RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 RBM12B-AS1Q9P1G2 102 aa10.65□□□□□ -0.71
MAP1LC3A-201ENST00000360668 SPTSSBQ8NFR3 76 aa10.61□□□□□ -0.71
MAP1LC3A-201ENST00000360668 PSPHP1O15172 72 aa10.6□□□□□ -0.71
MAP1LC3A-201ENST00000360668 PRR15LQ9BU68 103 aa10.57□□□□□ -0.72
MAP1LC3A-201ENST00000360668 Q5VV11 94 aa10.55□□□□□ -0.72
MAP1LC3A-201ENST00000360668 H1FX-AS1Q4G0G2 97 aa10.52□□□□□ -0.72
MAP1LC3A-201ENST00000360668 S4R3F8 94 aa10.43□□□□□ -0.74
MAP1LC3A-201ENST00000360668 A0A1B0GU69 56 aa10.43□□□□□ -0.74
MAP1LC3A-201ENST00000360668 KRTAP19-2Q3LHN2 52 aa10.39□□□□□ -0.75
MAP1LC3A-201ENST00000360668 LCA10Q71F78 164 aa10.39□□□□□ -0.75
MAP1LC3A-201ENST00000360668 SEC61GP60059 68 aa10.35□□□□□ -0.75
MAP1LC3A-201ENST00000360668 KRTAP3-3Q9BYR6 98 aa10.35□□□□□ -0.75
MAP1LC3A-201ENST00000360668 FAT4Q6V0I7 4981 aa10.35□□□□□ -0.75
MAP1LC3A-201ENST00000360668 BRK1Q8WUW1 75 aa10.33□□□□□ -0.76
MAP1LC3A-201ENST00000360668 A6NED7 52 aa10.31□□□□□ -0.76
MAP1LC3A-201ENST00000360668 PRO0628Q9UI54 55 aa10.29□□□□□ -0.76
MAP1LC3A-201ENST00000360668 LCE2AQ5TA79 106 aaPredicted RBP10.26□□□□□ -0.77
MAP1LC3A-201ENST00000360668 FLGP20930 4061 aaPredicted RBP10.22□□□□□ -0.77
MAP1LC3A-201ENST00000360668 CSAG1Q6PB30 78 aa10.21□□□□□ -0.78
MAP1LC3A-201ENST00000360668 CDC42SE1Q9NRR8 79 aa10.21□□□□□ -0.78
MAP1LC3A-201ENST00000360668 UQCR11O14957 56 aa10.19□□□□□ -0.78
MAP1LC3A-201ENST00000360668 LCE2CQ5TA81 110 aa10.16□□□□□ -0.78
MAP1LC3A-201ENST00000360668 SPATA8Q6RVD6 105 aa10.13□□□□□ -0.79
MAP1LC3A-201ENST00000360668 A0A1B0GU33 70 aa10.07□□□□□ -0.8
MAP1LC3A-201ENST00000360668 MIR22HGQ0VDD5 57 aa10.07□□□□□ -0.8
MAP1LC3A-201ENST00000360668 A8MU10 97 aa10.02□□□□□ -0.81
MAP1LC3A-201ENST00000360668 H0YAA0 97 aa10.01□□□□□ -0.81
MAP1LC3A-201ENST00000360668 KRTAP10-6P60371 365 aaPredicted RBP10.01□□□□□ -0.81
MAP1LC3A-201ENST00000360668 KRTAP3-2Q9BYR7 98 aa10.01□□□□□ -0.81
MAP1LC3A-201ENST00000360668 MT1HP80294 61 aa9.96□□□□□ -0.82
MAP1LC3A-201ENST00000360668 ADM2Q7Z4H4 148 aa9.96□□□□□ -0.82
MAP1LC3A-201ENST00000360668 SVIPQ8NHG7 77 aa9.95□□□□□ -0.82
MAP1LC3A-201ENST00000360668 KRTAP9-2Q9BYQ4 174 aa9.91□□□□□ -0.82
MAP1LC3A-201ENST00000360668 P0C880 135 aa9.88□□□□□ -0.83
MAP1LC3A-201ENST00000360668 M0R2T5 61 aa9.85□□□□□ -0.83
MAP1LC3A-201ENST00000360668 PMAIP1Q13794 54 aa9.82□□□□□ -0.84
MAP1LC3A-201ENST00000360668 A6NN06 94 aa9.74□□□□□ -0.85
MAP1LC3A-201ENST00000360668 M0QZ58 72 aa9.74□□□□□ -0.85
MAP1LC3A-201ENST00000360668 KRTAP13-4Q3LI77 160 aa9.7□□□□□ -0.86
MAP1LC3A-201ENST00000360668 LORP23490 312 aaPredicted RBP9.69□□□□□ -0.86
MAP1LC3A-201ENST00000360668 LCE2DQ5TA82 110 aaPredicted RBP9.68□□□□□ -0.86
MAP1LC3A-201ENST00000360668 K7ERS5 55 aa9.62□□□□□ -0.87
MAP1LC3A-201ENST00000360668 R4GN34 69 aa9.61□□□□□ -0.87
MAP1LC3A-201ENST00000360668 KRTAP9-8Q9BYQ0 159 aa9.59□□□□□ -0.87
MAP1LC3A-201ENST00000360668 CRIPTQ9P021 101 aa9.59□□□□□ -0.87
MAP1LC3A-201ENST00000360668 MT2AP02795 61 aa9.56□□□□□ -0.88
MAP1LC3A-201ENST00000360668 KRTAP9-6A0A140TA67 174 aa9.53□□□□□ -0.88
MAP1LC3A-201ENST00000360668 A0A0D9SG42 100 aa9.52□□□□□ -0.89
MAP1LC3A-201ENST00000360668 MT1FP04733 61 aa9.5□□□□□ -0.89
MAP1LC3A-201ENST00000360668 FSIP2Q5CZC0 6907 aa9.49□□□□□ -0.89
MAP1LC3A-201ENST00000360668 KRTAP10-10P60014 251 aa9.48□□□□□ -0.89
MAP1LC3A-201ENST00000360668 KTN1-AS1Q86SY8 53 aa9.48□□□□□ -0.89
MAP1LC3A-201ENST00000360668 KRTAP12-1P59990 96 aa9.4□□□□□ -0.9
MAP1LC3A-201ENST00000360668 LINC01554Q52M75 96 aa9.4□□□□□ -0.9
MAP1LC3A-201ENST00000360668 CRCT1Q9UGL9 99 aa9.38□□□□□ -0.91
MAP1LC3A-201ENST00000360668 SPRR2GQ9BYE4 73 aa9.37□□□□□ -0.91
MAP1LC3A-201ENST00000360668 KRTAP12-2P59991 146 aa9.34□□□□□ -0.91
MAP1LC3A-201ENST00000360668 KRTAP19-1Q8IUB9 90 aa9.33□□□□□ -0.92
MAP1LC3A-201ENST00000360668 SPINT4Q6UDR6 99 aa9.32□□□□□ -0.92
MAP1LC3A-201ENST00000360668 KRTAP9-3Q9BYQ3 159 aa9.25□□□□□ -0.93
MAP1LC3A-201ENST00000360668 ROMO1P60602 79 aa9.24□□□□□ -0.93
MAP1LC3A-201ENST00000360668 KRTAP19-8Q3LI54 63 aa9.14□□□□□ -0.95
MAP1LC3A-201ENST00000360668 USH2AO75445 5202 aa9.11□□□□□ -0.95
MAP1LC3A-201ENST00000360668 PRAC1Q96KF2 57 aa9.08□□□□□ -0.96
MAP1LC3A-201ENST00000360668 PLAC4Q8WY50 150 aa9.05□□□□□ -0.96
MAP1LC3A-201ENST00000360668 LCE2BO14633 110 aa9.03□□□□□ -0.96
MAP1LC3A-201ENST00000360668 SSPOA2VEC9 5147 aa9□□□□□ -0.97
MAP1LC3A-201ENST00000360668 MT1BP07438 61 aa8.99□□□□□ -0.97
MAP1LC3A-201ENST00000360668 CAMK2N1Q7Z7J9 78 aa8.99□□□□□ -0.97
MAP1LC3A-201ENST00000360668 KRTAP25-1Q3LHN0 102 aa8.93□□□□□ -0.98
MAP1LC3A-201ENST00000360668 C10orf95Q9H7T3 257 aa8.88□□□□□ -0.99
MAP1LC3A-201ENST00000360668 FCGBPQ9Y6R7 5405 aaPredicted RBP8.79□□□□□ -1
MAP1LC3A-201ENST00000360668 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.73□□□□□ -1.01
MAP1LC3A-201ENST00000360668 MT1XP80297 61 aa8.69□□□□□ -1.02
MAP1LC3A-201ENST00000360668 KRTAP19-6Q3LI70 58 aa8.69□□□□□ -1.02
MAP1LC3A-201ENST00000360668 KRTAP10-5P60370 271 aa8.68□□□□□ -1.02
MAP1LC3A-201ENST00000360668 PRO2289Q9P1D8 64 aa8.64□□□□□ -1.03
MAP1LC3A-201ENST00000360668 TNP1P09430 55 aa8.61□□□□□ -1.03
MAP1LC3A-201ENST00000360668 KRTAP9-7A8MTY7 169 aa8.58□□□□□ -1.04
MAP1LC3A-201ENST00000360668 PP632Q6XCG6 107 aa8.54□□□□□ -1.04
MAP1LC3A-201ENST00000360668 KRTAP23-1A1A580 65 aa8.53□□□□□ -1.04
MAP1LC3A-201ENST00000360668 MACF1Q9UPN3 7388 aaKnown RBP8.48□□□□□ -1.05
MAP1LC3A-201ENST00000360668 SYNE2Q8WXH0 6885 aaKnown RBP8.38□□□□□ -1.07
MAP1LC3A-201ENST00000360668 KRTAP10-7P60409 375 aaPredicted RBP8.33□□□□□ -1.08
MAP1LC3A-201ENST00000360668 KRTAP10-12P60413 245 aa8.26□□□□□ -1.09
MAP1LC3A-201ENST00000360668 KRTAP6-3Q3LI67 103 aa8.19□□□□□ -1.1
MAP1LC3A-201ENST00000360668 LCE3AQ5TA76 89 aa8.19□□□□□ -1.1
MAP1LC3A-201ENST00000360668 KRTAP8-1Q8IUC2 63 aa8.06□□□□□ -1.12
MAP1LC3A-201ENST00000360668 KMT2DO14686 5537 aa8.01□□□□□ -1.13
MAP1LC3A-201ENST00000360668 KRTAP4-8A0A0G2JLE6 195 aa8□□□□□ -1.13
MAP1LC3A-201ENST00000360668 KRTAP4-8Q9BYQ9 185 aa8□□□□□ -1.13
MAP1LC3A-201ENST00000360668 KRTAP15-1Q3LI76 137 aa7.95□□□□□ -1.14
MAP1LC3A-201ENST00000360668 KRTAP12-3P60328 96 aa7.88□□□□□ -1.15
MAP1LC3A-201ENST00000360668 MUC12Q9UKN1 5478 aa7.87□□□□□ -1.15
MAP1LC3A-201ENST00000360668 KRTAP5-9P26371 169 aa7.87□□□□□ -1.15
MAP1LC3A-201ENST00000360668 KRTAP19-5Q3LI72 72 aa7.84□□□□□ -1.15
MAP1LC3A-201ENST00000360668 NEBP20929 6669 aa7.83□□□□□ -1.16
MAP1LC3A-201ENST00000360668 KRTAP19-7Q3SYF9 63 aa7.76□□□□□ -1.17
MAP1LC3A-201ENST00000360668 MDN1Q9NU22 5596 aa7.72□□□□□ -1.17
MAP1LC3A-201ENST00000360668 MT1EP04732 61 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms