□ -0.98
CHTOP-203ENST00000368690 KRTAP3-2Q9BYR7 98 aa8.95□□□□□ -0.98
CHTOP-203ENST00000368690 TPRXLQ17RH7 258 aa8.95□□□□□ -0.98
CHTOP-203ENST00000368690 DMBT1Q9UGM3 2413 aaPredicted RBP8.94□□□□□ -0.98
CHTOP-203ENST00000368690 FAT3Q8TDW7 4589 aa8.94□□□□□ -0.98
CHTOP-203ENST00000368690 MT1HL1P0DM35 61 aa8.9□□□□□ -0.98
CHTOP-203ENST00000368690 SPINT4Q6UDR6 99 aa8.89□□□□□ -0.99
CHTOP-203ENST00000368690 A0A0D9SG42 100 aa8.88□□□□□ -0.99
CHTOP-203ENST00000368690 BIRC6Q9NR09 4857 aa8.87□□□□□ -0.99
CHTOP-203ENST00000368690 S4R3F8 94 aa8.85□□□□□ -0.99
CHTOP-203ENST00000368690 KRTAP15-1Q3LI76 137 aa8.79□□□□□ -1
CHTOP-203ENST00000368690 ABCA13Q86UQ4 5058 aa8.79□□□□□ -1
CHTOP-203ENST00000368690 J3QL48 77 aa8.78□□□□□ -1
CHTOP-203ENST00000368690 HERC2O95714 4834 aa8.76□□□□□ -1.01
CHTOP-203ENST00000368690 C10orf95Q9H7T3 257 aa8.75□□□□□ -1.01
CHTOP-203ENST00000368690 KRTAP12-2P59991 146 aa8.72□□□□□ -1.01
CHTOP-203ENST00000368690 KRTAP12-1P59990 96 aa8.67□□□□□ -1.02
CHTOP-203ENST00000368690 XP32Q5T750 250 aa8.64□□□□□ -1.03
CHTOP-203ENST00000368690 NDUFAF8A1L188 74 aa8.63□□□□□ -1.03
CHTOP-203ENST00000368690 M0QZ58 72 aa8.61□□□□□ -1.03
CHTOP-203ENST00000368690 PCLOQ9Y6V0 5065 aa8.55□□□□□ -1.04
CHTOP-203ENST00000368690 LPAP08519 4548 aa8.48□□□□□ -1.05
CHTOP-203ENST00000368690 LRP2P98164 4655 aa8.38□□□□□ -1.07
CHTOP-203ENST00000368690 HERC1Q15751 4861 aa8.36□□□□□ -1.07
CHTOP-203ENST00000368690 SEC61BP60468 96 aaKnown RBP8.25□□□□□ -1.09
CHTOP-203ENST00000368690 PLAC4Q8WY50 150 aa8.21□□□□□ -1.1
CHTOP-203ENST00000368690 R4GN34 69 aa8.21□□□□□ -1.1
CHTOP-203ENST00000368690 HMCN2Q8NDA2 5059 aa8.16□□□□□ -1.1
CHTOP-203ENST00000368690 PP632Q6XCG6 107 aa8.08□□□□□ -1.12
CHTOP-203ENST00000368690 KRTAP4-1Q9BYQ7 146 aa8.07□□□□□ -1.12
CHTOP-203ENST00000368690 MUC2Q02817 5179 aa8.04□□□□□ -1.12
CHTOP-203ENST00000368690 MUC17Q685J3 4493 aa7.98□□□□□ -1.13
CHTOP-203ENST00000368690 LORP23490 312 aaPredicted RBP7.96□□□□□ -1.14
CHTOP-203ENST00000368690 LUZP6Q538Z0 58 aa7.94□□□□□ -1.14
CHTOP-203ENST00000368690 UBR4Q5T4S7 5183 aa7.91□□□□□ -1.14
CHTOP-203ENST00000368690 LCE2DQ5TA82 110 aaPredicted RBP7.88□□□□□ -1.15
CHTOP-203ENST00000368690 A0A0A0MQY5 61 aa7.83□□□□□ -1.16
CHTOP-203ENST00000368690 CAMK2N1Q7Z7J9 78 aa7.83□□□□□ -1.16
CHTOP-203ENST00000368690 RNF213Q63HN8 5207 aa7.81□□□□□ -1.16
CHTOP-203ENST00000368690 KRTAP23-1A1A580 65 aa7.78□□□□□ -1.16
CHTOP-203ENST00000368690 KRTAP19-2Q3LHN2 52 aa7.77□□□□□ -1.17
CHTOP-203ENST00000368690 SPRR5A0A1B0GTR4 108 aa7.67□□□□□ -1.18
CHTOP-203ENST00000368690 TNP1P09430 55 aa7.65□□□□□ -1.18
CHTOP-203ENST00000368690 FAT4Q6V0I7 4981 aa7.64□□□□□ -1.19
CHTOP-203ENST00000368690 LCE2CQ5TA81 110 aa7.63□□□□□ -1.19
CHTOP-203ENST00000368690 FLGP20930 4061 aaPredicted RBP7.62□□□□□ -1.19
CHTOP-203ENST00000368690 M0R2T5 61 aa7.58□□□□□ -1.2
CHTOP-203ENST00000368690 MT1HP80294 61 aa7.52□□□□□ -1.21
CHTOP-203ENST00000368690 SPRR2GQ9BYE4 73 aa7.26□□□□□ -1.25
CHTOP-203ENST00000368690 KRTAP10-10P60014 251 aa7.22□□□□□ -1.25
CHTOP-203ENST00000368690 MT2AP02795 61 aa7.21□□□□□ -1.26
CHTOP-203ENST00000368690 KRTAP9-8Q9BYQ0 159 aa7.21□□□□□ -1.26
CHTOP-203ENST00000368690 MT1FP04733 61 aa7.19□□□□□ -1.26
CHTOP-203ENST00000368690 LCE2AQ5TA79 106 aaPredicted RBP7.18□□□□□ -1.26
CHTOP-203ENST00000368690 PRO2289Q9P1D8 64 aa7.16□□□□□ -1.26
CHTOP-203ENST00000368690 LCE3AQ5TA76 89 aa7.13□□□□□ -1.27
CHTOP-203ENST00000368690 KRTAP19-1Q8IUB9 90 aa7.13□□□□□ -1.27
CHTOP-203ENST00000368690 INE1O15225 51 aa7.09□□□□□ -1.27
CHTOP-203ENST00000368690 KRTAP8-1Q8IUC2 63 aa7.05□□□□□ -1.28
CHTOP-203ENST00000368690 KRTAP9-3Q9BYQ3 159 aa6.94□□□□□ -1.3
CHTOP-203ENST00000368690 KRTAP19-8Q3LI54 63 aa6.88□□□□□ -1.31
CHTOP-203ENST00000368690 KRTAP12-3P60328 96 aa6.81□□□□□ -1.32
CHTOP-203ENST00000368690 LCE2BO14633 110 aa6.78□□□□□ -1.32
CHTOP-203ENST00000368690 KRTAP10-5P60370 271 aa6.78□□□□□ -1.32
CHTOP-203ENST00000368690 MT1BP07438 61 aa6.76□□□□□ -1.33
CHTOP-203ENST00000368690 KRTAP10-12P60413 245 aa6.75□□□□□ -1.33
CHTOP-203ENST00000368690 MT1XP80297 61 aa6.75□□□□□ -1.33
CHTOP-203ENST00000368690 USH2AO75445 5202 aa6.67□□□□□ -1.34
CHTOP-203ENST00000368690 FSIP2Q5CZC0 6907 aa6.59□□□□□ -1.36
CHTOP-203ENST00000368690 KRTAP10-7P60409 375 aaPredicted RBP6.55□□□□□ -1.36
CHTOP-203ENST00000368690 LCE3CQ5T5A8 94 aa6.45□□□□□ -1.38
CHTOP-203ENST00000368690 SSPOA2VEC9 5147 aa6.38□□□□□ -1.39
CHTOP-203ENST00000368690 KRTAP19-5Q3LI72 72 aa6.36□□□□□ -1.39
CHTOP-203ENST00000368690 KRTAP9-2Q9BYQ4 174 aa6.34□□□□□ -1.4
CHTOP-203ENST00000368690 KRTAP19-6Q3LI70 58 aa6.31□□□□□ -1.4
CHTOP-203ENST00000368690 KRTAP2-3P0C7H8 128 aa6.22□□□□□ -1.41
CHTOP-203ENST00000368690 KRTAP2-4Q9BYR9 128 aa6.22□□□□□ -1.41
CHTOP-203ENST00000368690 KRTAP2-1Q9BYU5 128 aa6.22□□□□□ -1.41
CHTOP-203ENST00000368690 KRTAP9-6A8MVA2 160 aa6.19□□□□□ -1.42
CHTOP-203ENST00000368690 KRTAP19-4Q3LI73 84 aa6.19□□□□□ -1.42
CHTOP-203ENST00000368690 KMT2DO14686 5537 aa6.17□□□□□ -1.42
CHTOP-203ENST00000368690 FCGBPQ9Y6R7 5405 aaPredicted RBP6.12□□□□□ -1.43
CHTOP-203ENST00000368690 KRTAP4-8A0A0G2JLE6 195 aa6.11□□□□□ -1.43
CHTOP-203ENST00000368690 KRTAP4-8Q9BYQ9 185 aa6.11□□□□□ -1.43
CHTOP-203ENST00000368690 CRCT1Q9UGL9 99 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms