RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 KRTAP10-8P60410 259 aa10.2□□□□□ -0.78
CMTM3-201ENST00000361909 KRTAP3-1Q9BYR8 98 aa10.19□□□□□ -0.78
CMTM3-201ENST00000361909 KIAA1109Q2LD37 5005 aa10.18□□□□□ -0.78
CMTM3-201ENST00000361909 COX6B2Q6YFQ2 88 aa10.12□□□□□ -0.79
CMTM3-201ENST00000361909 FLG2Q5D862 2391 aaPredicted RBP10.04□□□□□ -0.8
CMTM3-201ENST00000361909 LRP1Q07954 4544 aaKnown RBP10.03□□□□□ -0.8
CMTM3-201ENST00000361909 TNXBP22105 4242 aa10.03□□□□□ -0.8
CMTM3-201ENST00000361909 MT1HL1P0DM35 61 aa10.02□□□□□ -0.81
CMTM3-201ENST00000361909 RPL37P61927 97 aaKnown RBP10.01□□□□□ -0.81
CMTM3-201ENST00000361909 FAT3Q8TDW7 4589 aa9.99□□□□□ -0.81
CMTM3-201ENST00000361909 P0C880 135 aa9.99□□□□□ -0.81
CMTM3-201ENST00000361909 C9orf92A6NGG3 77 aa9.98□□□□□ -0.81
CMTM3-201ENST00000361909 KRTAP4-5Q9BYR2 181 aa9.97□□□□□ -0.81
CMTM3-201ENST00000361909 CRIPTQ9P021 101 aa9.95□□□□□ -0.82
CMTM3-201ENST00000361909 DMBT1Q9UGM3 2413 aaPredicted RBP9.89□□□□□ -0.83
CMTM3-201ENST00000361909 MYCBP2O75592 4640 aa9.88□□□□□ -0.83
CMTM3-201ENST00000361909 KRTAP10-6P60371 365 aaPredicted RBP9.85□□□□□ -0.83
CMTM3-201ENST00000361909 BIRC6Q9NR09 4857 aa9.85□□□□□ -0.83
CMTM3-201ENST00000361909 SPINT4Q6UDR6 99 aa9.84□□□□□ -0.83
CMTM3-201ENST00000361909 TPRXLQ17RH7 258 aa9.8□□□□□ -0.84
CMTM3-201ENST00000361909 KRTAP13-4Q3LI77 160 aa9.76□□□□□ -0.85
CMTM3-201ENST00000361909 HERC2O95714 4834 aa9.75□□□□□ -0.85
CMTM3-201ENST00000361909 KRTAP3-3Q9BYR6 98 aa9.75□□□□□ -0.85
CMTM3-201ENST00000361909 KRTAP3-2Q9BYR7 98 aa9.74□□□□□ -0.85
CMTM3-201ENST00000361909 A0A0D9SG42 100 aa9.71□□□□□ -0.86
CMTM3-201ENST00000361909 J3QL48 77 aa9.7□□□□□ -0.86
CMTM3-201ENST00000361909 KRTAP15-1Q3LI76 137 aa9.7□□□□□ -0.86
CMTM3-201ENST00000361909 S4R3F8 94 aa9.66□□□□□ -0.86
CMTM3-201ENST00000361909 ABCA13Q86UQ4 5058 aa9.66□□□□□ -0.86
CMTM3-201ENST00000361909 XP32Q5T750 250 aa9.63□□□□□ -0.87
CMTM3-201ENST00000361909 C10orf95Q9H7T3 257 aa9.59□□□□□ -0.87
CMTM3-201ENST00000361909 NDUFAF8A1L188 74 aa9.56□□□□□ -0.88
CMTM3-201ENST00000361909 KRTAP12-2P59991 146 aa9.51□□□□□ -0.89
CMTM3-201ENST00000361909 KRTAP12-1P59990 96 aa9.47□□□□□ -0.89
CMTM3-201ENST00000361909 M0QZ58 72 aa9.43□□□□□ -0.9
CMTM3-201ENST00000361909 PCLOQ9Y6V0 5065 aa9.32□□□□□ -0.92
CMTM3-201ENST00000361909 LPAP08519 4548 aa9.31□□□□□ -0.92
CMTM3-201ENST00000361909 SEC61BP60468 96 aaKnown RBP9.3□□□□□ -0.92
CMTM3-201ENST00000361909 LRP2P98164 4655 aa9.3□□□□□ -0.92
CMTM3-201ENST00000361909 HERC1Q15751 4861 aa9.11□□□□□ -0.95
CMTM3-201ENST00000361909 PLAC4Q8WY50 150 aa9.04□□□□□ -0.96
CMTM3-201ENST00000361909 KRTAP4-1Q9BYQ7 146 aa9.04□□□□□ -0.96
CMTM3-201ENST00000361909 HMCN2Q8NDA2 5059 aa9.04□□□□□ -0.96
CMTM3-201ENST00000361909 MUC17Q685J3 4493 aa9.03□□□□□ -0.96
CMTM3-201ENST00000361909 R4GN34 69 aa8.97□□□□□ -0.97
CMTM3-201ENST00000361909 PP632Q6XCG6 107 aa8.92□□□□□ -0.98
CMTM3-201ENST00000361909 LUZP6Q538Z0 58 aa8.88□□□□□ -0.99
CMTM3-201ENST00000361909 KRTAP19-2Q3LHN2 52 aa8.85□□□□□ -0.99
CMTM3-201ENST00000361909 A0A0A0MQY5 61 aa8.8□□□□□ -1
CMTM3-201ENST00000361909 MUC2Q02817 5179 aa8.71□□□□□ -1.02
CMTM3-201ENST00000361909 LCE2CQ5TA81 110 aa8.61□□□□□ -1.03
CMTM3-201ENST00000361909 LORP23490 312 aaPredicted RBP8.59□□□□□ -1.03
CMTM3-201ENST00000361909 UBR4Q5T4S7 5183 aa8.58□□□□□ -1.04
CMTM3-201ENST00000361909 FLGP20930 4061 aaPredicted RBP8.57□□□□□ -1.04
CMTM3-201ENST00000361909 CAMK2N1Q7Z7J9 78 aa8.57□□□□□ -1.04
CMTM3-201ENST00000361909 KRTAP23-1A1A580 65 aa8.55□□□□□ -1.04
CMTM3-201ENST00000361909 RNF213Q63HN8 5207 aa8.53□□□□□ -1.04
CMTM3-201ENST00000361909 SPRR5A0A1B0GTR4 108 aa8.44□□□□□ -1.06
CMTM3-201ENST00000361909 MT1HP80294 61 aa8.42□□□□□ -1.06
CMTM3-201ENST00000361909 TNP1P09430 55 aa8.38□□□□□ -1.07
CMTM3-201ENST00000361909 M0R2T5 61 aa8.34□□□□□ -1.07
CMTM3-201ENST00000361909 FAT4Q6V0I7 4981 aa8.32□□□□□ -1.08
CMTM3-201ENST00000361909 KRTAP9-8Q9BYQ0 159 aa8.14□□□□□ -1.11
CMTM3-201ENST00000361909 MT2AP02795 61 aa8.1□□□□□ -1.11
CMTM3-201ENST00000361909 LCE2AQ5TA79 106 aaPredicted RBP8.07□□□□□ -1.12
CMTM3-201ENST00000361909 MT1FP04733 61 aa8.05□□□□□ -1.12
CMTM3-201ENST00000361909 KRTAP10-10P60014 251 aa8.04□□□□□ -1.12
CMTM3-201ENST00000361909 SPRR2GQ9BYE4 73 aa8.01□□□□□ -1.13
CMTM3-201ENST00000361909 PRO2289Q9P1D8 64 aa7.99□□□□□ -1.13
CMTM3-201ENST00000361909 KRTAP19-1Q8IUB9 90 aa7.95□□□□□ -1.14
CMTM3-201ENST00000361909 INE1O15225 51 aa7.91□□□□□ -1.14
CMTM3-201ENST00000361909 KRTAP9-3Q9BYQ3 159 aa7.84□□□□□ -1.15
CMTM3-201ENST00000361909 KRTAP19-8Q3LI54 63 aa7.79□□□□□ -1.16
CMTM3-201ENST00000361909 LCE3AQ5TA76 89 aa7.77□□□□□ -1.17
CMTM3-201ENST00000361909 KRTAP8-1Q8IUC2 63 aa7.7□□□□□ -1.18
CMTM3-201ENST00000361909 MT1BP07438 61 aa7.64□□□□□ -1.19
CMTM3-201ENST00000361909 LCE2BO14633 110 aa7.59□□□□□ -1.2
CMTM3-201ENST00000361909 KRTAP12-3P60328 96 aa7.43□□□□□ -1.22
CMTM3-201ENST00000361909 MT1XP80297 61 aa7.42□□□□□ -1.22
CMTM3-201ENST00000361909 KRTAP10-5P60370 271 aa7.41□□□□□ -1.22
CMTM3-201ENST00000361909 KRTAP10-12P60413 245 aa7.36□□□□□ -1.23
CMTM3-201ENST00000361909 LCE2DQ5TA82 110 aaPredicted RBP7.33□□□□□ -1.24
CMTM3-201ENST00000361909 USH2AO75445 5202 aa7.26□□□□□ -1.25
CMTM3-201ENST00000361909 KRTAP19-6Q3LI70 58 aa7.15□□□□□ -1.26
CMTM3-201ENST00000361909 KRTAP10-7P60409 375 aaPredicted RBP7.1□□□□□ -1.27
CMTM3-201ENST00000361909 SSPOA2VEC9 5147 aa7.05□□□□□ -1.28
CMTM3-201ENST00000361909 LCE3CQ5T5A8 94 aa7.03□□□□□ -1.28
CMTM3-201ENST00000361909 KRTAP9-2Q9BYQ4 174 aa6.96□□□□□ -1.3
CMTM3-201ENST00000361909 FSIP2Q5CZC0 6907 aa6.93□□□□□ -1.3
CMTM3-201ENST00000361909 KRTAP19-5Q3LI72 72 aa6.89□□□□□ -1.31
CMTM3-201ENST00000361909 KRTAP2-3P0C7H8 128 aa6.8□□□□□ -1.32
CMTM3-201ENST00000361909 KRTAP2-4Q9BYR9 128 aa6.8□□□□□ -1.32
CMTM3-201ENST00000361909 KRTAP2-1Q9BYU5 128 aa6.8□□□□□ -1.32
CMTM3-201ENST00000361909 KRTAP4-8A0A0G2JLE6 195 aa6.79□□□□□ -1.32
CMTM3-201ENST00000361909 KRTAP4-8Q9BYQ9 185 aa6.79□□□□□ -1.32
CMTM3-201ENST00000361909 KRTAP19-4Q3LI73 84 aa6.79□□□□□ -1.32
CMTM3-201ENST00000361909 CRCT1Q9UGL9 99 aa6.74□□□□□ -1.33
CMTM3-201ENST00000361909 FCGBPQ9Y6R7 5405 aaPredicted RBP6.73□□□□□ -1.33
CMTM3-201ENST00000361909 KRTAP9-6A8MVA2 160 aa6.7□□□□□ -1.34
CMTM3-201ENST00000361909 KMT2DO14686 5537 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms