RNA–Protein interactions for RNA: ENST00000341990.8

CNTNAP3B-202, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-202ENST00000341990 KRTAP10-8P60410 259 aa10.29□□□□□ -0.76
CNTNAP3B-202ENST00000341990 KRTAP3-3Q9BYR6 98 aa10.28□□□□□ -0.76
CNTNAP3B-202ENST00000341990 Q5VSD8 79 aa10.24□□□□□ -0.77
CNTNAP3B-202ENST00000341990 RPL37P61927 97 aaKnown RBP10.23□□□□□ -0.77
CNTNAP3B-202ENST00000341990 XP32Q5T750 250 aa10.22□□□□□ -0.77
CNTNAP3B-202ENST00000341990 KRTAP10-6P60371 365 aaPredicted RBP10.22□□□□□ -0.77
CNTNAP3B-202ENST00000341990 KRTAP13-4Q3LI77 160 aa10.18□□□□□ -0.78
CNTNAP3B-202ENST00000341990 KRTAP17-1Q9BYP8 105 aa10.18□□□□□ -0.78
CNTNAP3B-202ENST00000341990 CRIPTQ9P021 101 aa10.18□□□□□ -0.78
CNTNAP3B-202ENST00000341990 KRTAP25-1Q3LHN0 102 aa10.17□□□□□ -0.78
CNTNAP3B-202ENST00000341990 RYR3Q15413 4870 aa10.15□□□□□ -0.78
CNTNAP3B-202ENST00000341990 KRTAP3-2Q9BYR7 98 aa10.14□□□□□ -0.79
CNTNAP3B-202ENST00000341990 RYR1P21817 5038 aa10.14□□□□□ -0.79
CNTNAP3B-202ENST00000341990 K7ERS5 55 aa10.12□□□□□ -0.79
CNTNAP3B-202ENST00000341990 LPAP08519 4548 aa10.12□□□□□ -0.79
CNTNAP3B-202ENST00000341990 A0A0D9SG42 100 aa10.12□□□□□ -0.79
CNTNAP3B-202ENST00000341990 S4R3F8 94 aa10.11□□□□□ -0.79
CNTNAP3B-202ENST00000341990 KIAA1109Q2LD37 5005 aa10.09□□□□□ -0.79
CNTNAP3B-202ENST00000341990 P0C880 135 aa10.05□□□□□ -0.8
CNTNAP3B-202ENST00000341990 LRP2P98164 4655 aa10.01□□□□□ -0.81
CNTNAP3B-202ENST00000341990 MT1HL1P0DM35 61 aa10□□□□□ -0.81
CNTNAP3B-202ENST00000341990 ROMO1P60602 79 aa9.97□□□□□ -0.81
CNTNAP3B-202ENST00000341990 KRTAP12-2P59991 146 aa9.84□□□□□ -0.83
CNTNAP3B-202ENST00000341990 ABCA13Q86UQ4 5058 aa9.82□□□□□ -0.84
CNTNAP3B-202ENST00000341990 TPRXLQ17RH7 258 aa9.8□□□□□ -0.84
CNTNAP3B-202ENST00000341990 EPPK1P58107 5090 aaKnown RBP9.79□□□□□ -0.84
CNTNAP3B-202ENST00000341990 C10orf95Q9H7T3 257 aa9.78□□□□□ -0.84
CNTNAP3B-202ENST00000341990 H3BS24 57 aa9.77□□□□□ -0.85
CNTNAP3B-202ENST00000341990 SPINT4Q6UDR6 99 aa9.73□□□□□ -0.85
CNTNAP3B-202ENST00000341990 KRTAP12-1P59990 96 aa9.72□□□□□ -0.85
CNTNAP3B-202ENST00000341990 KRTAP4-5Q9BYR2 181 aa9.59□□□□□ -0.87
CNTNAP3B-202ENST00000341990 M0QZ58 72 aa9.57□□□□□ -0.88
CNTNAP3B-202ENST00000341990 MUC17Q685J3 4493 aa9.46□□□□□ -0.9
CNTNAP3B-202ENST00000341990 R4GN34 69 aa9.41□□□□□ -0.9
CNTNAP3B-202ENST00000341990 LORP23490 312 aaPredicted RBP9.4□□□□□ -0.9
CNTNAP3B-202ENST00000341990 KRTAP4-1Q9BYQ7 146 aa9.4□□□□□ -0.9
CNTNAP3B-202ENST00000341990 SEC61BP60468 96 aaKnown RBP9.33□□□□□ -0.92
CNTNAP3B-202ENST00000341990 KRTAP15-1Q3LI76 137 aa9.31□□□□□ -0.92
CNTNAP3B-202ENST00000341990 MUC2Q02817 5179 aa9.29□□□□□ -0.92
CNTNAP3B-202ENST00000341990 HERC2O95714 4834 aa9.25□□□□□ -0.93
CNTNAP3B-202ENST00000341990 KRTAP19-2Q3LHN2 52 aa9.19□□□□□ -0.94
CNTNAP3B-202ENST00000341990 J3QL48 77 aa9.18□□□□□ -0.94
CNTNAP3B-202ENST00000341990 NDUFAF8A1L188 74 aa9.16□□□□□ -0.94
CNTNAP3B-202ENST00000341990 FLGP20930 4061 aaPredicted RBP9□□□□□ -0.97
CNTNAP3B-202ENST00000341990 CAMK2N1Q7Z7J9 78 aa8.95□□□□□ -0.98
CNTNAP3B-202ENST00000341990 BIRC6Q9NR09 4857 aa8.91□□□□□ -0.98
CNTNAP3B-202ENST00000341990 PCLOQ9Y6V0 5065 aa8.91□□□□□ -0.98
CNTNAP3B-202ENST00000341990 HERC1Q15751 4861 aa8.9□□□□□ -0.98
CNTNAP3B-202ENST00000341990 PLAC4Q8WY50 150 aa8.87□□□□□ -0.99
CNTNAP3B-202ENST00000341990 FAT4Q6V0I7 4981 aa8.81□□□□□ -1
CNTNAP3B-202ENST00000341990 HMCN2Q8NDA2 5059 aa8.73□□□□□ -1.01
CNTNAP3B-202ENST00000341990 PP632Q6XCG6 107 aa8.71□□□□□ -1.02
CNTNAP3B-202ENST00000341990 LCE2CQ5TA81 110 aa8.61□□□□□ -1.03
CNTNAP3B-202ENST00000341990 TNP1P09430 55 aa8.57□□□□□ -1.04
CNTNAP3B-202ENST00000341990 RNF213Q63HN8 5207 aa8.55□□□□□ -1.04
CNTNAP3B-202ENST00000341990 KRTAP19-1Q8IUB9 90 aa8.47□□□□□ -1.05
CNTNAP3B-202ENST00000341990 UBR4Q5T4S7 5183 aa8.46□□□□□ -1.05
CNTNAP3B-202ENST00000341990 SPRR2GQ9BYE4 73 aa8.44□□□□□ -1.06
CNTNAP3B-202ENST00000341990 LUZP6Q538Z0 58 aa8.43□□□□□ -1.06
CNTNAP3B-202ENST00000341990 M0R2T5 61 aa8.41□□□□□ -1.06
CNTNAP3B-202ENST00000341990 KRTAP23-1A1A580 65 aa8.36□□□□□ -1.07
CNTNAP3B-202ENST00000341990 MT1HP80294 61 aa8.35□□□□□ -1.07
CNTNAP3B-202ENST00000341990 MT1FP04733 61 aa8.29□□□□□ -1.08
CNTNAP3B-202ENST00000341990 MT2AP02795 61 aa8.25□□□□□ -1.09
CNTNAP3B-202ENST00000341990 KRTAP10-10P60014 251 aa8.25□□□□□ -1.09
CNTNAP3B-202ENST00000341990 SPRR5A0A1B0GTR4 108 aa8.22□□□□□ -1.09
CNTNAP3B-202ENST00000341990 LCE3AQ5TA76 89 aa8.2□□□□□ -1.1
CNTNAP3B-202ENST00000341990 KRTAP9-8Q9BYQ0 159 aa8.18□□□□□ -1.1
CNTNAP3B-202ENST00000341990 A0A0A0MQY5 61 aa8.17□□□□□ -1.1
CNTNAP3B-202ENST00000341990 KRTAP19-8Q3LI54 63 aa8.03□□□□□ -1.12
CNTNAP3B-202ENST00000341990 MT1BP07438 61 aa8□□□□□ -1.13
CNTNAP3B-202ENST00000341990 KRTAP10-5P60370 271 aa7.99□□□□□ -1.13
CNTNAP3B-202ENST00000341990 MT1XP80297 61 aa7.97□□□□□ -1.13
CNTNAP3B-202ENST00000341990 KRTAP8-1Q8IUC2 63 aa7.92□□□□□ -1.14
CNTNAP3B-202ENST00000341990 KRTAP9-3Q9BYQ3 159 aa7.82□□□□□ -1.16
CNTNAP3B-202ENST00000341990 KRTAP10-12P60413 245 aa7.81□□□□□ -1.16
CNTNAP3B-202ENST00000341990 KRTAP10-7P60409 375 aaPredicted RBP7.8□□□□□ -1.16
CNTNAP3B-202ENST00000341990 KRTAP12-3P60328 96 aa7.77□□□□□ -1.17
CNTNAP3B-202ENST00000341990 USH2AO75445 5202 aa7.67□□□□□ -1.18
CNTNAP3B-202ENST00000341990 KMT2DO14686 5537 aa7.58□□□□□ -1.2
CNTNAP3B-202ENST00000341990 LCE2BO14633 110 aa7.55□□□□□ -1.2
CNTNAP3B-202ENST00000341990 PRO2289Q9P1D8 64 aa7.55□□□□□ -1.2
CNTNAP3B-202ENST00000341990 KRTAP19-5Q3LI72 72 aa7.46□□□□□ -1.21
CNTNAP3B-202ENST00000341990 KRTAP4-8A0A0G2JLE6 195 aa7.35□□□□□ -1.23
CNTNAP3B-202ENST00000341990 KRTAP4-8Q9BYQ9 185 aa7.35□□□□□ -1.23
CNTNAP3B-202ENST00000341990 LCE3CQ5T5A8 94 aa7.31□□□□□ -1.24
CNTNAP3B-202ENST00000341990 LCE2AQ5TA79 106 aaPredicted RBP7.26□□□□□ -1.25
CNTNAP3B-202ENST00000341990 INE1O15225 51 aa7.2□□□□□ -1.26
CNTNAP3B-202ENST00000341990 KRTAP9-6A8MVA2 160 aa7.16□□□□□ -1.26
CNTNAP3B-202ENST00000341990 KRTAP19-7Q3SYF9 63 aa7.11□□□□□ -1.27
CNTNAP3B-202ENST00000341990 KRTAP4-7Q9BYR0 210 aa7.1□□□□□ -1.27
CNTNAP3B-202ENST00000341990 SSPOA2VEC9 5147 aa6.96□□□□□ -1.3
CNTNAP3B-202ENST00000341990 FSIP2Q5CZC0 6907 aa6.95□□□□□ -1.3
CNTNAP3B-202ENST00000341990 MT1LQ93083 61 aa6.89□□□□□ -1.31
CNTNAP3B-202ENST00000341990 MT1EP04732 61 aa6.87□□□□□ -1.31
CNTNAP3B-202ENST00000341990 KRTAP2-3P0C7H8 128 aa6.82□□□□□ -1.32
CNTNAP3B-202ENST00000341990 KRTAP2-4Q9BYR9 128 aa6.82□□□□□ -1.32
CNTNAP3B-202ENST00000341990 KRTAP2-1Q9BYU5 128 aa6.82□□□□□ -1.32
CNTNAP3B-202ENST00000341990 FCGBPQ9Y6R7 5405 aaPredicted RBP6.67□□□□□ -1.34
CNTNAP3B-202ENST00000341990 KRTAP19-4Q3LI73 84 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms