RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 H1FX-AS1Q4G0G2 97 aa1.98□□□□□ -2.09
RNF38-203ENST00000353739 LRP1Q07954 4544 aaKnown RBP1.97□□□□□ -2.09
RNF38-203ENST00000353739 KIAA1109Q2LD37 5005 aa1.97□□□□□ -2.09
RNF38-203ENST00000353739 HSPG2P98160 4391 aa1.97□□□□□ -2.09
RNF38-203ENST00000353739 RYR1P21817 5038 aa1.97□□□□□ -2.09
RNF38-203ENST00000353739 S4R3F8 94 aa1.97□□□□□ -2.09
RNF38-203ENST00000353739 A0A1B0GU33 70 aa1.97□□□□□ -2.09
RNF38-203ENST00000353739 XP32Q5T750 250 aa1.96□□□□□ -2.09
RNF38-203ENST00000353739 TPRXLQ17RH7 258 aa1.96□□□□□ -2.1
RNF38-203ENST00000353739 LUZP6Q538Z0 58 aa1.96□□□□□ -2.1
RNF38-203ENST00000353739 TNXBP22105 4242 aa1.95□□□□□ -2.1
RNF38-203ENST00000353739 EPPK1P58107 5090 aaKnown RBP1.95□□□□□ -2.1
RNF38-203ENST00000353739 A8MU10 97 aa1.94□□□□□ -2.1
RNF38-203ENST00000353739 KRTAP3-1Q9BYR8 98 aa1.94□□□□□ -2.1
RNF38-203ENST00000353739 FAT3Q8TDW7 4589 aa1.94□□□□□ -2.1
RNF38-203ENST00000353739 FLG2Q5D862 2391 aaPredicted RBP1.94□□□□□ -2.1
RNF38-203ENST00000353739 MT1HL1P0DM35 61 aa1.91□□□□□ -2.1
RNF38-203ENST00000353739 ROMO1P60602 79 aa1.91□□□□□ -2.1
RNF38-203ENST00000353739 H0YAA0 97 aa1.91□□□□□ -2.1
RNF38-203ENST00000353739 CSAG1Q6PB30 78 aa1.91□□□□□ -2.1
RNF38-203ENST00000353739 ABCA13Q86UQ4 5058 aa1.89□□□□□ -2.11
RNF38-203ENST00000353739 DMBT1Q9UGM3 2413 aaPredicted RBP1.89□□□□□ -2.11
RNF38-203ENST00000353739 M0QZ58 72 aa1.88□□□□□ -2.11
RNF38-203ENST00000353739 MUC2Q02817 5179 aa1.88□□□□□ -2.11
RNF38-203ENST00000353739 M0R2T5 61 aa1.87□□□□□ -2.11
RNF38-203ENST00000353739 PRAC1Q96KF2 57 aa1.87□□□□□ -2.11
RNF38-203ENST00000353739 KRTAP3-3Q9BYR6 98 aa1.87□□□□□ -2.11
RNF38-203ENST00000353739 ADM2Q7Z4H4 148 aa1.86□□□□□ -2.11
RNF38-203ENST00000353739 LRP2P98164 4655 aa1.86□□□□□ -2.11
RNF38-203ENST00000353739 KRTAP10-6P60371 365 aaPredicted RBP1.85□□□□□ -2.11
RNF38-203ENST00000353739 KRTAP25-1Q3LHN0 102 aa1.85□□□□□ -2.11
RNF38-203ENST00000353739 MUC17Q685J3 4493 aa1.85□□□□□ -2.11
RNF38-203ENST00000353739 KRTAP3-2Q9BYR7 98 aa1.85□□□□□ -2.11
RNF38-203ENST00000353739 HERC2O95714 4834 aa1.84□□□□□ -2.12
RNF38-203ENST00000353739 A0A0D9SG42 100 aa1.82□□□□□ -2.12
RNF38-203ENST00000353739 CRIPTQ9P021 101 aa1.81□□□□□ -2.12
RNF38-203ENST00000353739 BIRC6Q9NR09 4857 aa1.81□□□□□ -2.12
RNF38-203ENST00000353739 P0C880 135 aa1.8□□□□□ -2.12
RNF38-203ENST00000353739 KRTAP4-5Q9BYR2 181 aa1.8□□□□□ -2.12
RNF38-203ENST00000353739 R4GN34 69 aa1.8□□□□□ -2.12
RNF38-203ENST00000353739 PCLOQ9Y6V0 5065 aa1.79□□□□□ -2.12
RNF38-203ENST00000353739 KRTAP13-4Q3LI77 160 aa1.79□□□□□ -2.12
RNF38-203ENST00000353739 SPINT4Q6UDR6 99 aa1.79□□□□□ -2.12
RNF38-203ENST00000353739 NDUFAF8A1L188 74 aa1.78□□□□□ -2.12
RNF38-203ENST00000353739 KRTAP12-1P59990 96 aa1.78□□□□□ -2.12
RNF38-203ENST00000353739 HERC1Q15751 4861 aa1.77□□□□□ -2.13
RNF38-203ENST00000353739 LOC100996750A0A140TA64 210 aa1.77□□□□□ -2.13
RNF38-203ENST00000353739 KRTAP4-6Q9BYQ5 205 aa1.77□□□□□ -2.13
RNF38-203ENST00000353739 KRTAP12-2P59991 146 aa1.77□□□□□ -2.13
RNF38-203ENST00000353739 PLAC4Q8WY50 150 aa1.75□□□□□ -2.13
RNF38-203ENST00000353739 HMCN2Q8NDA2 5059 aa1.74□□□□□ -2.13
RNF38-203ENST00000353739 PP632Q6XCG6 107 aa1.74□□□□□ -2.13
RNF38-203ENST00000353739 PRO2289Q9P1D8 64 aa1.73□□□□□ -2.13
RNF38-203ENST00000353739 KRTAP4-1Q9BYQ7 146 aa1.71□□□□□ -2.14
RNF38-203ENST00000353739 KRTAP19-2Q3LHN2 52 aa1.71□□□□□ -2.14
RNF38-203ENST00000353739 INE1O15225 51 aa1.7□□□□□ -2.14
RNF38-203ENST00000353739 LCE2AQ5TA79 106 aaPredicted RBP1.69□□□□□ -2.14
RNF38-203ENST00000353739 FAT4Q6V0I7 4981 aa1.68□□□□□ -2.14
RNF38-203ENST00000353739 KRTAP15-1Q3LI76 137 aa1.68□□□□□ -2.14
RNF38-203ENST00000353739 TNP1P09430 55 aa1.67□□□□□ -2.14
RNF38-203ENST00000353739 C10orf95Q9H7T3 257 aa1.67□□□□□ -2.14
RNF38-203ENST00000353739 RNF213Q63HN8 5207 aa1.67□□□□□ -2.14
RNF38-203ENST00000353739 FLGP20930 4061 aaPredicted RBP1.66□□□□□ -2.14
RNF38-203ENST00000353739 UBR4Q5T4S7 5183 aa1.66□□□□□ -2.14
RNF38-203ENST00000353739 LORP23490 312 aaPredicted RBP1.65□□□□□ -2.15
RNF38-203ENST00000353739 KRTAP19-4Q3LI73 84 aa1.64□□□□□ -2.15
RNF38-203ENST00000353739 SPRR2GQ9BYE4 73 aa1.64□□□□□ -2.15
RNF38-203ENST00000353739 LCE2BO14633 110 aa1.63□□□□□ -2.15
RNF38-203ENST00000353739 MT1HP80294 61 aa1.62□□□□□ -2.15
RNF38-203ENST00000353739 LCE2CQ5TA81 110 aa1.62□□□□□ -2.15
RNF38-203ENST00000353739 KRTAP10-10P60014 251 aa1.6□□□□□ -2.15
RNF38-203ENST00000353739 KRTAP19-8Q3LI54 63 aa1.58□□□□□ -2.16
RNF38-203ENST00000353739 MT2AP02795 61 aa1.58□□□□□ -2.16
RNF38-203ENST00000353739 KRTAP19-1Q8IUB9 90 aa1.56□□□□□ -2.16
RNF38-203ENST00000353739 KRTAP9-8Q9BYQ0 159 aa1.55□□□□□ -2.16
RNF38-203ENST00000353739 MT1FP04733 61 aa1.55□□□□□ -2.16
RNF38-203ENST00000353739 KRTAP5-3Q6L8H2 238 aa1.54□□□□□ -2.16
RNF38-203ENST00000353739 USH2AO75445 5202 aa1.53□□□□□ -2.16
RNF38-203ENST00000353739 SPRR5A0A1B0GTR4 108 aa1.51□□□□□ -2.17
RNF38-203ENST00000353739 KRTAP10-12P60413 245 aa1.51□□□□□ -2.17
RNF38-203ENST00000353739 LCE3AQ5TA76 89 aa1.51□□□□□ -2.17
RNF38-203ENST00000353739 MT1BP07438 61 aa1.5□□□□□ -2.17
RNF38-203ENST00000353739 KRTAP8-1Q8IUC2 63 aa1.5□□□□□ -2.17
RNF38-203ENST00000353739 KRTAP9-3Q9BYQ3 159 aa1.5□□□□□ -2.17
RNF38-203ENST00000353739 KRTAP10-5P60370 271 aa1.49□□□□□ -2.17
RNF38-203ENST00000353739 MT1XP80297 61 aa1.49□□□□□ -2.17
RNF38-203ENST00000353739 KRTAP4-8Q9BYQ9 185 aa1.48□□□□□ -2.17
RNF38-203ENST00000353739 KMT2DO14686 5537 aa1.48□□□□□ -2.17
RNF38-203ENST00000353739 KRTAP12-3P60328 96 aa1.47□□□□□ -2.17
RNF38-203ENST00000353739 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.45□□□□□ -2.18
RNF38-203ENST00000353739 MT3P25713 68 aa1.45□□□□□ -2.18
RNF38-203ENST00000353739 KRTAP9-2Q9BYQ4 174 aa1.43□□□□□ -2.18
RNF38-203ENST00000353739 LCE3BQ5TA77 95 aa1.42□□□□□ -2.18
RNF38-203ENST00000353739 KRTAP10-7P60409 375 aaPredicted RBP1.42□□□□□ -2.18
RNF38-203ENST00000353739 KRTAP5-2Q701N4 177 aa1.41□□□□□ -2.18
RNF38-203ENST00000353739 GPR98Q8WXG9 6306 aa1.4□□□□□ -2.19
RNF38-203ENST00000353739 KRTAP9-6A0A140TA67 174 aa1.4□□□□□ -2.19
RNF38-203ENST00000353739 KRTAP19-5Q3LI72 72 aa1.39□□□□□ -2.19
RNF38-203ENST00000353739 LCE3CQ5T5A8 94 aa1.39□□□□□ -2.19
RNF38-203ENST00000353739 KRTAP4-8A0A0G2JLE6 195 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms