RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 MP68P56378 58 aa10.9□□□□□ -0.66
PFDN2-201ENST00000368010 KRTAP9-7A8MTY7 169 aa10.86□□□□□ -0.67
PFDN2-201ENST00000368010 A8MUN3 132 aa10.83□□□□□ -0.68
PFDN2-201ENST00000368010 KLKP1Q107X0 134 aa10.82□□□□□ -0.68
PFDN2-201ENST00000368010 NDUFC1O43677 76 aa10.8□□□□□ -0.68
PFDN2-201ENST00000368010 SPRR2GQ9BYE4 73 aa10.79□□□□□ -0.68
PFDN2-201ENST00000368010 SCGB1A1P11684 91 aa10.77□□□□□ -0.69
PFDN2-201ENST00000368010 H3BPC8 53 aa10.74□□□□□ -0.69
PFDN2-201ENST00000368010 IMUPQ9GZP8 106 aa10.74□□□□□ -0.69
PFDN2-201ENST00000368010 MACF1Q9UPN3 7388 aaKnown RBP10.73□□□□□ -0.69
PFDN2-201ENST00000368010 Q5VV11 94 aa10.72□□□□□ -0.69
PFDN2-201ENST00000368010 KRTAP19-8Q3LI54 63 aa10.7□□□□□ -0.7
PFDN2-201ENST00000368010 CRIPTQ9P021 101 aa10.69□□□□□ -0.7
PFDN2-201ENST00000368010 MT1BP07438 61 aa10.68□□□□□ -0.7
PFDN2-201ENST00000368010 LOC100996750A0A140TA64 210 aa10.67□□□□□ -0.7
PFDN2-201ENST00000368010 KRTAP4-6Q9BYQ5 205 aa10.67□□□□□ -0.7
PFDN2-201ENST00000368010 H0YAA0 97 aa10.66□□□□□ -0.7
PFDN2-201ENST00000368010 K7ERU9 68 aa10.64□□□□□ -0.71
PFDN2-201ENST00000368010 SYNE2Q8WXH0 6885 aaKnown RBP10.63□□□□□ -0.71
PFDN2-201ENST00000368010 MT-ATP8P03928 68 aa10.59□□□□□ -0.71
PFDN2-201ENST00000368010 A6NN06 94 aa10.55□□□□□ -0.72
PFDN2-201ENST00000368010 ADM2Q7Z4H4 148 aa10.55□□□□□ -0.72
PFDN2-201ENST00000368010 DMAC1Q96GE9 116 aa10.55□□□□□ -0.72
PFDN2-201ENST00000368010 SMIM20Q8N5G0 67 aa10.5□□□□□ -0.73
PFDN2-201ENST00000368010 TRAV7A0A075B6U4 112 aa10.47□□□□□ -0.73
PFDN2-201ENST00000368010 KRTAP10-5P60370 271 aa10.42□□□□□ -0.74
PFDN2-201ENST00000368010 KRTAP6-3Q3LI67 103 aa10.36□□□□□ -0.75
PFDN2-201ENST00000368010 C20orf197Q8N268 126 aa10.35□□□□□ -0.75
PFDN2-201ENST00000368010 ACYP2P14621 99 aa10.32□□□□□ -0.76
PFDN2-201ENST00000368010 P0C880 135 aa10.3□□□□□ -0.76
PFDN2-201ENST00000368010 R4GN34 69 aa10.28□□□□□ -0.76
PFDN2-201ENST00000368010 SNURFQ9Y675 71 aa10.24□□□□□ -0.77
PFDN2-201ENST00000368010 M0QZ58 72 aa10.21□□□□□ -0.77
PFDN2-201ENST00000368010 SPTSSBQ8NFR3 76 aa10.2□□□□□ -0.78
PFDN2-201ENST00000368010 PLAC4Q8WY50 150 aa10.17□□□□□ -0.78
PFDN2-201ENST00000368010 CHKB-CPT1BH3BT56 60 aa10.16□□□□□ -0.78
PFDN2-201ENST00000368010 SERP2Q8N6R1 65 aa10.15□□□□□ -0.78
PFDN2-201ENST00000368010 PRO2289Q9P1D8 64 aa10.12□□□□□ -0.79
PFDN2-201ENST00000368010 SPANXA2-OT1Q8N9U9 137 aa10.11□□□□□ -0.79
PFDN2-201ENST00000368010 LINC01554Q52M75 96 aa10.06□□□□□ -0.8
PFDN2-201ENST00000368010 MT1XP80297 61 aa10.04□□□□□ -0.8
PFDN2-201ENST00000368010 NEBP20929 6669 aa10□□□□□ -0.81
PFDN2-201ENST00000368010 MUC12Q9UKN1 5478 aa9.92□□□□□ -0.82
PFDN2-201ENST00000368010 KRTAP5-9P26371 169 aa9.92□□□□□ -0.82
PFDN2-201ENST00000368010 COX7CP15954 63 aa9.87□□□□□ -0.83
PFDN2-201ENST00000368010 COA5Q86WW8 74 aa9.81□□□□□ -0.84
PFDN2-201ENST00000368010 KRTAP12-2P59991 146 aa9.8□□□□□ -0.84
PFDN2-201ENST00000368010 KMT2DO14686 5537 aa9.79□□□□□ -0.84
PFDN2-201ENST00000368010 KRTAP4-8Q9BYQ9 185 aa9.75□□□□□ -0.85
PFDN2-201ENST00000368010 H7BZZ5 65 aa9.69□□□□□ -0.86
PFDN2-201ENST00000368010 KRTAP8-1Q8IUC2 63 aa9.69□□□□□ -0.86
PFDN2-201ENST00000368010 SPRR2FQ96RM1 72 aa9.68□□□□□ -0.86
PFDN2-201ENST00000368010 KRTAP13-4Q3LI77 160 aa9.67□□□□□ -0.86
PFDN2-201ENST00000368010 MDN1Q9NU22 5596 aa9.66□□□□□ -0.86
PFDN2-201ENST00000368010 CYSTM1Q9H1C7 97 aa9.66□□□□□ -0.86
PFDN2-201ENST00000368010 SEC61GP60059 68 aa9.63□□□□□ -0.87
PFDN2-201ENST00000368010 SERP1Q9Y6X1 66 aa9.6□□□□□ -0.87
PFDN2-201ENST00000368010 KRTAP10-7P60409 375 aaPredicted RBP9.59□□□□□ -0.87
PFDN2-201ENST00000368010 ANAPC13Q9BS18 74 aa9.58□□□□□ -0.88
PFDN2-201ENST00000368010 KRTAP4-8A0A0G2JLE6 195 aa9.57□□□□□ -0.88
PFDN2-201ENST00000368010 KRTAP10-12P60413 245 aa9.55□□□□□ -0.88
PFDN2-201ENST00000368010 KRTAP20-1Q3LI63 56 aa9.54□□□□□ -0.88
PFDN2-201ENST00000368010 SPRR2EP22531 72 aa9.51□□□□□ -0.89
PFDN2-201ENST00000368010 SPRR2BP35325 72 aa9.51□□□□□ -0.89
PFDN2-201ENST00000368010 SPRR2AP35326 72 aa9.51□□□□□ -0.89
PFDN2-201ENST00000368010 CAMK2N1Q7Z7J9 78 aa9.49□□□□□ -0.89
PFDN2-201ENST00000368010 A0A1B0GU33 70 aa9.43□□□□□ -0.9
PFDN2-201ENST00000368010 A0A0D9SG42 100 aa9.41□□□□□ -0.9
PFDN2-201ENST00000368010 SPATA8Q6RVD6 105 aa9.4□□□□□ -0.9
PFDN2-201ENST00000368010 LCE1AQ5T7P2 110 aa9.39□□□□□ -0.91
PFDN2-201ENST00000368010 CCDC179H3BU77 68 aa9.37□□□□□ -0.91
PFDN2-201ENST00000368010 A0A1B0GU69 56 aa9.33□□□□□ -0.92
PFDN2-201ENST00000368010 KRTAP2-3P0C7H8 128 aa9.32□□□□□ -0.92
PFDN2-201ENST00000368010 KRTAP2-4Q9BYR9 128 aa9.32□□□□□ -0.92
PFDN2-201ENST00000368010 SPINT4Q6UDR6 99 aa9.28□□□□□ -0.92
PFDN2-201ENST00000368010 KRTAP4-12Q9BQ66 201 aa9.28□□□□□ -0.92
PFDN2-201ENST00000368010 LCE3BQ5TA77 95 aa9.27□□□□□ -0.93
PFDN2-201ENST00000368010 ATP5EP56381 51 aaPredicted RBP9.26□□□□□ -0.93
PFDN2-201ENST00000368010 KRTAP12-1P59990 96 aa9.21□□□□□ -0.94
PFDN2-201ENST00000368010 SPRR2DP22532 72 aa9.19□□□□□ -0.94
PFDN2-201ENST00000368010 SMIM26A0A096LP01 95 aa9.18□□□□□ -0.94
PFDN2-201ENST00000368010 KRTAP9-9Q9BYP9 154 aa9.11□□□□□ -0.95
PFDN2-201ENST00000368010 KRTAP9-4Q9BYQ2 154 aa9.11□□□□□ -0.95
PFDN2-201ENST00000368010 PRR15LQ9BU68 103 aa9.09□□□□□ -0.95
PFDN2-201ENST00000368010 A8MU10 97 aa9.08□□□□□ -0.96
PFDN2-201ENST00000368010 TMEM258P61165 79 aa9.05□□□□□ -0.96
PFDN2-201ENST00000368010 KRTAP2-2Q9BYT5 123 aa9.04□□□□□ -0.96
PFDN2-201ENST00000368010 KRTAP2-1Q9BYU5 128 aa9.04□□□□□ -0.96
PFDN2-201ENST00000368010 LINC01558Q9Y6Z2 57 aa9□□□□□ -0.97
PFDN2-201ENST00000368010 KRTAP19-7Q3SYF9 63 aa8.98□□□□□ -0.97
PFDN2-201ENST00000368010 MT1EP04732 61 aa8.9□□□□□ -0.98
PFDN2-201ENST00000368010 KRTAP19-3Q7Z4W3 81 aa8.81□□□□□ -1
PFDN2-201ENST00000368010 LCE5AQ5TCM9 118 aa8.8□□□□□ -1
PFDN2-201ENST00000368010 KRTAP19-5Q3LI72 72 aa8.79□□□□□ -1
PFDN2-201ENST00000368010 C10orf95Q9H7T3 257 aa8.79□□□□□ -1
PFDN2-201ENST00000368010 UQCR11O14957 56 aa8.78□□□□□ -1
PFDN2-201ENST00000368010 TNP1P09430 55 aa8.78□□□□□ -1
PFDN2-201ENST00000368010 KRTAP4-7Q9BYR0 210 aa8.67□□□□□ -1.02
PFDN2-201ENST00000368010 LCE1DQ5T752 114 aa8.66□□□□□ -1.02
PFDN2-201ENST00000368010 LCE3AQ5TA76 89 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms