RNA–Protein interactions for RNA: ENST00000349004.5

NDRG3-201, Transcript of NDRG family member 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NDRG3, Length 2,964 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG3-201ENST00000349004 KRTAP13-2Q52LG2 175 aa3.29□□□□□ -1.88
NDRG3-201ENST00000349004 COA5Q86WW8 74 aa3.29□□□□□ -1.88
NDRG3-201ENST00000349004 SPANXA2-OT1Q8N9U9 137 aa3.29□□□□□ -1.88
NDRG3-201ENST00000349004 TYMSOSQ8TAI1 123 aa3.29□□□□□ -1.88
NDRG3-201ENST00000349004 LUZP6Q538Z0 58 aa3.29□□□□□ -1.88
NDRG3-201ENST00000349004 SPAG11AQ6PDA7 123 aa3.27□□□□□ -1.89
NDRG3-201ENST00000349004 IGLV7-46A0A075B6I9 117 aa3.27□□□□□ -1.89
NDRG3-201ENST00000349004 LORP23490 312 aaPredicted RBP3.27□□□□□ -1.89
NDRG3-201ENST00000349004 MRPL34Q9BQ48 92 aaKnown RBP3.27□□□□□ -1.89
NDRG3-201ENST00000349004 HRES1P13985 223 aa3.26□□□□□ -1.89
NDRG3-201ENST00000349004 H3BPC8 53 aa3.25□□□□□ -1.89
NDRG3-201ENST00000349004 KRTAP13-3Q3SY46 172 aa3.24□□□□□ -1.89
NDRG3-201ENST00000349004 LINC01558Q9Y6Z2 57 aa3.24□□□□□ -1.89
NDRG3-201ENST00000349004 FSIP2Q5CZC0 6907 aa3.24□□□□□ -1.89
NDRG3-201ENST00000349004 LINC00304Q8N9R0 145 aa3.23□□□□□ -1.89
NDRG3-201ENST00000349004 TP53AIP1Q9HCN2 124 aa3.23□□□□□ -1.89
NDRG3-201ENST00000349004 SPINK7P58062 85 aa3.22□□□□□ -1.89
NDRG3-201ENST00000349004 K7ERS5 55 aa3.21□□□□□ -1.9
NDRG3-201ENST00000349004 ROMO1P60602 79 aa3.18□□□□□ -1.9
NDRG3-201ENST00000349004 C9orf92A6NGG3 77 aa3.18□□□□□ -1.9
NDRG3-201ENST00000349004 IGKV2D-30A0A075B6S6 120 aa3.16□□□□□ -1.9
NDRG3-201ENST00000349004 IGKV2-30P06310 120 aa3.16□□□□□ -1.9
NDRG3-201ENST00000349004 SSBP3-AS1Q7Z2R9 100 aa3.15□□□□□ -1.9
NDRG3-201ENST00000349004 CAMK2N1Q7Z7J9 78 aa3.15□□□□□ -1.91
NDRG3-201ENST00000349004 DMAC1Q96GE9 116 aa3.13□□□□□ -1.91
NDRG3-201ENST00000349004 ACYP2P14621 99 aa3.12□□□□□ -1.91
NDRG3-201ENST00000349004 KRTAP4-1Q9BYQ7 146 aa3.12□□□□□ -1.91
NDRG3-201ENST00000349004 CSAG1Q6PB30 78 aa3.11□□□□□ -1.91
NDRG3-201ENST00000349004 SPINK1P00995 79 aa3.1□□□□□ -1.91
NDRG3-201ENST00000349004 A8MUU9 505 aa3.1□□□□□ -1.91
NDRG3-201ENST00000349004 SPATA8Q6RVD6 105 aa3.1□□□□□ -1.91
NDRG3-201ENST00000349004 MIR22HGQ0VDD5 57 aa3.09□□□□□ -1.91
NDRG3-201ENST00000349004 A0A1B0GU69 56 aa3.07□□□□□ -1.92
NDRG3-201ENST00000349004 MUC17Q685J3 4493 aa3.07□□□□□ -1.92
NDRG3-201ENST00000349004 P0C880 135 aa3.07□□□□□ -1.92
NDRG3-201ENST00000349004 TPRXLQ17RH7 258 aa3.07□□□□□ -1.92
NDRG3-201ENST00000349004 C20orf166-AS1Q96NR2 134 aa3.07□□□□□ -1.92
NDRG3-201ENST00000349004 XP32Q5T750 250 aa3.06□□□□□ -1.92
NDRG3-201ENST00000349004 KRTAP4-8Q9BYQ9 185 aa3.06□□□□□ -1.92
NDRG3-201ENST00000349004 KRTAP3-1Q9BYR8 98 aa3.04□□□□□ -1.92
NDRG3-201ENST00000349004 NDUFAF8A1L188 74 aa3.03□□□□□ -1.92
NDRG3-201ENST00000349004 KRTAP25-1Q3LHN0 102 aa3.02□□□□□ -1.93
NDRG3-201ENST00000349004 USH2AO75445 5202 aa3.01□□□□□ -1.93
NDRG3-201ENST00000349004 UQCR11O14957 56 aa3□□□□□ -1.93
NDRG3-201ENST00000349004 H0YAA0 97 aa2.98□□□□□ -1.93
NDRG3-201ENST00000349004 M0R2T5 61 aa2.97□□□□□ -1.93
NDRG3-201ENST00000349004 COX6B2Q6YFQ2 88 aa2.97□□□□□ -1.93
NDRG3-201ENST00000349004 KRTAP9-2Q9BYQ4 174 aa2.97□□□□□ -1.93
NDRG3-201ENST00000349004 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.95□□□□□ -1.94
NDRG3-201ENST00000349004 RPS29P62273 56 aaKnown RBP2.95□□□□□ -1.94
NDRG3-201ENST00000349004 KRTAP9-6A0A140TA67 174 aa2.95□□□□□ -1.94
NDRG3-201ENST00000349004 RPL37P61927 97 aaKnown RBP2.93□□□□□ -1.94
NDRG3-201ENST00000349004 KRTAP19-2Q3LHN2 52 aa2.93□□□□□ -1.94
NDRG3-201ENST00000349004 CRIPTQ9P021 101 aa2.93□□□□□ -1.94
NDRG3-201ENST00000349004 FLGP20930 4061 aaPredicted RBP2.93□□□□□ -1.94
NDRG3-201ENST00000349004 MT1HP80294 61 aa2.92□□□□□ -1.94
NDRG3-201ENST00000349004 A0A1B0GU33 70 aa2.91□□□□□ -1.94
NDRG3-201ENST00000349004 KRTAP13-4Q3LI77 160 aa2.9□□□□□ -1.95
NDRG3-201ENST00000349004 H1FX-AS1Q4G0G2 97 aa2.89□□□□□ -1.95
NDRG3-201ENST00000349004 LCE3BQ5TA77 95 aa2.88□□□□□ -1.95
NDRG3-201ENST00000349004 KRTAP10-6P60371 365 aaPredicted RBP2.87□□□□□ -1.95
NDRG3-201ENST00000349004 A0A0D9SG42 100 aa2.86□□□□□ -1.95
NDRG3-201ENST00000349004 KRTAP15-1Q3LI76 137 aa2.86□□□□□ -1.95
NDRG3-201ENST00000349004 KRTAP4-12Q9BQ66 201 aa2.86□□□□□ -1.95
NDRG3-201ENST00000349004 KRTAP4-8A0A0G2JLE6 195 aa2.84□□□□□ -1.95
NDRG3-201ENST00000349004 SPINT4Q6UDR6 99 aa2.82□□□□□ -1.96
NDRG3-201ENST00000349004 KRTAP9-9Q9BYP9 154 aa2.82□□□□□ -1.96
NDRG3-201ENST00000349004 KRTAP9-4Q9BYQ2 154 aa2.82□□□□□ -1.96
NDRG3-201ENST00000349004 SSPOA2VEC9 5147 aa2.81□□□□□ -1.96
NDRG3-201ENST00000349004 S4R3F8 94 aa2.8□□□□□ -1.96
NDRG3-201ENST00000349004 C10orf95Q9H7T3 257 aa2.79□□□□□ -1.96
NDRG3-201ENST00000349004 R4GN34 69 aa2.79□□□□□ -1.96
NDRG3-201ENST00000349004 KRTAP12-2P59991 146 aa2.78□□□□□ -1.96
NDRG3-201ENST00000349004 CRCT1Q9UGL9 99 aa2.78□□□□□ -1.96
NDRG3-201ENST00000349004 KRTAP4-7Q9BYR0 210 aa2.76□□□□□ -1.97
NDRG3-201ENST00000349004 KRTAP10-10P60014 251 aa2.75□□□□□ -1.97
NDRG3-201ENST00000349004 KRTAP9-8Q9BYQ0 159 aa2.75□□□□□ -1.97
NDRG3-201ENST00000349004 MT1FP04733 61 aa2.74□□□□□ -1.97
NDRG3-201ENST00000349004 SYNE2Q8WXH0 6885 aaKnown RBP2.74□□□□□ -1.97
NDRG3-201ENST00000349004 FCGBPQ9Y6R7 5405 aaPredicted RBP2.73□□□□□ -1.97
NDRG3-201ENST00000349004 KRTAP19-1Q8IUB9 90 aa2.73□□□□□ -1.97
NDRG3-201ENST00000349004 MT2AP02795 61 aa2.73□□□□□ -1.97
NDRG3-201ENST00000349004 PRO2289Q9P1D8 64 aa2.73□□□□□ -1.97
NDRG3-201ENST00000349004 LCE1DQ5T752 114 aa2.72□□□□□ -1.97
NDRG3-201ENST00000349004 KRTAP12-1P59990 96 aa2.72□□□□□ -1.97
NDRG3-201ENST00000349004 MACF1Q9UPN3 7388 aaKnown RBP2.71□□□□□ -1.98
NDRG3-201ENST00000349004 KRTAP4-9Q9BYQ8 210 aa2.67□□□□□ -1.98
NDRG3-201ENST00000349004 KRTAP9-3Q9BYQ3 159 aa2.65□□□□□ -1.99
NDRG3-201ENST00000349004 M0QZ58 72 aa2.64□□□□□ -1.99
NDRG3-201ENST00000349004 KMT2DO14686 5537 aa2.64□□□□□ -1.99
NDRG3-201ENST00000349004 KRTAP4-2Q9BYR5 136 aa2.61□□□□□ -1.99
NDRG3-201ENST00000349004 LCE4AQ5TA78 99 aa2.61□□□□□ -1.99
NDRG3-201ENST00000349004 MUC12Q9UKN1 5478 aa2.58□□□□□ -2
NDRG3-201ENST00000349004 KRTAP9-7A8MTY7 169 aa2.56□□□□□ -2
NDRG3-201ENST00000349004 KRTAP4-11Q9BYQ6 195 aa2.53□□□□□ -2
NDRG3-201ENST00000349004 MDN1Q9NU22 5596 aa2.53□□□□□ -2
NDRG3-201ENST00000349004 PLAC4Q8WY50 150 aa2.51□□□□□ -2.01
NDRG3-201ENST00000349004 MT1BP07438 61 aa2.48□□□□□ -2.01
NDRG3-201ENST00000349004 KRTAP19-6Q3LI70 58 aa2.47□□□□□ -2.01
NDRG3-201ENST00000349004 INE1O15225 51 aa2.46□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms