RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 H0Y9P7 68 aa8.53□□□□□ -1.04
USF2-202ENST00000343550 SYNE2Q8WXH0 6885 aaKnown RBP8.53□□□□□ -1.04
USF2-202ENST00000343550 SMIM20Q8N5G0 67 aa8.52□□□□□ -1.05
USF2-202ENST00000343550 SERP2Q8N6R1 65 aa8.5□□□□□ -1.05
USF2-202ENST00000343550 COX7CP15954 63 aa8.49□□□□□ -1.05
USF2-202ENST00000343550 KRTAP19-6Q3LI70 58 aa8.49□□□□□ -1.05
USF2-202ENST00000343550 OCR1Q9BZK8 76 aa8.49□□□□□ -1.05
USF2-202ENST00000343550 CCDC179H3BU77 68 aa8.47□□□□□ -1.05
USF2-202ENST00000343550 S4R3F8 94 aa8.46□□□□□ -1.05
USF2-202ENST00000343550 TRAV7A0A075B6U4 112 aa8.45□□□□□ -1.06
USF2-202ENST00000343550 C5orf47Q569G3 176 aa8.44□□□□□ -1.06
USF2-202ENST00000343550 LCA10Q71F78 164 aa8.44□□□□□ -1.06
USF2-202ENST00000343550 LINC00208Q96KT6 92 aa8.43□□□□□ -1.06
USF2-202ENST00000343550 CSAG1Q6PB30 78 aa8.4□□□□□ -1.06
USF2-202ENST00000343550 MP68P56378 58 aa8.39□□□□□ -1.07
USF2-202ENST00000343550 KLKP1Q107X0 134 aa8.37□□□□□ -1.07
USF2-202ENST00000343550 H3BS24 57 aa8.35□□□□□ -1.07
USF2-202ENST00000343550 H3BPC8 53 aa8.31□□□□□ -1.08
USF2-202ENST00000343550 C20orf197Q8N268 126 aa8.29□□□□□ -1.08
USF2-202ENST00000343550 A8MUN3 132 aa8.27□□□□□ -1.09
USF2-202ENST00000343550 KRTAP6-3Q3LI67 103 aa8.23□□□□□ -1.09
USF2-202ENST00000343550 NDUFC1O43677 76 aa8.22□□□□□ -1.09
USF2-202ENST00000343550 CYSTM1Q9H1C7 97 aa8.22□□□□□ -1.09
USF2-202ENST00000343550 TMEM258P61165 79 aa8.2□□□□□ -1.1
USF2-202ENST00000343550 SNURFQ9Y675 71 aa8.2□□□□□ -1.1
USF2-202ENST00000343550 H7BZZ5 65 aa8.17□□□□□ -1.1
USF2-202ENST00000343550 DMAC1Q96GE9 116 aa8.12□□□□□ -1.11
USF2-202ENST00000343550 SVIPQ8NHG7 77 aa8.11□□□□□ -1.11
USF2-202ENST00000343550 SPRR2GQ9BYE4 73 aa8.1□□□□□ -1.11
USF2-202ENST00000343550 H0YAA0 97 aa8.08□□□□□ -1.12
USF2-202ENST00000343550 ATP5EP56381 51 aaPredicted RBP8.08□□□□□ -1.12
USF2-202ENST00000343550 CRIPTQ9P021 101 aa8.03□□□□□ -1.12
USF2-202ENST00000343550 A6NN06 94 aa8.03□□□□□ -1.12
USF2-202ENST00000343550 MT1BP07438 61 aa8.02□□□□□ -1.13
USF2-202ENST00000343550 KRTAP19-8Q3LI54 63 aa8.02□□□□□ -1.13
USF2-202ENST00000343550 ADM2Q7Z4H4 148 aa8.01□□□□□ -1.13
USF2-202ENST00000343550 NEBP20929 6669 aa8□□□□□ -1.13
USF2-202ENST00000343550 RPS28P62857 69 aaKnown RBP8□□□□□ -1.13
USF2-202ENST00000343550 Q5VV11 94 aa7.99□□□□□ -1.13
USF2-202ENST00000343550 ACYP2P14621 99 aa7.98□□□□□ -1.13
USF2-202ENST00000343550 SPANXA2-OT1Q8N9U9 137 aa7.96□□□□□ -1.14
USF2-202ENST00000343550 SERP1Q9Y6X1 66 aa7.94□□□□□ -1.14
USF2-202ENST00000343550 KRTAP10-5P60370 271 aa7.88□□□□□ -1.15
USF2-202ENST00000343550 MUC12Q9UKN1 5478 aa7.87□□□□□ -1.15
USF2-202ENST00000343550 P0C880 135 aa7.86□□□□□ -1.15
USF2-202ENST00000343550 SPTSSBQ8NFR3 76 aa7.81□□□□□ -1.16
USF2-202ENST00000343550 CHKB-CPT1BH3BT56 60 aa7.8□□□□□ -1.16
USF2-202ENST00000343550 LOC100996750A0A140TA64 210 aa7.78□□□□□ -1.16
USF2-202ENST00000343550 KRTAP4-6Q9BYQ5 205 aa7.78□□□□□ -1.16
USF2-202ENST00000343550 R4GN34 69 aa7.78□□□□□ -1.16
USF2-202ENST00000343550 SMIM26A0A096LP01 95 aa7.76□□□□□ -1.17
USF2-202ENST00000343550 KRTAP5-9P26371 169 aa7.75□□□□□ -1.17
USF2-202ENST00000343550 M0QZ58 72 aa7.72□□□□□ -1.17
USF2-202ENST00000343550 KRTAP20-1Q3LI63 56 aa7.72□□□□□ -1.17
USF2-202ENST00000343550 COA5Q86WW8 74 aa7.68□□□□□ -1.18
USF2-202ENST00000343550 KMT2DO14686 5537 aa7.66□□□□□ -1.18
USF2-202ENST00000343550 PLAC4Q8WY50 150 aa7.64□□□□□ -1.19
USF2-202ENST00000343550 MDN1Q9NU22 5596 aa7.63□□□□□ -1.19
USF2-202ENST00000343550 LINC01554Q52M75 96 aa7.6□□□□□ -1.19
USF2-202ENST00000343550 Q1T7F1 81 aa7.57□□□□□ -1.2
USF2-202ENST00000343550 V9GYY9 64 aa7.57□□□□□ -1.2
USF2-202ENST00000343550 MT1XP80297 61 aa7.55□□□□□ -1.2
USF2-202ENST00000343550 PRO2289Q9P1D8 64 aa7.53□□□□□ -1.2
USF2-202ENST00000343550 KRTAP2-3P0C7H8 128 aa7.47□□□□□ -1.21
USF2-202ENST00000343550 SPRR2FQ96RM1 72 aa7.47□□□□□ -1.21
USF2-202ENST00000343550 KRTAP2-4Q9BYR9 128 aa7.47□□□□□ -1.21
USF2-202ENST00000343550 LINC01558Q9Y6Z2 57 aa7.45□□□□□ -1.22
USF2-202ENST00000343550 KRTAP13-4Q3LI77 160 aa7.43□□□□□ -1.22
USF2-202ENST00000343550 SPRR2EP22531 72 aa7.42□□□□□ -1.22
USF2-202ENST00000343550 SPRR2BP35325 72 aa7.42□□□□□ -1.22
USF2-202ENST00000343550 SPRR2AP35326 72 aa7.42□□□□□ -1.22
USF2-202ENST00000343550 SEC61GP60059 68 aa7.41□□□□□ -1.22
USF2-202ENST00000343550 PSPHP1O15172 72 aa7.37□□□□□ -1.23
USF2-202ENST00000343550 KRTAP8-1Q8IUC2 63 aa7.37□□□□□ -1.23
USF2-202ENST00000343550 PRR15LQ9BU68 103 aa7.37□□□□□ -1.23
USF2-202ENST00000343550 PRO0628Q9UI54 55 aa7.36□□□□□ -1.23
USF2-202ENST00000343550 KRTAP12-2P59991 146 aa7.32□□□□□ -1.24
USF2-202ENST00000343550 A0A1B0GU33 70 aa7.29□□□□□ -1.24
USF2-202ENST00000343550 LCE1AQ5T7P2 110 aa7.29□□□□□ -1.24
USF2-202ENST00000343550 A0A1B0GU69 56 aa7.27□□□□□ -1.25
USF2-202ENST00000343550 SPATA8Q6RVD6 105 aa7.26□□□□□ -1.25
USF2-202ENST00000343550 KRTAP4-8A0A0G2JLE6 195 aa7.22□□□□□ -1.25
USF2-202ENST00000343550 KRTAP19-4Q3LI73 84 aa7.22□□□□□ -1.25
USF2-202ENST00000343550 KRTAP4-8Q9BYQ9 185 aa7.22□□□□□ -1.25
USF2-202ENST00000343550 KRTAP2-2Q9BYT5 123 aa7.22□□□□□ -1.25
USF2-202ENST00000343550 KRTAP2-1Q9BYU5 128 aa7.22□□□□□ -1.25
USF2-202ENST00000343550 A0A0D9SG42 100 aa7.21□□□□□ -1.26
USF2-202ENST00000343550 KRTAP10-7P60409 375 aaPredicted RBP7.21□□□□□ -1.26
USF2-202ENST00000343550 BRK1Q8WUW1 75 aa7.18□□□□□ -1.26
USF2-202ENST00000343550 A6NED7 52 aa7.17□□□□□ -1.26
USF2-202ENST00000343550 KRTAP10-12P60413 245 aa7.17□□□□□ -1.26
USF2-202ENST00000343550 CAMK2N1Q7Z7J9 78 aa7.17□□□□□ -1.26
USF2-202ENST00000343550 SPRR2DP22532 72 aa7.17□□□□□ -1.26
USF2-202ENST00000343550 SPINT4Q6UDR6 99 aa7.1□□□□□ -1.27
USF2-202ENST00000343550 CDC42SE1Q9NRR8 79 aa7.1□□□□□ -1.27
USF2-202ENST00000343550 UQCR11O14957 56 aa7.09□□□□□ -1.27
USF2-202ENST00000343550 KRTAP12-1P59990 96 aa7.09□□□□□ -1.27
USF2-202ENST00000343550 A8MU10 97 aa7.02□□□□□ -1.29
USF2-202ENST00000343550 MIR22HGQ0VDD5 57 aa7.01□□□□□ -1.29
USF2-202ENST00000343550 KRTAP23-1A1A580 65 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms