RNA–Protein interactions for RNA: ENST00000344979.7

PDE4A-202, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best) BASIC

Gene PDE4A, Length 2,579 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-202ENST00000344979 Q5VSD8 79 aa9.59□□□□□ -0.87
PDE4A-202ENST00000344979 H1FX-AS1Q4G0G2 97 aa9.58□□□□□ -0.88
PDE4A-202ENST00000344979 KRTAP10-8P60410 259 aa9.55□□□□□ -0.88
PDE4A-202ENST00000344979 RYR3Q15413 4870 aa9.55□□□□□ -0.88
PDE4A-202ENST00000344979 RYR1P21817 5038 aa9.49□□□□□ -0.89
PDE4A-202ENST00000344979 RPL37P61927 97 aaKnown RBP9.47□□□□□ -0.89
PDE4A-202ENST00000344979 XP32Q5T750 250 aa9.46□□□□□ -0.9
PDE4A-202ENST00000344979 KRTAP17-1Q9BYP8 105 aa9.41□□□□□ -0.9
PDE4A-202ENST00000344979 KIAA1109Q2LD37 5005 aa9.41□□□□□ -0.9
PDE4A-202ENST00000344979 KRTAP3-3Q9BYR6 98 aa9.39□□□□□ -0.91
PDE4A-202ENST00000344979 LPAP08519 4548 aa9.34□□□□□ -0.91
PDE4A-202ENST00000344979 S4R3F8 94 aa9.33□□□□□ -0.92
PDE4A-202ENST00000344979 K7ERS5 55 aa9.31□□□□□ -0.92
PDE4A-202ENST00000344979 KRTAP10-6P60371 365 aaPredicted RBP9.31□□□□□ -0.92
PDE4A-202ENST00000344979 A0A0D9SG42 100 aa9.28□□□□□ -0.92
PDE4A-202ENST00000344979 MT1HL1P0DM35 61 aa9.27□□□□□ -0.92
PDE4A-202ENST00000344979 LRP2P98164 4655 aa9.27□□□□□ -0.93
PDE4A-202ENST00000344979 KRTAP13-4Q3LI77 160 aa9.26□□□□□ -0.93
PDE4A-202ENST00000344979 CRIPTQ9P021 101 aa9.25□□□□□ -0.93
PDE4A-202ENST00000344979 KRTAP3-2Q9BYR7 98 aa9.24□□□□□ -0.93
PDE4A-202ENST00000344979 ROMO1P60602 79 aa9.23□□□□□ -0.93
PDE4A-202ENST00000344979 KRTAP25-1Q3LHN0 102 aa9.22□□□□□ -0.93
PDE4A-202ENST00000344979 EPPK1P58107 5090 aaKnown RBP9.2□□□□□ -0.94
PDE4A-202ENST00000344979 P0C880 135 aa9.19□□□□□ -0.94
PDE4A-202ENST00000344979 ABCA13Q86UQ4 5058 aa9.13□□□□□ -0.95
PDE4A-202ENST00000344979 TPRXLQ17RH7 258 aa9.04□□□□□ -0.96
PDE4A-202ENST00000344979 KRTAP12-2P59991 146 aa8.97□□□□□ -0.97
PDE4A-202ENST00000344979 SPINT4Q6UDR6 99 aa8.95□□□□□ -0.98
PDE4A-202ENST00000344979 KRTAP4-5Q9BYR2 181 aa8.95□□□□□ -0.98
PDE4A-202ENST00000344979 C10orf95Q9H7T3 257 aa8.87□□□□□ -0.99
PDE4A-202ENST00000344979 KRTAP12-1P59990 96 aa8.86□□□□□ -0.99
PDE4A-202ENST00000344979 M0QZ58 72 aa8.81□□□□□ -1
PDE4A-202ENST00000344979 MUC17Q685J3 4493 aa8.78□□□□□ -1
PDE4A-202ENST00000344979 SEC61BP60468 96 aaKnown RBP8.73□□□□□ -1.01
PDE4A-202ENST00000344979 HERC2O95714 4834 aa8.71□□□□□ -1.02
PDE4A-202ENST00000344979 R4GN34 69 aa8.7□□□□□ -1.02
PDE4A-202ENST00000344979 J3QL48 77 aa8.69□□□□□ -1.02
PDE4A-202ENST00000344979 KRTAP4-1Q9BYQ7 146 aa8.67□□□□□ -1.02
PDE4A-202ENST00000344979 NDUFAF8A1L188 74 aa8.64□□□□□ -1.03
PDE4A-202ENST00000344979 MUC2Q02817 5179 aa8.62□□□□□ -1.03
PDE4A-202ENST00000344979 LORP23490 312 aaPredicted RBP8.61□□□□□ -1.03
PDE4A-202ENST00000344979 KRTAP15-1Q3LI76 137 aa8.56□□□□□ -1.04
PDE4A-202ENST00000344979 KRTAP19-2Q3LHN2 52 aa8.43□□□□□ -1.06
PDE4A-202ENST00000344979 HERC1Q15751 4861 aa8.38□□□□□ -1.07
PDE4A-202ENST00000344979 FLGP20930 4061 aaPredicted RBP8.36□□□□□ -1.07
PDE4A-202ENST00000344979 BIRC6Q9NR09 4857 aa8.35□□□□□ -1.07
PDE4A-202ENST00000344979 A0A0A0MQY5 61 aa8.34□□□□□ -1.07
PDE4A-202ENST00000344979 CAMK2N1Q7Z7J9 78 aa8.28□□□□□ -1.08
PDE4A-202ENST00000344979 PCLOQ9Y6V0 5065 aa8.24□□□□□ -1.09
PDE4A-202ENST00000344979 HMCN2Q8NDA2 5059 aa8.2□□□□□ -1.1
PDE4A-202ENST00000344979 FAT4Q6V0I7 4981 aa8.18□□□□□ -1.1
PDE4A-202ENST00000344979 PLAC4Q8WY50 150 aa8.07□□□□□ -1.12
PDE4A-202ENST00000344979 LUZP6Q538Z0 58 aa8.06□□□□□ -1.12
PDE4A-202ENST00000344979 RNF213Q63HN8 5207 aa7.99□□□□□ -1.13
PDE4A-202ENST00000344979 PP632Q6XCG6 107 aa7.98□□□□□ -1.13
PDE4A-202ENST00000344979 LCE2CQ5TA81 110 aa7.96□□□□□ -1.14
PDE4A-202ENST00000344979 M0R2T5 61 aa7.93□□□□□ -1.14
PDE4A-202ENST00000344979 UBR4Q5T4S7 5183 aa7.92□□□□□ -1.14
PDE4A-202ENST00000344979 TNP1P09430 55 aa7.9□□□□□ -1.14
PDE4A-202ENST00000344979 KRTAP19-1Q8IUB9 90 aa7.78□□□□□ -1.16
PDE4A-202ENST00000344979 SPRR2GQ9BYE4 73 aa7.78□□□□□ -1.16
PDE4A-202ENST00000344979 MT1HP80294 61 aa7.76□□□□□ -1.17
PDE4A-202ENST00000344979 KRTAP10-10P60014 251 aa7.7□□□□□ -1.18
PDE4A-202ENST00000344979 MT1FP04733 61 aa7.67□□□□□ -1.18
PDE4A-202ENST00000344979 MT2AP02795 61 aa7.65□□□□□ -1.18
PDE4A-202ENST00000344979 KRTAP23-1A1A580 65 aa7.65□□□□□ -1.19
PDE4A-202ENST00000344979 KRTAP9-8Q9BYQ0 159 aa7.58□□□□□ -1.2
PDE4A-202ENST00000344979 LCE3AQ5TA76 89 aa7.52□□□□□ -1.21
PDE4A-202ENST00000344979 KRTAP19-8Q3LI54 63 aa7.41□□□□□ -1.22
PDE4A-202ENST00000344979 SPRR5A0A1B0GTR4 108 aa7.41□□□□□ -1.22
PDE4A-202ENST00000344979 MT1BP07438 61 aa7.38□□□□□ -1.23
PDE4A-202ENST00000344979 KRTAP10-5P60370 271 aa7.34□□□□□ -1.23
PDE4A-202ENST00000344979 MT1XP80297 61 aa7.33□□□□□ -1.24
PDE4A-202ENST00000344979 KRTAP9-3Q9BYQ3 159 aa7.24□□□□□ -1.25
PDE4A-202ENST00000344979 KRTAP8-1Q8IUC2 63 aa7.24□□□□□ -1.25
PDE4A-202ENST00000344979 KRTAP10-12P60413 245 aa7.21□□□□□ -1.25
PDE4A-202ENST00000344979 KRTAP10-7P60409 375 aaPredicted RBP7.18□□□□□ -1.26
PDE4A-202ENST00000344979 KRTAP12-3P60328 96 aa7.14□□□□□ -1.27
PDE4A-202ENST00000344979 USH2AO75445 5202 aa7.12□□□□□ -1.27
PDE4A-202ENST00000344979 PRO2289Q9P1D8 64 aa7.08□□□□□ -1.28
PDE4A-202ENST00000344979 KMT2DO14686 5537 aa7.01□□□□□ -1.29
PDE4A-202ENST00000344979 LCE2BO14633 110 aa7□□□□□ -1.29
PDE4A-202ENST00000344979 KRTAP19-5Q3LI72 72 aa6.87□□□□□ -1.31
PDE4A-202ENST00000344979 INE1O15225 51 aa6.86□□□□□ -1.31
PDE4A-202ENST00000344979 LCE2AQ5TA79 106 aaPredicted RBP6.79□□□□□ -1.32
PDE4A-202ENST00000344979 KRTAP4-8A0A0G2JLE6 195 aa6.77□□□□□ -1.33
PDE4A-202ENST00000344979 KRTAP4-8Q9BYQ9 185 aa6.77□□□□□ -1.33
PDE4A-202ENST00000344979 LCE3CQ5T5A8 94 aa6.7□□□□□ -1.34
PDE4A-202ENST00000344979 KRTAP19-7Q3SYF9 63 aa6.53□□□□□ -1.36
PDE4A-202ENST00000344979 FSIP2Q5CZC0 6907 aa6.52□□□□□ -1.37
PDE4A-202ENST00000344979 SSPOA2VEC9 5147 aa6.51□□□□□ -1.37
PDE4A-202ENST00000344979 KRTAP4-7Q9BYR0 210 aa6.5□□□□□ -1.37
PDE4A-202ENST00000344979 KRTAP9-6A8MVA2 160 aa6.5□□□□□ -1.37
PDE4A-202ENST00000344979 MT1EP04732 61 aa6.34□□□□□ -1.39
PDE4A-202ENST00000344979 MT1LQ93083 61 aa6.34□□□□□ -1.39
PDE4A-202ENST00000344979 KRTAP19-6Q3LI70 58 aa6.2□□□□□ -1.42
PDE4A-202ENST00000344979 FCGBPQ9Y6R7 5405 aaPredicted RBP6.19□□□□□ -1.42
PDE4A-202ENST00000344979 MUC12Q9UKN1 5478 aa6.18□□□□□ -1.42
PDE4A-202ENST00000344979 KRTAP2-3P0C7H8 128 aa6.17□□□□□ -1.42
PDE4A-202ENST00000344979 KRTAP2-4Q9BYR9 128 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms