RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 PRO0628Q9UI54 55 aa7.95□□□□□ -1.14
TUBB4B-201ENST00000340384 COX6B2Q6YFQ2 88 aa7.94□□□□□ -1.14
TUBB4B-201ENST00000340384 RNF213Q63HN8 5207 aa7.9□□□□□ -1.15
TUBB4B-201ENST00000340384 A0A1B0GU69 56 aa7.89□□□□□ -1.15
TUBB4B-201ENST00000340384 MUC2Q02817 5179 aa7.89□□□□□ -1.15
TUBB4B-201ENST00000340384 A6NED7 52 aa7.89□□□□□ -1.15
TUBB4B-201ENST00000340384 KRTAP3-1Q9BYR8 98 aa7.87□□□□□ -1.15
TUBB4B-201ENST00000340384 KRTAP4-1Q9BYQ7 146 aa7.85□□□□□ -1.15
TUBB4B-201ENST00000340384 SEC61GP60059 68 aa7.83□□□□□ -1.16
TUBB4B-201ENST00000340384 SEC61BP60468 96 aaKnown RBP7.81□□□□□ -1.16
TUBB4B-201ENST00000340384 CDC42SE1Q9NRR8 79 aa7.78□□□□□ -1.16
TUBB4B-201ENST00000340384 RBM12B-AS1Q9P1G2 102 aa7.72□□□□□ -1.17
TUBB4B-201ENST00000340384 UQCR11O14957 56 aa7.71□□□□□ -1.17
TUBB4B-201ENST00000340384 LCA10Q71F78 164 aa7.7□□□□□ -1.18
TUBB4B-201ENST00000340384 S4R3F8 94 aa7.69□□□□□ -1.18
TUBB4B-201ENST00000340384 H1FX-AS1Q4G0G2 97 aa7.68□□□□□ -1.18
TUBB4B-201ENST00000340384 MIR22HGQ0VDD5 57 aa7.63□□□□□ -1.19
TUBB4B-201ENST00000340384 SPATA8Q6RVD6 105 aa7.63□□□□□ -1.19
TUBB4B-201ENST00000340384 A8MU10 97 aa7.61□□□□□ -1.19
TUBB4B-201ENST00000340384 KRTAP19-2Q3LHN2 52 aa7.61□□□□□ -1.19
TUBB4B-201ENST00000340384 KRTAP3-3Q9BYR6 98 aa7.58□□□□□ -1.2
TUBB4B-201ENST00000340384 FAT4Q6V0I7 4981 aa7.58□□□□□ -1.2
TUBB4B-201ENST00000340384 A0A1B0GU33 70 aa7.56□□□□□ -1.2
TUBB4B-201ENST00000340384 PMAIP1Q13794 54 aa7.56□□□□□ -1.2
TUBB4B-201ENST00000340384 LCE2CQ5TA81 110 aa7.54□□□□□ -1.2
TUBB4B-201ENST00000340384 CSAG1Q6PB30 78 aa7.5□□□□□ -1.21
TUBB4B-201ENST00000340384 A6NN06 94 aa7.44□□□□□ -1.22
TUBB4B-201ENST00000340384 H0YAA0 97 aa7.42□□□□□ -1.22
TUBB4B-201ENST00000340384 FLGP20930 4061 aaPredicted RBP7.41□□□□□ -1.22
TUBB4B-201ENST00000340384 KRTAP10-6P60371 365 aaPredicted RBP7.4□□□□□ -1.22
TUBB4B-201ENST00000340384 KRTAP3-2Q9BYR7 98 aa7.38□□□□□ -1.23
TUBB4B-201ENST00000340384 MT1HP80294 61 aa7.36□□□□□ -1.23
TUBB4B-201ENST00000340384 LCE2AQ5TA79 106 aaPredicted RBP7.36□□□□□ -1.23
TUBB4B-201ENST00000340384 ADM2Q7Z4H4 148 aa7.36□□□□□ -1.23
TUBB4B-201ENST00000340384 KTN1-AS1Q86SY8 53 aa7.34□□□□□ -1.24
TUBB4B-201ENST00000340384 K7ERS5 55 aa7.33□□□□□ -1.24
TUBB4B-201ENST00000340384 P0C880 135 aa7.3□□□□□ -1.24
TUBB4B-201ENST00000340384 M0QZ58 72 aa7.24□□□□□ -1.25
TUBB4B-201ENST00000340384 KRTAP13-4Q3LI77 160 aa7.21□□□□□ -1.26
TUBB4B-201ENST00000340384 A0A0D9SG42 100 aa7.16□□□□□ -1.26
TUBB4B-201ENST00000340384 M0R2T5 61 aa7.15□□□□□ -1.27
TUBB4B-201ENST00000340384 LORP23490 312 aaPredicted RBP7.12□□□□□ -1.27
TUBB4B-201ENST00000340384 R4GN34 69 aa7.11□□□□□ -1.27
TUBB4B-201ENST00000340384 KRTAP9-8Q9BYQ0 159 aa7.07□□□□□ -1.28
TUBB4B-201ENST00000340384 SPINT4Q6UDR6 99 aa7.01□□□□□ -1.29
TUBB4B-201ENST00000340384 KRTAP12-1P59990 96 aa7□□□□□ -1.29
TUBB4B-201ENST00000340384 MT2AP02795 61 aa6.99□□□□□ -1.29
TUBB4B-201ENST00000340384 ROMO1P60602 79 aa6.99□□□□□ -1.29
TUBB4B-201ENST00000340384 CRIPTQ9P021 101 aa6.99□□□□□ -1.29
TUBB4B-201ENST00000340384 KRTAP12-2P59991 146 aa6.98□□□□□ -1.29
TUBB4B-201ENST00000340384 PRAC1Q96KF2 57 aa6.98□□□□□ -1.29
TUBB4B-201ENST00000340384 MT1FP04733 61 aa6.95□□□□□ -1.3
TUBB4B-201ENST00000340384 LINC01554Q52M75 96 aa6.95□□□□□ -1.3
TUBB4B-201ENST00000340384 KRTAP10-10P60014 251 aa6.86□□□□□ -1.31
TUBB4B-201ENST00000340384 KRTAP9-3Q9BYQ3 159 aa6.83□□□□□ -1.32
TUBB4B-201ENST00000340384 KRTAP25-1Q3LHN0 102 aa6.82□□□□□ -1.32
TUBB4B-201ENST00000340384 LCE2DQ5TA82 110 aaPredicted RBP6.77□□□□□ -1.33
TUBB4B-201ENST00000340384 LCE2BO14633 110 aa6.71□□□□□ -1.34
TUBB4B-201ENST00000340384 CAMK2N1Q7Z7J9 78 aa6.71□□□□□ -1.34
TUBB4B-201ENST00000340384 KRTAP19-1Q8IUB9 90 aa6.71□□□□□ -1.34
TUBB4B-201ENST00000340384 KRTAP9-2Q9BYQ4 174 aa6.71□□□□□ -1.34
TUBB4B-201ENST00000340384 SPRR2GQ9BYE4 73 aa6.68□□□□□ -1.34
TUBB4B-201ENST00000340384 USH2AO75445 5202 aa6.68□□□□□ -1.34
TUBB4B-201ENST00000340384 FSIP2Q5CZC0 6907 aa6.61□□□□□ -1.35
TUBB4B-201ENST00000340384 PLAC4Q8WY50 150 aa6.61□□□□□ -1.35
TUBB4B-201ENST00000340384 C10orf95Q9H7T3 257 aa6.59□□□□□ -1.35
TUBB4B-201ENST00000340384 KRTAP19-8Q3LI54 63 aa6.54□□□□□ -1.36
TUBB4B-201ENST00000340384 SSPOA2VEC9 5147 aa6.54□□□□□ -1.36
TUBB4B-201ENST00000340384 MT1BP07438 61 aa6.51□□□□□ -1.37
TUBB4B-201ENST00000340384 TNP1P09430 55 aa6.43□□□□□ -1.38
TUBB4B-201ENST00000340384 PP632Q6XCG6 107 aa6.43□□□□□ -1.38
TUBB4B-201ENST00000340384 CRCT1Q9UGL9 99 aa6.4□□□□□ -1.38
TUBB4B-201ENST00000340384 KRTAP23-1A1A580 65 aa6.34□□□□□ -1.39
TUBB4B-201ENST00000340384 KRTAP19-6Q3LI70 58 aa6.34□□□□□ -1.39
TUBB4B-201ENST00000340384 KRTAP9-6A0A140TA67 174 aa6.3□□□□□ -1.4
TUBB4B-201ENST00000340384 FCGBPQ9Y6R7 5405 aaPredicted RBP6.28□□□□□ -1.4
TUBB4B-201ENST00000340384 KRTAP10-5P60370 271 aa6.21□□□□□ -1.41
TUBB4B-201ENST00000340384 MT1XP80297 61 aa6.21□□□□□ -1.41
TUBB4B-201ENST00000340384 PRO2289Q9P1D8 64 aa6.21□□□□□ -1.41
TUBB4B-201ENST00000340384 KRTAP15-1Q3LI76 137 aa6.07□□□□□ -1.44
TUBB4B-201ENST00000340384 H3BS24 57 aa6.06□□□□□ -1.44
TUBB4B-201ENST00000340384 LCE3AQ5TA76 89 aa6.03□□□□□ -1.44
TUBB4B-201ENST00000340384 KRTAP10-12P60413 245 aa6□□□□□ -1.45
TUBB4B-201ENST00000340384 MACF1Q9UPN3 7388 aaKnown RBP5.97□□□□□ -1.45
TUBB4B-201ENST00000340384 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.96□□□□□ -1.46
TUBB4B-201ENST00000340384 KRTAP10-7P60409 375 aaPredicted RBP5.95□□□□□ -1.46
TUBB4B-201ENST00000340384 KRTAP8-1Q8IUC2 63 aa5.95□□□□□ -1.46
TUBB4B-201ENST00000340384 KMT2DO14686 5537 aa5.91□□□□□ -1.46
TUBB4B-201ENST00000340384 SYNE2Q8WXH0 6885 aaKnown RBP5.88□□□□□ -1.47
TUBB4B-201ENST00000340384 KRTAP4-8A0A0G2JLE6 195 aa5.83□□□□□ -1.48
TUBB4B-201ENST00000340384 KRTAP4-8Q9BYQ9 185 aa5.83□□□□□ -1.48
TUBB4B-201ENST00000340384 KRTAP12-3P60328 96 aa5.81□□□□□ -1.48
TUBB4B-201ENST00000340384 LUZP6Q538Z0 58 aa5.77□□□□□ -1.48
TUBB4B-201ENST00000340384 NDUFAF8A1L188 74 aa5.73□□□□□ -1.49
TUBB4B-201ENST00000340384 SPRR5A0A1B0GTR4 108 aa5.72□□□□□ -1.49
TUBB4B-201ENST00000340384 KRTAP9-7A8MTY7 169 aa5.72□□□□□ -1.49
TUBB4B-201ENST00000340384 KRTAP6-3Q3LI67 103 aa5.7□□□□□ -1.5
TUBB4B-201ENST00000340384 KRTAP5-9P26371 169 aa5.66□□□□□ -1.5
TUBB4B-201ENST00000340384 KRTAP19-5Q3LI72 72 aa5.66□□□□□ -1.5
TUBB4B-201ENST00000340384 MUC12Q9UKN1 5478 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms