RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 LOC101927531A0A1B0GV80 90 aa7.52□□□□□ -1.21
BRCC3-202ENST00000340647 A6NN06 94 aa7.52□□□□□ -1.21
BRCC3-202ENST00000340647 KRTAP10-5P60370 271 aa7.51□□□□□ -1.21
BRCC3-202ENST00000340647 KRTAP20-1Q3LI63 56 aa7.51□□□□□ -1.21
BRCC3-202ENST00000340647 ATP5EP2Q5VTU8 51 aa7.48□□□□□ -1.21
BRCC3-202ENST00000340647 UQCRQO14949 82 aa7.47□□□□□ -1.21
BRCC3-202ENST00000340647 HIST1H4AP62805 103 aaKnown RBP7.47□□□□□ -1.21
BRCC3-202ENST00000340647 H0Y9P7 68 aa7.46□□□□□ -1.22
BRCC3-202ENST00000340647 MDN1Q9NU22 5596 aa7.42□□□□□ -1.22
BRCC3-202ENST00000340647 LINC00643Q86TS7 51 aa7.39□□□□□ -1.23
BRCC3-202ENST00000340647 CRIPTQ9P021 101 aa7.39□□□□□ -1.23
BRCC3-202ENST00000340647 KMT2DO14686 5537 aa7.39□□□□□ -1.23
BRCC3-202ENST00000340647 H0YAA0 97 aa7.38□□□□□ -1.23
BRCC3-202ENST00000340647 ATOX1O00244 68 aa7.38□□□□□ -1.23
BRCC3-202ENST00000340647 KRTAP5-9P26371 169 aa7.37□□□□□ -1.23
BRCC3-202ENST00000340647 OCR1Q9BZK8 76 aa7.37□□□□□ -1.23
BRCC3-202ENST00000340647 IMUPQ9GZP8 106 aa7.37□□□□□ -1.23
BRCC3-202ENST00000340647 NDUFC1O43677 76 aa7.34□□□□□ -1.23
BRCC3-202ENST00000340647 LINC00208Q96KT6 92 aa7.34□□□□□ -1.23
BRCC3-202ENST00000340647 A0A1B0GV90 55 aa7.33□□□□□ -1.24
BRCC3-202ENST00000340647 A8MUN3 132 aa7.3□□□□□ -1.24
BRCC3-202ENST00000340647 ADM2Q7Z4H4 148 aa7.29□□□□□ -1.24
BRCC3-202ENST00000340647 MT1XP80297 61 aa7.21□□□□□ -1.26
BRCC3-202ENST00000340647 MP68P56378 58 aa7.2□□□□□ -1.26
BRCC3-202ENST00000340647 KRTAP2-3P0C7H8 128 aa7.19□□□□□ -1.26
BRCC3-202ENST00000340647 P0C880 135 aa7.19□□□□□ -1.26
BRCC3-202ENST00000340647 KRTAP2-4Q9BYR9 128 aa7.19□□□□□ -1.26
BRCC3-202ENST00000340647 DMAC1Q96GE9 116 aa7.14□□□□□ -1.27
BRCC3-202ENST00000340647 H3BPC8 53 aa7.12□□□□□ -1.27
BRCC3-202ENST00000340647 R4GN34 69 aa7.04□□□□□ -1.28
BRCC3-202ENST00000340647 J3QR89 54 aa7.03□□□□□ -1.28
BRCC3-202ENST00000340647 PRO2289Q9P1D8 64 aa7.03□□□□□ -1.28
BRCC3-202ENST00000340647 M0QZ58 72 aa7.02□□□□□ -1.29
BRCC3-202ENST00000340647 SPRR2EP22531 72 aa7.02□□□□□ -1.29
BRCC3-202ENST00000340647 SPRR2BP35325 72 aa7.02□□□□□ -1.29
BRCC3-202ENST00000340647 SPRR2AP35326 72 aa7.02□□□□□ -1.29
BRCC3-202ENST00000340647 PLAC4Q8WY50 150 aa7.02□□□□□ -1.29
BRCC3-202ENST00000340647 SPRR2FQ96RM1 72 aa7.02□□□□□ -1.29
BRCC3-202ENST00000340647 SCGB1A1P11684 91 aa7.01□□□□□ -1.29
BRCC3-202ENST00000340647 KRTAP12-2P59991 146 aa7□□□□□ -1.29
BRCC3-202ENST00000340647 KRTAP4-8A0A0G2JLE6 195 aa6.96□□□□□ -1.3
BRCC3-202ENST00000340647 MT-ATP8P03928 68 aa6.96□□□□□ -1.3
BRCC3-202ENST00000340647 C20orf197Q8N268 126 aa6.96□□□□□ -1.3
BRCC3-202ENST00000340647 KRTAP4-8Q9BYQ9 185 aa6.96□□□□□ -1.3
BRCC3-202ENST00000340647 KRTAP2-2Q9BYT5 123 aa6.94□□□□□ -1.3
BRCC3-202ENST00000340647 KRTAP2-1Q9BYU5 128 aa6.94□□□□□ -1.3
BRCC3-202ENST00000340647 TRAV7A0A075B6U4 112 aa6.93□□□□□ -1.3
BRCC3-202ENST00000340647 KRTAP8-1Q8IUC2 63 aa6.92□□□□□ -1.3
BRCC3-202ENST00000340647 LCE1AQ5T7P2 110 aa6.91□□□□□ -1.3
BRCC3-202ENST00000340647 LINC01554Q52M75 96 aa6.9□□□□□ -1.3
BRCC3-202ENST00000340647 KRTAP10-7P60409 375 aaPredicted RBP6.89□□□□□ -1.31
BRCC3-202ENST00000340647 ACYP2P14621 99 aa6.88□□□□□ -1.31
BRCC3-202ENST00000340647 LOC100996750A0A140TA64 210 aa6.86□□□□□ -1.31
BRCC3-202ENST00000340647 KRTAP4-6Q9BYQ5 205 aa6.86□□□□□ -1.31
BRCC3-202ENST00000340647 KRTAP10-12P60413 245 aa6.83□□□□□ -1.32
BRCC3-202ENST00000340647 SMIM20Q8N5G0 67 aa6.8□□□□□ -1.32
BRCC3-202ENST00000340647 SNURFQ9Y675 71 aa6.79□□□□□ -1.32
BRCC3-202ENST00000340647 SPRR2DP22532 72 aa6.78□□□□□ -1.32
BRCC3-202ENST00000340647 K7ERU9 68 aa6.76□□□□□ -1.33
BRCC3-202ENST00000340647 KRTAP13-4Q3LI77 160 aa6.73□□□□□ -1.33
BRCC3-202ENST00000340647 SPTSSBQ8NFR3 76 aa6.72□□□□□ -1.33
BRCC3-202ENST00000340647 CHKB-CPT1BH3BT56 60 aa6.68□□□□□ -1.34
BRCC3-202ENST00000340647 SPANXA2-OT1Q8N9U9 137 aa6.68□□□□□ -1.34
BRCC3-202ENST00000340647 LCE3BQ5TA77 95 aa6.65□□□□□ -1.34
BRCC3-202ENST00000340647 SERP2Q8N6R1 65 aa6.61□□□□□ -1.35
BRCC3-202ENST00000340647 GPR98Q8WXG9 6306 aa6.57□□□□□ -1.36
BRCC3-202ENST00000340647 COA5Q86WW8 74 aa6.51□□□□□ -1.37
BRCC3-202ENST00000340647 KRTAP19-7Q3SYF9 63 aa6.47□□□□□ -1.37
BRCC3-202ENST00000340647 CYSTM1Q9H1C7 97 aa6.46□□□□□ -1.38
BRCC3-202ENST00000340647 CAMK2N1Q7Z7J9 78 aa6.43□□□□□ -1.38
BRCC3-202ENST00000340647 SPATA8Q6RVD6 105 aa6.4□□□□□ -1.38
BRCC3-202ENST00000340647 DSTQ03001 7570 aaKnown RBP6.39□□□□□ -1.39
BRCC3-202ENST00000340647 COX7CP15954 63 aa6.39□□□□□ -1.39
BRCC3-202ENST00000340647 A0A0D9SG42 100 aa6.38□□□□□ -1.39
BRCC3-202ENST00000340647 MT1EP04732 61 aa6.38□□□□□ -1.39
BRCC3-202ENST00000340647 LCE5AQ5TCM9 118 aa6.38□□□□□ -1.39
BRCC3-202ENST00000340647 H7BZZ5 65 aa6.37□□□□□ -1.39
BRCC3-202ENST00000340647 KRTAP4-9Q9BYQ8 210 aa6.35□□□□□ -1.39
BRCC3-202ENST00000340647 H3BS24 57 aa6.34□□□□□ -1.39
BRCC3-202ENST00000340647 KRTAP12-1P59990 96 aa6.33□□□□□ -1.4
BRCC3-202ENST00000340647 KRTAP19-3Q7Z4W3 81 aa6.31□□□□□ -1.4
BRCC3-202ENST00000340647 A0A1B0GU33 70 aa6.3□□□□□ -1.4
BRCC3-202ENST00000340647 SERP1Q9Y6X1 66 aa6.3□□□□□ -1.4
BRCC3-202ENST00000340647 SEC61GP60059 68 aa6.28□□□□□ -1.4
BRCC3-202ENST00000340647 SPINT4Q6UDR6 99 aa6.26□□□□□ -1.41
BRCC3-202ENST00000340647 KRTAP19-5Q3LI72 72 aa6.23□□□□□ -1.41
BRCC3-202ENST00000340647 KRTAP4-12Q9BQ66 201 aa6.23□□□□□ -1.41
BRCC3-202ENST00000340647 A8MU10 97 aa6.16□□□□□ -1.42
BRCC3-202ENST00000340647 LCE1DQ5T752 114 aa6.14□□□□□ -1.43
BRCC3-202ENST00000340647 MT1GP13640 62 aa6.13□□□□□ -1.43
BRCC3-202ENST00000340647 A0A1B0GU69 56 aa6.11□□□□□ -1.43
BRCC3-202ENST00000340647 C10orf95Q9H7T3 257 aa6.09□□□□□ -1.43
BRCC3-202ENST00000340647 HMCN1Q96RW7 5635 aa6.09□□□□□ -1.43
BRCC3-202ENST00000340647 MT1LQ93083 61 aa6.08□□□□□ -1.44
BRCC3-202ENST00000340647 MT1MQ8N339 61 aa6.07□□□□□ -1.44
BRCC3-202ENST00000340647 SMIM26A0A096LP01 95 aa6.06□□□□□ -1.44
BRCC3-202ENST00000340647 CCDC179H3BU77 68 aa6.05□□□□□ -1.44
BRCC3-202ENST00000340647 ANAPC13Q9BS18 74 aa6.05□□□□□ -1.44
BRCC3-202ENST00000340647 AHNAK2Q8IVF2 5795 aa6.04□□□□□ -1.44
BRCC3-202ENST00000340647 LCE3AQ5TA76 89 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms