RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 RYR2Q92736 4967 aa8.11□□□□□ -1.11
TNFSF13-202ENST00000349228 RPL37P61927 97 aaKnown RBP8.11□□□□□ -1.11
TNFSF13-202ENST00000349228 K7ERS5 55 aa8.08□□□□□ -1.12
TNFSF13-202ENST00000349228 H1FX-AS1Q4G0G2 97 aa8.08□□□□□ -1.12
TNFSF13-202ENST00000349228 H0YAA0 97 aa8.06□□□□□ -1.12
TNFSF13-202ENST00000349228 XP32Q5T750 250 aa8.02□□□□□ -1.13
TNFSF13-202ENST00000349228 KRTAP25-1Q3LHN0 102 aa8□□□□□ -1.13
TNFSF13-202ENST00000349228 RYR3Q15413 4870 aa7.99□□□□□ -1.13
TNFSF13-202ENST00000349228 FAT3Q8TDW7 4589 aa7.92□□□□□ -1.14
TNFSF13-202ENST00000349228 TNXBP22105 4242 aa7.92□□□□□ -1.14
TNFSF13-202ENST00000349228 NDUFAF8A1L188 74 aa7.92□□□□□ -1.14
TNFSF13-202ENST00000349228 KRTAP3-3Q9BYR6 98 aa7.92□□□□□ -1.14
TNFSF13-202ENST00000349228 MT1HL1P0DM35 61 aa7.91□□□□□ -1.14
TNFSF13-202ENST00000349228 S4R3F8 94 aa7.91□□□□□ -1.14
TNFSF13-202ENST00000349228 KRTAP10-6P60371 365 aaPredicted RBP7.85□□□□□ -1.15
TNFSF13-202ENST00000349228 HSPG2P98160 4391 aa7.84□□□□□ -1.15
TNFSF13-202ENST00000349228 TPRXLQ17RH7 258 aa7.83□□□□□ -1.16
TNFSF13-202ENST00000349228 KRTAP17-1Q9BYP8 105 aa7.83□□□□□ -1.16
TNFSF13-202ENST00000349228 LRP1Q07954 4544 aaKnown RBP7.83□□□□□ -1.16
TNFSF13-202ENST00000349228 DMBT1Q9UGM3 2413 aaPredicted RBP7.82□□□□□ -1.16
TNFSF13-202ENST00000349228 KRTAP3-2Q9BYR7 98 aa7.79□□□□□ -1.16
TNFSF13-202ENST00000349228 RYR1P21817 5038 aa7.76□□□□□ -1.17
TNFSF13-202ENST00000349228 CAMK2N1Q7Z7J9 78 aa7.75□□□□□ -1.17
TNFSF13-202ENST00000349228 EPPK1P58107 5090 aaKnown RBP7.71□□□□□ -1.18
TNFSF13-202ENST00000349228 KRTAP13-4Q3LI77 160 aa7.68□□□□□ -1.18
TNFSF13-202ENST00000349228 KRTAP15-1Q3LI76 137 aa7.68□□□□□ -1.18
TNFSF13-202ENST00000349228 A0A0D9SG42 100 aa7.62□□□□□ -1.19
TNFSF13-202ENST00000349228 KIAA1109Q2LD37 5005 aa7.59□□□□□ -1.19
TNFSF13-202ENST00000349228 M0QZ58 72 aa7.58□□□□□ -1.2
TNFSF13-202ENST00000349228 SPINT4Q6UDR6 99 aa7.56□□□□□ -1.2
TNFSF13-202ENST00000349228 KRTAP23-1A1A580 65 aa7.53□□□□□ -1.2
TNFSF13-202ENST00000349228 MYCBP2O75592 4640 aa7.53□□□□□ -1.2
TNFSF13-202ENST00000349228 KRTAP4-5Q9BYR2 181 aa7.47□□□□□ -1.21
TNFSF13-202ENST00000349228 KRTAP12-1P59990 96 aa7.45□□□□□ -1.22
TNFSF13-202ENST00000349228 KRTAP12-2P59991 146 aa7.45□□□□□ -1.22
TNFSF13-202ENST00000349228 BIRC6Q9NR09 4857 aa7.43□□□□□ -1.22
TNFSF13-202ENST00000349228 CRIPTQ9P021 101 aa7.43□□□□□ -1.22
TNFSF13-202ENST00000349228 LRP2P98164 4655 aa7.38□□□□□ -1.23
TNFSF13-202ENST00000349228 R4GN34 69 aa7.33□□□□□ -1.24
TNFSF13-202ENST00000349228 HERC2O95714 4834 aa7.32□□□□□ -1.24
TNFSF13-202ENST00000349228 LPAP08519 4548 aa7.31□□□□□ -1.24
TNFSF13-202ENST00000349228 KRTAP4-1Q9BYQ7 146 aa7.27□□□□□ -1.25
TNFSF13-202ENST00000349228 ABCA13Q86UQ4 5058 aa7.26□□□□□ -1.25
TNFSF13-202ENST00000349228 C10orf95Q9H7T3 257 aa7.22□□□□□ -1.25
TNFSF13-202ENST00000349228 KRTAP19-2Q3LHN2 52 aa7.21□□□□□ -1.26
TNFSF13-202ENST00000349228 LCE2DQ5TA82 110 aaPredicted RBP7.14□□□□□ -1.27
TNFSF13-202ENST00000349228 MUC17Q685J3 4493 aa7.14□□□□□ -1.27
TNFSF13-202ENST00000349228 LORP23490 312 aaPredicted RBP7.12□□□□□ -1.27
TNFSF13-202ENST00000349228 PCLOQ9Y6V0 5065 aa7.08□□□□□ -1.28
TNFSF13-202ENST00000349228 PRO2289Q9P1D8 64 aa7.05□□□□□ -1.28
TNFSF13-202ENST00000349228 PP632Q6XCG6 107 aa6.91□□□□□ -1.3
TNFSF13-202ENST00000349228 HERC1Q15751 4861 aa6.87□□□□□ -1.31
TNFSF13-202ENST00000349228 LCE2AQ5TA79 106 aaPredicted RBP6.87□□□□□ -1.31
TNFSF13-202ENST00000349228 FLGP20930 4061 aaPredicted RBP6.86□□□□□ -1.31
TNFSF13-202ENST00000349228 LCE2CQ5TA81 110 aa6.83□□□□□ -1.32
TNFSF13-202ENST00000349228 PLAC4Q8WY50 150 aa6.76□□□□□ -1.33
TNFSF13-202ENST00000349228 HMCN2Q8NDA2 5059 aa6.74□□□□□ -1.33
TNFSF13-202ENST00000349228 TNP1P09430 55 aa6.72□□□□□ -1.33
TNFSF13-202ENST00000349228 SPRR2GQ9BYE4 73 aa6.71□□□□□ -1.33
TNFSF13-202ENST00000349228 M0R2T5 61 aa6.64□□□□□ -1.35
TNFSF13-202ENST00000349228 MUC2Q02817 5179 aa6.62□□□□□ -1.35
TNFSF13-202ENST00000349228 MT1HP80294 61 aa6.61□□□□□ -1.35
TNFSF13-202ENST00000349228 KRTAP19-1Q8IUB9 90 aa6.6□□□□□ -1.35
TNFSF13-202ENST00000349228 INE1O15225 51 aa6.57□□□□□ -1.36
TNFSF13-202ENST00000349228 LCE2BO14633 110 aa6.54□□□□□ -1.36
TNFSF13-202ENST00000349228 MT2AP02795 61 aa6.5□□□□□ -1.37
TNFSF13-202ENST00000349228 KRTAP10-10P60014 251 aa6.5□□□□□ -1.37
TNFSF13-202ENST00000349228 UBR4Q5T4S7 5183 aa6.47□□□□□ -1.37
TNFSF13-202ENST00000349228 MT1FP04733 61 aa6.47□□□□□ -1.37
TNFSF13-202ENST00000349228 KRTAP9-8Q9BYQ0 159 aa6.46□□□□□ -1.38
TNFSF13-202ENST00000349228 KRTAP19-8Q3LI54 63 aa6.44□□□□□ -1.38
TNFSF13-202ENST00000349228 RNF213Q63HN8 5207 aa6.38□□□□□ -1.39
TNFSF13-202ENST00000349228 SPRR5A0A1B0GTR4 108 aa6.34□□□□□ -1.39
TNFSF13-202ENST00000349228 FAT4Q6V0I7 4981 aa6.3□□□□□ -1.4
TNFSF13-202ENST00000349228 LCE3AQ5TA76 89 aa6.28□□□□□ -1.4
TNFSF13-202ENST00000349228 MT1BP07438 61 aa6.27□□□□□ -1.41
TNFSF13-202ENST00000349228 KRTAP10-5P60370 271 aa6.22□□□□□ -1.41
TNFSF13-202ENST00000349228 KRTAP8-1Q8IUC2 63 aa6.22□□□□□ -1.41
TNFSF13-202ENST00000349228 MT1XP80297 61 aa6.21□□□□□ -1.42
TNFSF13-202ENST00000349228 KRTAP9-3Q9BYQ3 159 aa6.21□□□□□ -1.42
TNFSF13-202ENST00000349228 KRTAP10-12P60413 245 aa6.11□□□□□ -1.43
TNFSF13-202ENST00000349228 KRTAP12-3P60328 96 aa6.04□□□□□ -1.44
TNFSF13-202ENST00000349228 KRTAP10-7P60409 375 aaPredicted RBP5.98□□□□□ -1.45
TNFSF13-202ENST00000349228 KRTAP19-5Q3LI72 72 aa5.75□□□□□ -1.49
TNFSF13-202ENST00000349228 LCE3CQ5T5A8 94 aa5.69□□□□□ -1.5
TNFSF13-202ENST00000349228 KRTAP19-4Q3LI73 84 aa5.66□□□□□ -1.5
TNFSF13-202ENST00000349228 KRTAP4-8A0A0G2JLE6 195 aa5.57□□□□□ -1.52
TNFSF13-202ENST00000349228 KRTAP4-8Q9BYQ9 185 aa5.57□□□□□ -1.52
TNFSF13-202ENST00000349228 KRTAP19-7Q3SYF9 63 aa5.53□□□□□ -1.52
TNFSF13-202ENST00000349228 USH2AO75445 5202 aa5.44□□□□□ -1.54
TNFSF13-202ENST00000349228 KRTAP9-6A0A140TA67 174 aa5.43□□□□□ -1.54
TNFSF13-202ENST00000349228 KRTAP19-6Q3LI70 58 aa5.43□□□□□ -1.54
TNFSF13-202ENST00000349228 MT1EP04732 61 aa5.4□□□□□ -1.54
TNFSF13-202ENST00000349228 KRTAP9-2Q9BYQ4 174 aa5.4□□□□□ -1.54
TNFSF13-202ENST00000349228 MT1LQ93083 61 aa5.39□□□□□ -1.55
TNFSF13-202ENST00000349228 KRTAP9-6A8MVA2 160 aa5.36□□□□□ -1.55
TNFSF13-202ENST00000349228 KRTAP2-2Q9BYT5 123 aa5.33□□□□□ -1.56
TNFSF13-202ENST00000349228 KMT2DO14686 5537 aa5.28□□□□□ -1.56
TNFSF13-202ENST00000349228 KRTAP2-3P0C7H8 128 aa5.28□□□□□ -1.56
TNFSF13-202ENST00000349228 KRTAP4-7Q9BYR0 210 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms