RNA–Protein interactions for RNA: ENST00000340612.4

CCDC30-201, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC30, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-201ENST00000340612 IGFL1Q6UW32 110 aa1.2□□□□□ -2.22
CCDC30-201ENST00000340612 C4orf3Q8WVX3 66 aa1.2□□□□□ -2.22
CCDC30-201ENST00000340612 MAP1AP78559 2803 aaPredicted RBP1.2□□□□□ -2.22
CCDC30-201ENST00000340612 LY6EQ16553 131 aa1.2□□□□□ -2.22
CCDC30-201ENST00000340612 RHPN1-AS1Q9BWJ2 59 aa1.2□□□□□ -2.22
CCDC30-201ENST00000340612 AKAP13Q12802 2813 aa1.2□□□□□ -2.22
CCDC30-201ENST00000340612 NBASA2RRP1 2371 aa1.19□□□□□ -2.22
CCDC30-201ENST00000340612 GVQW2A0A096LPI5 108 aaPredicted RBP1.19□□□□□ -2.22
CCDC30-201ENST00000340612 K7EIL1 84 aa1.19□□□□□ -2.22
CCDC30-201ENST00000340612 DEFB130BP0DP73 79 aa1.19□□□□□ -2.22
CCDC30-201ENST00000340612 DEFB130AP0DP74 79 aa1.19□□□□□ -2.22
CCDC30-201ENST00000340612 MRPL34Q9BQ48 92 aaKnown RBP1.19□□□□□ -2.22
CCDC30-201ENST00000340612 CUBNO60494 3623 aa1.18□□□□□ -2.22
CCDC30-201ENST00000340612 CSPG4Q6UVK1 2322 aa1.18□□□□□ -2.22
CCDC30-201ENST00000340612 HIVEP1P15822 2718 aa1.18□□□□□ -2.22
CCDC30-201ENST00000340612 TGP01266 2768 aa1.18□□□□□ -2.22
CCDC30-201ENST00000340612 DEFB131AP59861 70 aa1.18□□□□□ -2.22
CCDC30-201ENST00000340612 DEFB109BQ30KR1 87 aa1.18□□□□□ -2.22
CCDC30-201ENST00000340612 PLAC4Q8WY50 150 aa1.18□□□□□ -2.22
CCDC30-201ENST00000340612 Q9Y3F1 56 aa1.18□□□□□ -2.22
CCDC30-201ENST00000340612 CACNA1HO95180 2353 aa1.18□□□□□ -2.22
CCDC30-201ENST00000340612 MXRA5Q9NR99 2828 aa1.17□□□□□ -2.22
CCDC30-201ENST00000340612 LYNX1P0DP58 116 aa1.17□□□□□ -2.22
CCDC30-201ENST00000340612 STAB2Q8WWQ8 2551 aa1.17□□□□□ -2.22
CCDC30-201ENST00000340612 H1FX-AS1Q4G0G2 97 aa1.16□□□□□ -2.22
CCDC30-201ENST00000340612 ROS1P08922 2347 aa1.16□□□□□ -2.22
CCDC30-201ENST00000340612 DCHS2Q6V1P9 2916 aa1.16□□□□□ -2.22
CCDC30-201ENST00000340612 SPRR1AP35321 89 aa1.15□□□□□ -2.22
CCDC30-201ENST00000340612 Q6ZRN7 208 aaPredicted RBP1.15□□□□□ -2.22
CCDC30-201ENST00000340612 RPL37P61927 97 aaKnown RBP1.14□□□□□ -2.23
CCDC30-201ENST00000340612 DEFB136Q30KP8 78 aa1.14□□□□□ -2.23
CCDC30-201ENST00000340612 PRLHP81277 87 aa1.14□□□□□ -2.23
CCDC30-201ENST00000340612 USMG5Q96IX5 58 aa1.14□□□□□ -2.23
CCDC30-201ENST00000340612 INE1O15225 51 aa1.13□□□□□ -2.23
CCDC30-201ENST00000340612 SPINK1P00995 79 aa1.13□□□□□ -2.23
CCDC30-201ENST00000340612 COX6B2Q6YFQ2 88 aa1.13□□□□□ -2.23
CCDC30-201ENST00000340612 DYNC2H1Q8NCM8 4307 aaKnown RBP1.13□□□□□ -2.23
CCDC30-201ENST00000340612 MUC5ACP98088 5654 aa1.13□□□□□ -2.23
CCDC30-201ENST00000340612 DEFB133Q30KQ1 61 aa1.13□□□□□ -2.23
CCDC30-201ENST00000340612 BRD3OSQ6XYD6 125 aa1.13□□□□□ -2.23
CCDC30-201ENST00000340612 APCP25054 2843 aa1.13□□□□□ -2.23
CCDC30-201ENST00000340612 LCE3DQ9BYE3 92 aa1.12□□□□□ -2.23
CCDC30-201ENST00000340612 NOP10Q9NPE3 64 aaKnown RBP1.12□□□□□ -2.23
CCDC30-201ENST00000340612 FSIP2Q5CZC0 6907 aa1.12□□□□□ -2.23
CCDC30-201ENST00000340612 H3BUA1 57 aa1.12□□□□□ -2.23
CCDC30-201ENST00000340612 UBE2DNLQ8IWF7 75 aa1.12□□□□□ -2.23
CCDC30-201ENST00000340612 DMBT1Q9UGM3 2413 aaPredicted RBP1.12□□□□□ -2.23
CCDC30-201ENST00000340612 KMT2DO14686 5537 aa1.11□□□□□ -2.23
CCDC30-201ENST00000340612 SONP18583 2426 aaKnown RBP1.11□□□□□ -2.23
CCDC30-201ENST00000340612 VPS13CQ709C8 3753 aa1.11□□□□□ -2.23
CCDC30-201ENST00000340612 MUC19Q7Z5P9 8384 aa1.1□□□□□ -2.23
CCDC30-201ENST00000340612 MDN1Q9NU22 5596 aa1.1□□□□□ -2.23
CCDC30-201ENST00000340612 A0A096LPF7 62 aa1.1□□□□□ -2.23
CCDC30-201ENST00000340612 SPRR1BP22528 89 aa1.1□□□□□ -2.23
CCDC30-201ENST00000340612 C10orf99Q6UWK7 81 aa1.1□□□□□ -2.23
CCDC30-201ENST00000340612 DNAH1Q9P2D7 4330 aa1.1□□□□□ -2.23
CCDC30-201ENST00000340612 KRTAP13-2Q52LG2 175 aa1.09□□□□□ -2.23
CCDC30-201ENST00000340612 NIPBLQ6KC79 2804 aaeCLIP1.09□□□□□ -2.24
CCDC30-201ENST00000340612 DEFB119Q8N690 84 aa1.09□□□□□ -2.24
CCDC30-201ENST00000340612 APLNQ9ULZ1 77 aa1.09□□□□□ -2.24
CCDC30-201ENST00000340612 ITPR2Q14571 2701 aa1.09□□□□□ -2.24
CCDC30-201ENST00000340612 A0A096LNI7 61 aa1.08□□□□□ -2.24
CCDC30-201ENST00000340612 S4R3F8 94 aa1.08□□□□□ -2.24
CCDC30-201ENST00000340612 ACANP16112 2415 aa1.08□□□□□ -2.24
CCDC30-201ENST00000340612 DNAH7Q8WXX0 4024 aa1.08□□□□□ -2.24
CCDC30-201ENST00000340612 RNF213Q63HN8 5207 aa1.08□□□□□ -2.24
CCDC30-201ENST00000340612 A0A0D9SG42 100 aa1.08□□□□□ -2.24
CCDC30-201ENST00000340612 KRTAP13-4Q3LI77 160 aa1.07□□□□□ -2.24
CCDC30-201ENST00000340612 PRO0255Q9UI72 69 aa1.07□□□□□ -2.24
CCDC30-201ENST00000340612 TRRAPQ9Y4A5 3859 aa1.06□□□□□ -2.24
CCDC30-201ENST00000340612 H3BUX3 64 aa1.06□□□□□ -2.24
CCDC30-201ENST00000340612 VPS13DQ5THJ4 4388 aa1.06□□□□□ -2.24
CCDC30-201ENST00000340612 COL7A1Q02388 2944 aa1.06□□□□□ -2.24
CCDC30-201ENST00000340612 PP632Q6XCG6 107 aa1.05□□□□□ -2.24
CCDC30-201ENST00000340612 U3KQA8 63 aa1.05□□□□□ -2.24
CCDC30-201ENST00000340612 LYSTQ99698 3801 aa1.05□□□□□ -2.24
CCDC30-201ENST00000340612 DEFB103AP81534 67 aa1.04□□□□□ -2.24
CCDC30-201ENST00000340612 SPINK6Q6UWN8 80 aa1.04□□□□□ -2.24
CCDC30-201ENST00000340612 FRAS1Q86XX4 4008 aa1.04□□□□□ -2.24
CCDC30-201ENST00000340612 KRTAP12-1P59990 96 aa1.03□□□□□ -2.24
CCDC30-201ENST00000340612 ANK2Q01484 3957 aa1.03□□□□□ -2.24
CCDC30-201ENST00000340612 KRTAP10-10P60014 251 aa1.02□□□□□ -2.25
CCDC30-201ENST00000340612 LRP1BQ9NZR2 4599 aa1.02□□□□□ -2.25
CCDC30-201ENST00000340612 CENPEQ02224 2701 aa1.01□□□□□ -2.25
CCDC30-201ENST00000340612 FCGBPQ9Y6R7 5405 aaPredicted RBP1.01□□□□□ -2.25
CCDC30-201ENST00000340612 KRTAP13-1Q8IUC0 172 aa1.01□□□□□ -2.25
CCDC30-201ENST00000340612 HRNRQ86YZ3 2850 aaPredicted RBP1□□□□□ -2.25
CCDC30-201ENST00000340612 DNAH3Q8TD57 4116 aa1□□□□□ -2.25
CCDC30-201ENST00000340612 USH2AO75445 5202 aa1□□□□□ -2.25
CCDC30-201ENST00000340612 DNAH8Q96JB1 4490 aa1□□□□□ -2.25
CCDC30-201ENST00000340612 HSPG2P98160 4391 aa1□□□□□ -2.25
CCDC30-201ENST00000340612 MYCBP2O75592 4640 aa1□□□□□ -2.25
CCDC30-201ENST00000340612 DNAH11Q96DT5 4516 aa1□□□□□ -2.25
CCDC30-201ENST00000340612 DNAH10Q8IVF4 4471 aa0.98□□□□□ -2.25
CCDC30-201ENST00000340612 DEFB4AO15263 64 aa0.98□□□□□ -2.25
CCDC30-201ENST00000340612 LINC01556Q5JQF7 62 aa0.98□□□□□ -2.25
CCDC30-201ENST00000340612 HECTD4Q9Y4D8 3996 aa0.97□□□□□ -2.25
CCDC30-201ENST00000340612 HTN3P15516 51 aa0.97□□□□□ -2.25
CCDC30-201ENST00000340612 ZNF469Q96JG9 3925 aaPredicted RBP0.97□□□□□ -2.25
CCDC30-201ENST00000340612 DNAH17Q9UFH2 4485 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms