RNA–Protein interactions for RNA: ENST00000340398.4

H3F3C-201, Transcript of H3 histone family member 3C, humanhuman

APPRIS P1 BASIC

Gene H3F3C, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3C-201ENST00000340398 KRTAP10-5P60370 271 aa7.28□□□□□ -1.24
H3F3C-201ENST00000340398 CXCL6P80162 114 aa7.28□□□□□ -1.24
H3F3C-201ENST00000340398 CSAG1Q6PB30 78 aa7.28□□□□□ -1.24
H3F3C-201ENST00000340398 KRTAP20-1Q3LI63 56 aa7.27□□□□□ -1.25
H3F3C-201ENST00000340398 LCA10Q71F78 164 aa7.27□□□□□ -1.25
H3F3C-201ENST00000340398 C1orf64Q8NEQ6 169 aa7.26□□□□□ -1.25
H3F3C-201ENST00000340398 MT-ATP8P03928 68 aa7.2□□□□□ -1.26
H3F3C-201ENST00000340398 KRTAP5-9P26371 169 aa7.2□□□□□ -1.26
H3F3C-201ENST00000340398 KLKP1Q107X0 134 aa7.19□□□□□ -1.26
H3F3C-201ENST00000340398 IMUPQ9GZP8 106 aa7.18□□□□□ -1.26
H3F3C-201ENST00000340398 LINC00643Q86TS7 51 aa7.17□□□□□ -1.26
H3F3C-201ENST00000340398 KMT2DO14686 5537 aa7.14□□□□□ -1.27
H3F3C-201ENST00000340398 MDN1Q9NU22 5596 aa7.1□□□□□ -1.27
H3F3C-201ENST00000340398 A0A087WVE0 104 aa7.1□□□□□ -1.27
H3F3C-201ENST00000340398 UBL5Q9BZL1 73 aa7.09□□□□□ -1.27
H3F3C-201ENST00000340398 ATP5EP2Q5VTU8 51 aa7.07□□□□□ -1.28
H3F3C-201ENST00000340398 ANAPC13Q9BS18 74 aa7.06□□□□□ -1.28
H3F3C-201ENST00000340398 KRTAP4-8Q9BYQ9 185 aa7.05□□□□□ -1.28
H3F3C-201ENST00000340398 TP53AIP1Q9HCN2 124 aa7.04□□□□□ -1.28
H3F3C-201ENST00000340398 CYP4F30PQ9H0H9 118 aa7.02□□□□□ -1.29
H3F3C-201ENST00000340398 CRIPTQ9P021 101 aa7.02□□□□□ -1.29
H3F3C-201ENST00000340398 KRTAP2-3P0C7H8 128 aa7□□□□□ -1.29
H3F3C-201ENST00000340398 KRTAP2-4Q9BYR9 128 aa7□□□□□ -1.29
H3F3C-201ENST00000340398 ATOX1O00244 68 aa6.96□□□□□ -1.3
H3F3C-201ENST00000340398 KRTAP19-4Q3LI73 84 aa6.96□□□□□ -1.3
H3F3C-201ENST00000340398 HIST1H4AP62805 103 aaKnown RBP6.95□□□□□ -1.3
H3F3C-201ENST00000340398 SPRR2FQ96RM1 72 aa6.95□□□□□ -1.3
H3F3C-201ENST00000340398 KRTAP4-12Q9BQ66 201 aa6.94□□□□□ -1.3
H3F3C-201ENST00000340398 SPRR2EP22531 72 aa6.92□□□□□ -1.3
H3F3C-201ENST00000340398 SPRR2BP35325 72 aa6.92□□□□□ -1.3
H3F3C-201ENST00000340398 SPRR2AP35326 72 aa6.92□□□□□ -1.3
H3F3C-201ENST00000340398 UQCRQO14949 82 aa6.9□□□□□ -1.3
H3F3C-201ENST00000340398 NDUFC1O43677 76 aa6.87□□□□□ -1.31
H3F3C-201ENST00000340398 MT1XP80297 61 aa6.87□□□□□ -1.31
H3F3C-201ENST00000340398 ADM2Q7Z4H4 148 aa6.87□□□□□ -1.31
H3F3C-201ENST00000340398 SMIM20Q8N5G0 67 aa6.87□□□□□ -1.31
H3F3C-201ENST00000340398 TRAV22A0A0B4J277 110 aa6.86□□□□□ -1.31
H3F3C-201ENST00000340398 LOC101927531A0A1B0GV80 90 aa6.86□□□□□ -1.31
H3F3C-201ENST00000340398 H0YAA0 97 aa6.86□□□□□ -1.31
H3F3C-201ENST00000340398 COX7CP15954 63 aa6.86□□□□□ -1.31
H3F3C-201ENST00000340398 CCDC179H3BU77 68 aa6.85□□□□□ -1.31
H3F3C-201ENST00000340398 SERP2Q8N6R1 65 aa6.84□□□□□ -1.31
H3F3C-201ENST00000340398 PRO2289Q9P1D8 64 aa6.83□□□□□ -1.32
H3F3C-201ENST00000340398 A8MUN3 132 aa6.82□□□□□ -1.32
H3F3C-201ENST00000340398 KRTAP8-1Q8IUC2 63 aa6.82□□□□□ -1.32
H3F3C-201ENST00000340398 LCE1AQ5T7P2 110 aa6.8□□□□□ -1.32
H3F3C-201ENST00000340398 PLAC4Q8WY50 150 aa6.78□□□□□ -1.32
H3F3C-201ENST00000340398 TRAV7A0A075B6U4 112 aa6.77□□□□□ -1.33
H3F3C-201ENST00000340398 KRTAP2-2Q9BYT5 123 aa6.76□□□□□ -1.33
H3F3C-201ENST00000340398 KRTAP2-1Q9BYU5 128 aa6.76□□□□□ -1.33
H3F3C-201ENST00000340398 H0Y9P7 68 aa6.75□□□□□ -1.33
H3F3C-201ENST00000340398 KRTAP4-8A0A0G2JLE6 195 aa6.74□□□□□ -1.33
H3F3C-201ENST00000340398 LCE3BQ5TA77 95 aa6.74□□□□□ -1.33
H3F3C-201ENST00000340398 KRTAP12-2P59991 146 aa6.71□□□□□ -1.34
H3F3C-201ENST00000340398 TMEM258P61165 79 aa6.71□□□□□ -1.34
H3F3C-201ENST00000340398 P0C880 135 aa6.68□□□□□ -1.34
H3F3C-201ENST00000340398 SPRR2DP22532 72 aa6.68□□□□□ -1.34
H3F3C-201ENST00000340398 R4GN34 69 aa6.66□□□□□ -1.34
H3F3C-201ENST00000340398 RPS28P62857 69 aaKnown RBP6.64□□□□□ -1.35
H3F3C-201ENST00000340398 LINC00208Q96KT6 92 aa6.64□□□□□ -1.35
H3F3C-201ENST00000340398 C20orf197Q8N268 126 aa6.62□□□□□ -1.35
H3F3C-201ENST00000340398 M0QZ58 72 aa6.61□□□□□ -1.35
H3F3C-201ENST00000340398 ATP5EP56381 51 aaPredicted RBP6.61□□□□□ -1.35
H3F3C-201ENST00000340398 OCR1Q9BZK8 76 aa6.6□□□□□ -1.35
H3F3C-201ENST00000340398 KRTAP10-7P60409 375 aaPredicted RBP6.58□□□□□ -1.36
H3F3C-201ENST00000340398 LINC01554Q52M75 96 aa6.58□□□□□ -1.36
H3F3C-201ENST00000340398 KRTAP9-9Q9BYP9 154 aa6.56□□□□□ -1.36
H3F3C-201ENST00000340398 KRTAP9-4Q9BYQ2 154 aa6.56□□□□□ -1.36
H3F3C-201ENST00000340398 H7BZZ5 65 aa6.55□□□□□ -1.36
H3F3C-201ENST00000340398 LCE4AQ5TA78 99 aa6.54□□□□□ -1.36
H3F3C-201ENST00000340398 CYSTM1Q9H1C7 97 aa6.54□□□□□ -1.36
H3F3C-201ENST00000340398 H3BPC8 53 aa6.5□□□□□ -1.37
H3F3C-201ENST00000340398 KRTAP10-12P60413 245 aa6.5□□□□□ -1.37
H3F3C-201ENST00000340398 SERP1Q9Y6X1 66 aa6.5□□□□□ -1.37
H3F3C-201ENST00000340398 MP68P56378 58 aa6.49□□□□□ -1.37
H3F3C-201ENST00000340398 SNURFQ9Y675 71 aa6.49□□□□□ -1.37
H3F3C-201ENST00000340398 KRTAP23-1A1A580 65 aa6.47□□□□□ -1.37
H3F3C-201ENST00000340398 DMAC1Q96GE9 116 aa6.43□□□□□ -1.38
H3F3C-201ENST00000340398 SMIM26A0A096LP01 95 aa6.37□□□□□ -1.39
H3F3C-201ENST00000340398 SEC61GP60059 68 aa6.36□□□□□ -1.39
H3F3C-201ENST00000340398 SPANXA2-OT1Q8N9U9 137 aa6.35□□□□□ -1.39
H3F3C-201ENST00000340398 LCE1DQ5T752 114 aa6.32□□□□□ -1.4
H3F3C-201ENST00000340398 DSTQ03001 7570 aaKnown RBP6.29□□□□□ -1.4
H3F3C-201ENST00000340398 ACYP2P14621 99 aa6.22□□□□□ -1.41
H3F3C-201ENST00000340398 KRTAP4-9Q9BYQ8 210 aa6.22□□□□□ -1.41
H3F3C-201ENST00000340398 GPR98Q8WXG9 6306 aa6.21□□□□□ -1.41
H3F3C-201ENST00000340398 V9GYY9 64 aa6.21□□□□□ -1.42
H3F3C-201ENST00000340398 LCE5AQ5TCM9 118 aa6.17□□□□□ -1.42
H3F3C-201ENST00000340398 KRTAP4-7Q9BYR0 210 aa6.17□□□□□ -1.42
H3F3C-201ENST00000340398 Q1T7F1 81 aa6.16□□□□□ -1.42
H3F3C-201ENST00000340398 SPTSSBQ8NFR3 76 aa6.16□□□□□ -1.42
H3F3C-201ENST00000340398 KRTAP19-7Q3SYF9 63 aa6.15□□□□□ -1.42
H3F3C-201ENST00000340398 KRTAP13-4Q3LI77 160 aa6.13□□□□□ -1.43
H3F3C-201ENST00000340398 CHKB-CPT1BH3BT56 60 aa6.1□□□□□ -1.43
H3F3C-201ENST00000340398 MT1EP04732 61 aa6.1□□□□□ -1.43
H3F3C-201ENST00000340398 KRTAP19-3Q7Z4W3 81 aa6.1□□□□□ -1.43
H3F3C-201ENST00000340398 COA5Q86WW8 74 aa6.09□□□□□ -1.43
H3F3C-201ENST00000340398 CAMK2N1Q7Z7J9 78 aa6.08□□□□□ -1.44
H3F3C-201ENST00000340398 PRO0628Q9UI54 55 aa6.03□□□□□ -1.44
H3F3C-201ENST00000340398 LINC01558Q9Y6Z2 57 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms