RNA–Protein interactions for RNA: ENST00000357798.9

NPAS3-203, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-203ENST00000357798 KRTAP3-2Q9BYR7 98 aa12.17□□□□□ -0.46
NPAS3-203ENST00000357798 FAT1Q14517 4588 aa12.13□□□□□ -0.47
NPAS3-203ENST00000357798 A0A1B0GVY2 172 aa12.13□□□□□ -0.47
NPAS3-203ENST00000357798 A0A0D9SG42 100 aa12.11□□□□□ -0.47
NPAS3-203ENST00000357798 S4R3F8 94 aa12.09□□□□□ -0.47
NPAS3-203ENST00000357798 P0C880 135 aa12.08□□□□□ -0.48
NPAS3-203ENST00000357798 TPRXLQ17RH7 258 aa12.06□□□□□ -0.48
NPAS3-203ENST00000357798 RYR3Q15413 4870 aa12.04□□□□□ -0.48
NPAS3-203ENST00000357798 FAT3Q8TDW7 4589 aa12.01□□□□□ -0.49
NPAS3-203ENST00000357798 KRTAP10-8P60410 259 aa11.97□□□□□ -0.49
NPAS3-203ENST00000357798 DMBT1Q9UGM3 2413 aaPredicted RBP11.94□□□□□ -0.5
NPAS3-203ENST00000357798 SPINT4Q6UDR6 99 aa11.93□□□□□ -0.5
NPAS3-203ENST00000357798 XP32Q5T750 250 aa11.91□□□□□ -0.5
NPAS3-203ENST00000357798 TNXBP22105 4242 aa11.91□□□□□ -0.5
NPAS3-203ENST00000357798 LRP1Q07954 4544 aaKnown RBP11.89□□□□□ -0.51
NPAS3-203ENST00000357798 C10orf95Q9H7T3 257 aa11.87□□□□□ -0.51
NPAS3-203ENST00000357798 KRTAP12-2P59991 146 aa11.84□□□□□ -0.51
NPAS3-203ENST00000357798 HSPG2P98160 4391 aa11.82□□□□□ -0.52
NPAS3-203ENST00000357798 RYR2Q92736 4967 aa11.79□□□□□ -0.52
NPAS3-203ENST00000357798 KRTAP12-1P59990 96 aa11.76□□□□□ -0.53
NPAS3-203ENST00000357798 KRTAP15-1Q3LI76 137 aa11.73□□□□□ -0.53
NPAS3-203ENST00000357798 EPPK1P58107 5090 aaKnown RBP11.65□□□□□ -0.54
NPAS3-203ENST00000357798 M0QZ58 72 aa11.64□□□□□ -0.55
NPAS3-203ENST00000357798 Q5VSD8 79 aa11.61□□□□□ -0.55
NPAS3-203ENST00000357798 NDUFAF8A1L188 74 aa11.53□□□□□ -0.56
NPAS3-203ENST00000357798 MYCBP2O75592 4640 aa11.47□□□□□ -0.57
NPAS3-203ENST00000357798 A0A0A0MQY5 61 aa11.39□□□□□ -0.59
NPAS3-203ENST00000357798 MT1HL1P0DM35 61 aa11.39□□□□□ -0.59
NPAS3-203ENST00000357798 KIAA1109Q2LD37 5005 aa11.28□□□□□ -0.6
NPAS3-203ENST00000357798 KRTAP17-1Q9BYP8 105 aa11.24□□□□□ -0.61
NPAS3-203ENST00000357798 RYR1P21817 5038 aa11.24□□□□□ -0.61
NPAS3-203ENST00000357798 LPAP08519 4548 aa11.22□□□□□ -0.61
NPAS3-203ENST00000357798 R4GN34 69 aa11.21□□□□□ -0.62
NPAS3-203ENST00000357798 LRP2P98164 4655 aa11.15□□□□□ -0.62
NPAS3-203ENST00000357798 PLAC4Q8WY50 150 aa11.01□□□□□ -0.65
NPAS3-203ENST00000357798 LORP23490 312 aaPredicted RBP10.96□□□□□ -0.65
NPAS3-203ENST00000357798 BIRC6Q9NR09 4857 aa10.96□□□□□ -0.65
NPAS3-203ENST00000357798 SEC61BP60468 96 aaKnown RBP10.88□□□□□ -0.67
NPAS3-203ENST00000357798 ABCA13Q86UQ4 5058 aa10.87□□□□□ -0.67
NPAS3-203ENST00000357798 PCLOQ9Y6V0 5065 aa10.86□□□□□ -0.67
NPAS3-203ENST00000357798 PP632Q6XCG6 107 aa10.84□□□□□ -0.67
NPAS3-203ENST00000357798 MUC17Q685J3 4493 aa10.8□□□□□ -0.68
NPAS3-203ENST00000357798 KRTAP4-5Q9BYR2 181 aa10.71□□□□□ -0.69
NPAS3-203ENST00000357798 HERC2O95714 4834 aa10.71□□□□□ -0.7
NPAS3-203ENST00000357798 KRTAP4-1Q9BYQ7 146 aa10.7□□□□□ -0.7
NPAS3-203ENST00000357798 CAMK2N1Q7Z7J9 78 aa10.69□□□□□ -0.7
NPAS3-203ENST00000357798 KRTAP19-2Q3LHN2 52 aa10.62□□□□□ -0.71
NPAS3-203ENST00000357798 LUZP6Q538Z0 58 aa10.61□□□□□ -0.71
NPAS3-203ENST00000357798 HERC1Q15751 4861 aa10.55□□□□□ -0.72
NPAS3-203ENST00000357798 KRTAP23-1A1A580 65 aa10.42□□□□□ -0.74
NPAS3-203ENST00000357798 TNP1P09430 55 aa10.38□□□□□ -0.75
NPAS3-203ENST00000357798 J3QL48 77 aa10.27□□□□□ -0.77
NPAS3-203ENST00000357798 SPRR5A0A1B0GTR4 108 aa10.26□□□□□ -0.77
NPAS3-203ENST00000357798 FLGP20930 4061 aaPredicted RBP10.26□□□□□ -0.77
NPAS3-203ENST00000357798 UBR4Q5T4S7 5183 aa10.03□□□□□ -0.8
NPAS3-203ENST00000357798 RNF213Q63HN8 5207 aa9.95□□□□□ -0.82
NPAS3-203ENST00000357798 SPRR2GQ9BYE4 73 aa9.93□□□□□ -0.82
NPAS3-203ENST00000357798 MUC2Q02817 5179 aa9.91□□□□□ -0.82
NPAS3-203ENST00000357798 HMCN2Q8NDA2 5059 aa9.9□□□□□ -0.82
NPAS3-203ENST00000357798 KRTAP19-1Q8IUB9 90 aa9.82□□□□□ -0.84
NPAS3-203ENST00000357798 LCE2CQ5TA81 110 aa9.78□□□□□ -0.84
NPAS3-203ENST00000357798 LCE3AQ5TA76 89 aa9.75□□□□□ -0.85
NPAS3-203ENST00000357798 KRTAP8-1Q8IUC2 63 aa9.56□□□□□ -0.88
NPAS3-203ENST00000357798 M0R2T5 61 aa9.52□□□□□ -0.88
NPAS3-203ENST00000357798 MT1HP80294 61 aa9.47□□□□□ -0.89
NPAS3-203ENST00000357798 MT1FP04733 61 aa9.46□□□□□ -0.9
NPAS3-203ENST00000357798 MT2AP02795 61 aa9.46□□□□□ -0.9
NPAS3-203ENST00000357798 FAT4Q6V0I7 4981 aa9.45□□□□□ -0.9
NPAS3-203ENST00000357798 PRO2289Q9P1D8 64 aa9.44□□□□□ -0.9
NPAS3-203ENST00000357798 KRTAP10-10P60014 251 aa9.44□□□□□ -0.9
NPAS3-203ENST00000357798 KRTAP19-8Q3LI54 63 aa9.44□□□□□ -0.9
NPAS3-203ENST00000357798 INE1O15225 51 aa9.37□□□□□ -0.91
NPAS3-203ENST00000357798 KRTAP9-8Q9BYQ0 159 aa9.33□□□□□ -0.92
NPAS3-203ENST00000357798 KRTAP10-5P60370 271 aa9.32□□□□□ -0.92
NPAS3-203ENST00000357798 MT1XP80297 61 aa9.29□□□□□ -0.92
NPAS3-203ENST00000357798 KRTAP12-3P60328 96 aa9.28□□□□□ -0.92
NPAS3-203ENST00000357798 MT1BP07438 61 aa9.27□□□□□ -0.93
NPAS3-203ENST00000357798 KRTAP10-12P60413 245 aa9.25□□□□□ -0.93
NPAS3-203ENST00000357798 KRTAP10-7P60409 375 aaPredicted RBP9.04□□□□□ -0.96
NPAS3-203ENST00000357798 KRTAP9-3Q9BYQ3 159 aa8.93□□□□□ -0.98
NPAS3-203ENST00000357798 LCE3CQ5T5A8 94 aa8.77□□□□□ -1.01
NPAS3-203ENST00000357798 FSIP2Q5CZC0 6907 aa8.76□□□□□ -1.01
NPAS3-203ENST00000357798 KRTAP19-5Q3LI72 72 aa8.75□□□□□ -1.01
NPAS3-203ENST00000357798 LCE2BO14633 110 aa8.48□□□□□ -1.05
NPAS3-203ENST00000357798 KRTAP9-6A8MVA2 160 aa8.45□□□□□ -1.06
NPAS3-203ENST00000357798 USH2AO75445 5202 aa8.42□□□□□ -1.06
NPAS3-203ENST00000357798 KRTAP2-3P0C7H8 128 aa8.37□□□□□ -1.07
NPAS3-203ENST00000357798 KRTAP2-4Q9BYR9 128 aa8.37□□□□□ -1.07
NPAS3-203ENST00000357798 KRTAP2-1Q9BYU5 128 aa8.37□□□□□ -1.07
NPAS3-203ENST00000357798 LCE2AQ5TA79 106 aaPredicted RBP8.36□□□□□ -1.07
NPAS3-203ENST00000357798 KRTAP4-8A0A0G2JLE6 195 aa8.34□□□□□ -1.07
NPAS3-203ENST00000357798 KRTAP4-8Q9BYQ9 185 aa8.34□□□□□ -1.07
NPAS3-203ENST00000357798 KRTAP19-4Q3LI73 84 aa8.28□□□□□ -1.08
NPAS3-203ENST00000357798 KRTAP19-7Q3SYF9 63 aa8.27□□□□□ -1.08
NPAS3-203ENST00000357798 KMT2DO14686 5537 aa8.18□□□□□ -1.1
NPAS3-203ENST00000357798 KRTAP4-7Q9BYR0 210 aa8.16□□□□□ -1.1
NPAS3-203ENST00000357798 MT1LQ93083 61 aa8.08□□□□□ -1.12
NPAS3-203ENST00000357798 MT1EP04732 61 aa8.02□□□□□ -1.13
NPAS3-203ENST00000357798 SSPOA2VEC9 5147 aa7.95□□□□□ -1.14
NPAS3-203ENST00000357798 KRTAP9-2Q9BYQ4 174 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms