RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 MP68P56378 58 aa7.38□□□□□ -1.23
PDGFA-201ENST00000354513 C5orf47Q569G3 176 aa7.38□□□□□ -1.23
PDGFA-201ENST00000354513 TRAV7A0A075B6U4 112 aa7.36□□□□□ -1.23
PDGFA-201ENST00000354513 C1orf64Q8NEQ6 169 aa7.35□□□□□ -1.23
PDGFA-201ENST00000354513 LINC00208Q96KT6 92 aa7.35□□□□□ -1.23
PDGFA-201ENST00000354513 CYP4F30PQ9H0H9 118 aa7.35□□□□□ -1.23
PDGFA-201ENST00000354513 H3BPC8 53 aa7.31□□□□□ -1.24
PDGFA-201ENST00000354513 C4orf26Q17RF5 130 aa7.29□□□□□ -1.24
PDGFA-201ENST00000354513 SERP2Q8N6R1 65 aa7.27□□□□□ -1.24
PDGFA-201ENST00000354513 NEBP20929 6669 aa7.27□□□□□ -1.25
PDGFA-201ENST00000354513 MT1BP07438 61 aa7.25□□□□□ -1.25
PDGFA-201ENST00000354513 KLKP1Q107X0 134 aa7.25□□□□□ -1.25
PDGFA-201ENST00000354513 C20orf197Q8N268 126 aa7.19□□□□□ -1.26
PDGFA-201ENST00000354513 SNURFQ9Y675 71 aa7.19□□□□□ -1.26
PDGFA-201ENST00000354513 KRTAP3-1Q9BYR8 98 aa7.18□□□□□ -1.26
PDGFA-201ENST00000354513 COX7CP15954 63 aa7.17□□□□□ -1.26
PDGFA-201ENST00000354513 ANAPC13Q9BS18 74 aa7.17□□□□□ -1.26
PDGFA-201ENST00000354513 KRTAP19-8Q3LI54 63 aa7.16□□□□□ -1.26
PDGFA-201ENST00000354513 MUC12Q9UKN1 5478 aa7.15□□□□□ -1.27
PDGFA-201ENST00000354513 A6NN06 94 aa7.14□□□□□ -1.27
PDGFA-201ENST00000354513 SPRR2GQ9BYE4 73 aa7.13□□□□□ -1.27
PDGFA-201ENST00000354513 Q5VV11 94 aa7.1□□□□□ -1.27
PDGFA-201ENST00000354513 KRTAP10-5P60370 271 aa7.09□□□□□ -1.27
PDGFA-201ENST00000354513 A8MUN3 132 aa7.08□□□□□ -1.28
PDGFA-201ENST00000354513 LCA10Q71F78 164 aa7.07□□□□□ -1.28
PDGFA-201ENST00000354513 S4R3F8 94 aa7.07□□□□□ -1.28
PDGFA-201ENST00000354513 DMAC1Q96GE9 116 aa7.03□□□□□ -1.28
PDGFA-201ENST00000354513 KRTAP5-9P26371 169 aa7.02□□□□□ -1.28
PDGFA-201ENST00000354513 CCDC179H3BU77 68 aa7.01□□□□□ -1.29
PDGFA-201ENST00000354513 CSAG1Q6PB30 78 aa7.01□□□□□ -1.29
PDGFA-201ENST00000354513 NDUFC1O43677 76 aa7□□□□□ -1.29
PDGFA-201ENST00000354513 SPANXA2-OT1Q8N9U9 137 aa7□□□□□ -1.29
PDGFA-201ENST00000354513 CYSTM1Q9H1C7 97 aa7□□□□□ -1.29
PDGFA-201ENST00000354513 KRTAP20-1Q3LI63 56 aa6.99□□□□□ -1.29
PDGFA-201ENST00000354513 H7BZZ5 65 aa6.96□□□□□ -1.3
PDGFA-201ENST00000354513 ACYP2P14621 99 aa6.96□□□□□ -1.3
PDGFA-201ENST00000354513 KMT2DO14686 5537 aa6.92□□□□□ -1.3
PDGFA-201ENST00000354513 MDN1Q9NU22 5596 aa6.91□□□□□ -1.3
PDGFA-201ENST00000354513 LOC100996750A0A140TA64 210 aa6.87□□□□□ -1.31
PDGFA-201ENST00000354513 KRTAP4-6Q9BYQ5 205 aa6.87□□□□□ -1.31
PDGFA-201ENST00000354513 CHKB-CPT1BH3BT56 60 aa6.85□□□□□ -1.31
PDGFA-201ENST00000354513 CRIPTQ9P021 101 aa6.81□□□□□ -1.32
PDGFA-201ENST00000354513 COA5Q86WW8 74 aa6.8□□□□□ -1.32
PDGFA-201ENST00000354513 SPTSSBQ8NFR3 76 aa6.79□□□□□ -1.32
PDGFA-201ENST00000354513 ATP5EP56381 51 aaPredicted RBP6.77□□□□□ -1.32
PDGFA-201ENST00000354513 PCP4P48539 62 aa6.76□□□□□ -1.33
PDGFA-201ENST00000354513 TMEM258P61165 79 aa6.76□□□□□ -1.33
PDGFA-201ENST00000354513 H0YAA0 97 aa6.73□□□□□ -1.33
PDGFA-201ENST00000354513 KRTAP2-3P0C7H8 128 aa6.73□□□□□ -1.33
PDGFA-201ENST00000354513 KRTAP2-4Q9BYR9 128 aa6.73□□□□□ -1.33
PDGFA-201ENST00000354513 MT1XP80297 61 aa6.71□□□□□ -1.34
PDGFA-201ENST00000354513 ADM2Q7Z4H4 148 aa6.71□□□□□ -1.34
PDGFA-201ENST00000354513 SPRR2FQ96RM1 72 aa6.7□□□□□ -1.34
PDGFA-201ENST00000354513 SPRR2EP22531 72 aa6.67□□□□□ -1.34
PDGFA-201ENST00000354513 SPRR2BP35325 72 aa6.67□□□□□ -1.34
PDGFA-201ENST00000354513 SPRR2AP35326 72 aa6.67□□□□□ -1.34
PDGFA-201ENST00000354513 P0C880 135 aa6.6□□□□□ -1.35
PDGFA-201ENST00000354513 LCE1AQ5T7P2 110 aa6.59□□□□□ -1.35
PDGFA-201ENST00000354513 PRO2289Q9P1D8 64 aa6.58□□□□□ -1.36
PDGFA-201ENST00000354513 KRTAP8-1Q8IUC2 63 aa6.57□□□□□ -1.36
PDGFA-201ENST00000354513 KRTAP12-2P59991 146 aa6.56□□□□□ -1.36
PDGFA-201ENST00000354513 SERP1Q9Y6X1 66 aa6.55□□□□□ -1.36
PDGFA-201ENST00000354513 SEC61GP60059 68 aa6.52□□□□□ -1.37
PDGFA-201ENST00000354513 KRTAP4-8A0A0G2JLE6 195 aa6.51□□□□□ -1.37
PDGFA-201ENST00000354513 KRTAP4-8Q9BYQ9 185 aa6.51□□□□□ -1.37
PDGFA-201ENST00000354513 PLAC4Q8WY50 150 aa6.5□□□□□ -1.37
PDGFA-201ENST00000354513 R4GN34 69 aa6.5□□□□□ -1.37
PDGFA-201ENST00000354513 KRTAP2-2Q9BYT5 123 aa6.49□□□□□ -1.37
PDGFA-201ENST00000354513 KRTAP2-1Q9BYU5 128 aa6.49□□□□□ -1.37
PDGFA-201ENST00000354513 M0QZ58 72 aa6.47□□□□□ -1.37
PDGFA-201ENST00000354513 A0A1B0GU69 56 aa6.45□□□□□ -1.38
PDGFA-201ENST00000354513 SPRR2DP22532 72 aa6.44□□□□□ -1.38
PDGFA-201ENST00000354513 LINC01558Q9Y6Z2 57 aa6.41□□□□□ -1.38
PDGFA-201ENST00000354513 KRTAP10-7P60409 375 aaPredicted RBP6.4□□□□□ -1.39
PDGFA-201ENST00000354513 PRR15LQ9BU68 103 aa6.38□□□□□ -1.39
PDGFA-201ENST00000354513 A0A1B0GU33 70 aa6.36□□□□□ -1.39
PDGFA-201ENST00000354513 LINC01554Q52M75 96 aa6.36□□□□□ -1.39
PDGFA-201ENST00000354513 KRTAP10-12P60413 245 aa6.35□□□□□ -1.39
PDGFA-201ENST00000354513 RPS28P62857 69 aaKnown RBP6.35□□□□□ -1.39
PDGFA-201ENST00000354513 KRTAP13-4Q3LI77 160 aa6.34□□□□□ -1.39
PDGFA-201ENST00000354513 SMIM26A0A096LP01 95 aa6.33□□□□□ -1.4
PDGFA-201ENST00000354513 LCE3BQ5TA77 95 aa6.3□□□□□ -1.4
PDGFA-201ENST00000354513 V9GYY9 64 aa6.3□□□□□ -1.4
PDGFA-201ENST00000354513 Q1T7F1 81 aa6.28□□□□□ -1.4
PDGFA-201ENST00000354513 SPATA8Q6RVD6 105 aa6.28□□□□□ -1.4
PDGFA-201ENST00000354513 A0A0D9SG42 100 aa6.22□□□□□ -1.41
PDGFA-201ENST00000354513 PSPHP1O15172 72 aa6.22□□□□□ -1.41
PDGFA-201ENST00000354513 UQCR11O14957 56 aa6.17□□□□□ -1.42
PDGFA-201ENST00000354513 A8MU10 97 aa6.14□□□□□ -1.43
PDGFA-201ENST00000354513 SPINT4Q6UDR6 99 aa6.1□□□□□ -1.43
PDGFA-201ENST00000354513 KRTAP12-1P59990 96 aa6.08□□□□□ -1.44
PDGFA-201ENST00000354513 MIR22HGQ0VDD5 57 aa6.08□□□□□ -1.44
PDGFA-201ENST00000354513 CAMK2N1Q7Z7J9 78 aa6.05□□□□□ -1.44
PDGFA-201ENST00000354513 GPR98Q8WXG9 6306 aa6.04□□□□□ -1.44
PDGFA-201ENST00000354513 A6NED7 52 aa6.03□□□□□ -1.44
PDGFA-201ENST00000354513 DSTQ03001 7570 aaKnown RBP6.03□□□□□ -1.44
PDGFA-201ENST00000354513 KRTAP19-7Q3SYF9 63 aa6.01□□□□□ -1.45
PDGFA-201ENST00000354513 LCE5AQ5TCM9 118 aa6□□□□□ -1.45
PDGFA-201ENST00000354513 MT1EP04732 61 aa5.96□□□□□ -1.46
PDGFA-201ENST00000354513 KRTAP4-9Q9BYQ8 210 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms