RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 FLGP20930 4061 aaPredicted RBP7.72□□□□□ -1.17
CTSA-202ENST00000354880 S4R3F8 94 aa7.72□□□□□ -1.17
CTSA-202ENST00000354880 LCA10Q71F78 164 aa7.7□□□□□ -1.18
CTSA-202ENST00000354880 SPTSSBQ8NFR3 76 aa7.66□□□□□ -1.18
CTSA-202ENST00000354880 KRTAP3-3Q9BYR6 98 aa7.66□□□□□ -1.18
CTSA-202ENST00000354880 FAT4Q6V0I7 4981 aa7.65□□□□□ -1.18
CTSA-202ENST00000354880 SMIM26A0A096LP01 95 aa7.64□□□□□ -1.19
CTSA-202ENST00000354880 LCE2CQ5TA81 110 aa7.64□□□□□ -1.19
CTSA-202ENST00000354880 CSAG1Q6PB30 78 aa7.57□□□□□ -1.2
CTSA-202ENST00000354880 Q1T7F1 81 aa7.52□□□□□ -1.2
CTSA-202ENST00000354880 V9GYY9 64 aa7.52□□□□□ -1.21
CTSA-202ENST00000354880 LINC01558Q9Y6Z2 57 aa7.5□□□□□ -1.21
CTSA-202ENST00000354880 MT1HP80294 61 aa7.5□□□□□ -1.21
CTSA-202ENST00000354880 A0A1B0GU69 56 aa7.43□□□□□ -1.22
CTSA-202ENST00000354880 M0R2T5 61 aa7.43□□□□□ -1.22
CTSA-202ENST00000354880 SEC61GP60059 68 aa7.43□□□□□ -1.22
CTSA-202ENST00000354880 PRR15LQ9BU68 103 aa7.41□□□□□ -1.22
CTSA-202ENST00000354880 PSPHP1O15172 72 aa7.4□□□□□ -1.23
CTSA-202ENST00000354880 H0YAA0 97 aa7.38□□□□□ -1.23
CTSA-202ENST00000354880 ADM2Q7Z4H4 148 aa7.36□□□□□ -1.23
CTSA-202ENST00000354880 KRTAP3-2Q9BYR7 98 aa7.35□□□□□ -1.23
CTSA-202ENST00000354880 KRTAP10-6P60371 365 aaPredicted RBP7.33□□□□□ -1.24
CTSA-202ENST00000354880 Q5VV11 94 aa7.33□□□□□ -1.24
CTSA-202ENST00000354880 P0C880 135 aa7.31□□□□□ -1.24
CTSA-202ENST00000354880 LCE2AQ5TA79 106 aaPredicted RBP7.28□□□□□ -1.24
CTSA-202ENST00000354880 A0A1B0GU33 70 aa7.24□□□□□ -1.25
CTSA-202ENST00000354880 KRTAP9-8Q9BYQ0 159 aa7.2□□□□□ -1.26
CTSA-202ENST00000354880 UQCR11O14957 56 aa7.2□□□□□ -1.26
CTSA-202ENST00000354880 LORP23490 312 aaPredicted RBP7.2□□□□□ -1.26
CTSA-202ENST00000354880 A6NED7 52 aa7.17□□□□□ -1.26
CTSA-202ENST00000354880 MT2AP02795 61 aa7.17□□□□□ -1.26
CTSA-202ENST00000354880 MT1FP04733 61 aa7.13□□□□□ -1.27
CTSA-202ENST00000354880 KRTAP10-10P60014 251 aa7.13□□□□□ -1.27
CTSA-202ENST00000354880 R4GN34 69 aa7.13□□□□□ -1.27
CTSA-202ENST00000354880 M0QZ58 72 aa7.12□□□□□ -1.27
CTSA-202ENST00000354880 SPATA8Q6RVD6 105 aa7.12□□□□□ -1.27
CTSA-202ENST00000354880 KRTAP13-4Q3LI77 160 aa7.11□□□□□ -1.27
CTSA-202ENST00000354880 CRIPTQ9P021 101 aa7.11□□□□□ -1.27
CTSA-202ENST00000354880 MIR22HGQ0VDD5 57 aa7.09□□□□□ -1.27
CTSA-202ENST00000354880 CDC42SE1Q9NRR8 79 aa7.03□□□□□ -1.28
CTSA-202ENST00000354880 BRK1Q8WUW1 75 aa7.01□□□□□ -1.29
CTSA-202ENST00000354880 A8MU10 97 aa7□□□□□ -1.29
CTSA-202ENST00000354880 A0A0D9SG42 100 aa6.99□□□□□ -1.29
CTSA-202ENST00000354880 LINC01554Q52M75 96 aa6.98□□□□□ -1.29
CTSA-202ENST00000354880 SPRR2GQ9BYE4 73 aa6.98□□□□□ -1.29
CTSA-202ENST00000354880 KRTAP19-1Q8IUB9 90 aa6.97□□□□□ -1.29
CTSA-202ENST00000354880 KRTAP9-3Q9BYQ3 159 aa6.95□□□□□ -1.3
CTSA-202ENST00000354880 A6NN06 94 aa6.85□□□□□ -1.31
CTSA-202ENST00000354880 KRTAP12-1P59990 96 aa6.84□□□□□ -1.31
CTSA-202ENST00000354880 SPINT4Q6UDR6 99 aa6.83□□□□□ -1.32
CTSA-202ENST00000354880 PRO0628Q9UI54 55 aa6.83□□□□□ -1.32
CTSA-202ENST00000354880 KRTAP12-2P59991 146 aa6.82□□□□□ -1.32
CTSA-202ENST00000354880 K7ERS5 55 aa6.8□□□□□ -1.32
CTSA-202ENST00000354880 KRTAP19-8Q3LI54 63 aa6.8□□□□□ -1.32
CTSA-202ENST00000354880 LCE2BO14633 110 aa6.77□□□□□ -1.33
CTSA-202ENST00000354880 PLAC4Q8WY50 150 aa6.73□□□□□ -1.33
CTSA-202ENST00000354880 MT1BP07438 61 aa6.72□□□□□ -1.33
CTSA-202ENST00000354880 USH2AO75445 5202 aa6.66□□□□□ -1.34
CTSA-202ENST00000354880 CAMK2N1Q7Z7J9 78 aa6.66□□□□□ -1.34
CTSA-202ENST00000354880 LCE2DQ5TA82 110 aaPredicted RBP6.65□□□□□ -1.34
CTSA-202ENST00000354880 PMAIP1Q13794 54 aa6.63□□□□□ -1.35
CTSA-202ENST00000354880 ROMO1P60602 79 aa6.49□□□□□ -1.37
CTSA-202ENST00000354880 FSIP2Q5CZC0 6907 aa6.49□□□□□ -1.37
CTSA-202ENST00000354880 MT1XP80297 61 aa6.48□□□□□ -1.37
CTSA-202ENST00000354880 KRTAP9-2Q9BYQ4 174 aa6.48□□□□□ -1.37
CTSA-202ENST00000354880 C10orf95Q9H7T3 257 aa6.48□□□□□ -1.37
CTSA-202ENST00000354880 SSPOA2VEC9 5147 aa6.48□□□□□ -1.37
CTSA-202ENST00000354880 KRTAP10-5P60370 271 aa6.47□□□□□ -1.37
CTSA-202ENST00000354880 PRO2289Q9P1D8 64 aa6.44□□□□□ -1.38
CTSA-202ENST00000354880 KRTAP19-6Q3LI70 58 aa6.39□□□□□ -1.39
CTSA-202ENST00000354880 TNP1P09430 55 aa6.32□□□□□ -1.4
CTSA-202ENST00000354880 KTN1-AS1Q86SY8 53 aa6.32□□□□□ -1.4
CTSA-202ENST00000354880 KRTAP25-1Q3LHN0 102 aa6.3□□□□□ -1.4
CTSA-202ENST00000354880 KRTAP10-7P60409 375 aaPredicted RBP6.22□□□□□ -1.41
CTSA-202ENST00000354880 PRAC1Q96KF2 57 aa6.21□□□□□ -1.42
CTSA-202ENST00000354880 FCGBPQ9Y6R7 5405 aaPredicted RBP6.21□□□□□ -1.42
CTSA-202ENST00000354880 CRCT1Q9UGL9 99 aa6.2□□□□□ -1.42
CTSA-202ENST00000354880 KRTAP10-12P60413 245 aa6.15□□□□□ -1.43
CTSA-202ENST00000354880 KRTAP23-1A1A580 65 aa6.09□□□□□ -1.44
CTSA-202ENST00000354880 KMT2DO14686 5537 aa6.08□□□□□ -1.44
CTSA-202ENST00000354880 PP632Q6XCG6 107 aa6.06□□□□□ -1.44
CTSA-202ENST00000354880 LCE3AQ5TA76 89 aa6.06□□□□□ -1.44
CTSA-202ENST00000354880 KRTAP9-6A0A140TA67 174 aa6.05□□□□□ -1.44
CTSA-202ENST00000354880 KRTAP4-8A0A0G2JLE6 195 aa6□□□□□ -1.45
CTSA-202ENST00000354880 KRTAP4-8Q9BYQ9 185 aa6□□□□□ -1.45
CTSA-202ENST00000354880 MACF1Q9UPN3 7388 aaKnown RBP5.94□□□□□ -1.46
CTSA-202ENST00000354880 KRTAP8-1Q8IUC2 63 aa5.93□□□□□ -1.46
CTSA-202ENST00000354880 KRTAP19-5Q3LI72 72 aa5.83□□□□□ -1.48
CTSA-202ENST00000354880 KRTAP12-3P60328 96 aa5.83□□□□□ -1.48
CTSA-202ENST00000354880 KRTAP19-7Q3SYF9 63 aa5.78□□□□□ -1.48
CTSA-202ENST00000354880 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.76□□□□□ -1.49
CTSA-202ENST00000354880 SYNE2Q8WXH0 6885 aaKnown RBP5.75□□□□□ -1.49
CTSA-202ENST00000354880 MT1EP04732 61 aa5.69□□□□□ -1.5
CTSA-202ENST00000354880 KRTAP15-1Q3LI76 137 aa5.68□□□□□ -1.5
CTSA-202ENST00000354880 SPRR2FQ96RM1 72 aa5.67□□□□□ -1.5
CTSA-202ENST00000354880 MUC12Q9UKN1 5478 aa5.66□□□□□ -1.5
CTSA-202ENST00000354880 KRTAP5-9P26371 169 aa5.64□□□□□ -1.51
CTSA-202ENST00000354880 KRTAP6-3Q3LI67 103 aa5.58□□□□□ -1.52
CTSA-202ENST00000354880 MT1LQ93083 61 aa5.56□□□□□ -1.52
CTSA-202ENST00000354880 MDN1Q9NU22 5596 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms