RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 LCA10Q71F78 164 aa10.54□□□□□ -0.72
VRK2-201ENST00000340157 KRTAP19-2Q3LHN2 52 aa10.53□□□□□ -0.72
VRK2-201ENST00000340157 V9GYY9 64 aa10.53□□□□□ -0.72
VRK2-201ENST00000340157 S4R3F8 94 aa10.51□□□□□ -0.73
VRK2-201ENST00000340157 PSPHP1O15172 72 aa10.49□□□□□ -0.73
VRK2-201ENST00000340157 UBR4Q5T4S7 5183 aa10.49□□□□□ -0.73
VRK2-201ENST00000340157 SPTSSBQ8NFR3 76 aa10.46□□□□□ -0.74
VRK2-201ENST00000340157 PRR15LQ9BU68 103 aa10.45□□□□□ -0.74
VRK2-201ENST00000340157 LCE2DQ5TA82 110 aaPredicted RBP10.43□□□□□ -0.74
VRK2-201ENST00000340157 Q5VV11 94 aa10.41□□□□□ -0.74
VRK2-201ENST00000340157 RNF213Q63HN8 5207 aa10.39□□□□□ -0.75
VRK2-201ENST00000340157 A0A1B0GU69 56 aa10.34□□□□□ -0.75
VRK2-201ENST00000340157 FLGP20930 4061 aaPredicted RBP10.28□□□□□ -0.76
VRK2-201ENST00000340157 LCE2CQ5TA81 110 aa10.25□□□□□ -0.77
VRK2-201ENST00000340157 CSAG1Q6PB30 78 aa10.23□□□□□ -0.77
VRK2-201ENST00000340157 SEC61GP60059 68 aa10.2□□□□□ -0.78
VRK2-201ENST00000340157 KRTAP3-2Q9BYR7 98 aa10.18□□□□□ -0.78
VRK2-201ENST00000340157 FAT4Q6V0I7 4981 aa10.17□□□□□ -0.78
VRK2-201ENST00000340157 KRTAP10-6P60371 365 aaPredicted RBP10.15□□□□□ -0.78
VRK2-201ENST00000340157 A6NED7 52 aa10.12□□□□□ -0.79
VRK2-201ENST00000340157 P0C880 135 aa10.08□□□□□ -0.8
VRK2-201ENST00000340157 ADM2Q7Z4H4 148 aa10.07□□□□□ -0.8
VRK2-201ENST00000340157 A8MU10 97 aa10.06□□□□□ -0.8
VRK2-201ENST00000340157 BRK1Q8WUW1 75 aa10.06□□□□□ -0.8
VRK2-201ENST00000340157 H0YAA0 97 aa10.04□□□□□ -0.8
VRK2-201ENST00000340157 A0A1B0GU33 70 aa10.02□□□□□ -0.8
VRK2-201ENST00000340157 UQCR11O14957 56 aa10.02□□□□□ -0.81
VRK2-201ENST00000340157 MT1HP80294 61 aa10□□□□□ -0.81
VRK2-201ENST00000340157 CDC42SE1Q9NRR8 79 aa9.96□□□□□ -0.81
VRK2-201ENST00000340157 SPATA8Q6RVD6 105 aa9.94□□□□□ -0.82
VRK2-201ENST00000340157 MIR22HGQ0VDD5 57 aa9.93□□□□□ -0.82
VRK2-201ENST00000340157 KRTAP13-4Q3LI77 160 aa9.91□□□□□ -0.82
VRK2-201ENST00000340157 PRO0628Q9UI54 55 aa9.85□□□□□ -0.83
VRK2-201ENST00000340157 LORP23490 312 aaPredicted RBP9.83□□□□□ -0.84
VRK2-201ENST00000340157 M0R2T5 61 aa9.82□□□□□ -0.84
VRK2-201ENST00000340157 SVIPQ8NHG7 77 aa9.81□□□□□ -0.84
VRK2-201ENST00000340157 M0QZ58 72 aa9.71□□□□□ -0.85
VRK2-201ENST00000340157 A0A0D9SG42 100 aa9.66□□□□□ -0.86
VRK2-201ENST00000340157 R4GN34 69 aa9.66□□□□□ -0.86
VRK2-201ENST00000340157 KRTAP9-8Q9BYQ0 159 aa9.66□□□□□ -0.86
VRK2-201ENST00000340157 MT2AP02795 61 aa9.62□□□□□ -0.87
VRK2-201ENST00000340157 MT1FP04733 61 aa9.59□□□□□ -0.87
VRK2-201ENST00000340157 LCE2AQ5TA79 106 aaPredicted RBP9.59□□□□□ -0.87
VRK2-201ENST00000340157 CRIPTQ9P021 101 aa9.53□□□□□ -0.88
VRK2-201ENST00000340157 LINC01554Q52M75 96 aa9.53□□□□□ -0.88
VRK2-201ENST00000340157 A6NN06 94 aa9.49□□□□□ -0.89
VRK2-201ENST00000340157 KRTAP12-1P59990 96 aa9.49□□□□□ -0.89
VRK2-201ENST00000340157 KRTAP10-10P60014 251 aa9.49□□□□□ -0.89
VRK2-201ENST00000340157 PMAIP1Q13794 54 aa9.49□□□□□ -0.89
VRK2-201ENST00000340157 KRTAP12-2P59991 146 aa9.49□□□□□ -0.89
VRK2-201ENST00000340157 KRTAP19-1Q8IUB9 90 aa9.44□□□□□ -0.9
VRK2-201ENST00000340157 SPRR2GQ9BYE4 73 aa9.42□□□□□ -0.9
VRK2-201ENST00000340157 SPINT4Q6UDR6 99 aa9.4□□□□□ -0.9
VRK2-201ENST00000340157 K7ERS5 55 aa9.38□□□□□ -0.91
VRK2-201ENST00000340157 KRTAP9-3Q9BYQ3 159 aa9.3□□□□□ -0.92
VRK2-201ENST00000340157 KRTAP19-8Q3LI54 63 aa9.17□□□□□ -0.94
VRK2-201ENST00000340157 KTN1-AS1Q86SY8 53 aa9.11□□□□□ -0.95
VRK2-201ENST00000340157 MT1BP07438 61 aa9.09□□□□□ -0.95
VRK2-201ENST00000340157 ROMO1P60602 79 aa9.08□□□□□ -0.96
VRK2-201ENST00000340157 LCE2BO14633 110 aa9.06□□□□□ -0.96
VRK2-201ENST00000340157 CAMK2N1Q7Z7J9 78 aa9.04□□□□□ -0.96
VRK2-201ENST00000340157 PLAC4Q8WY50 150 aa9.03□□□□□ -0.96
VRK2-201ENST00000340157 C10orf95Q9H7T3 257 aa9□□□□□ -0.97
VRK2-201ENST00000340157 PRAC1Q96KF2 57 aa8.97□□□□□ -0.97
VRK2-201ENST00000340157 USH2AO75445 5202 aa8.84□□□□□ -0.99
VRK2-201ENST00000340157 MT1XP80297 61 aa8.81□□□□□ -1
VRK2-201ENST00000340157 KRTAP10-5P60370 271 aa8.79□□□□□ -1
VRK2-201ENST00000340157 KRTAP25-1Q3LHN0 102 aa8.7□□□□□ -1.02
VRK2-201ENST00000340157 TNP1P09430 55 aa8.61□□□□□ -1.03
VRK2-201ENST00000340157 SSPOA2VEC9 5147 aa8.57□□□□□ -1.04
VRK2-201ENST00000340157 PRO2289Q9P1D8 64 aa8.56□□□□□ -1.04
VRK2-201ENST00000340157 FSIP2Q5CZC0 6907 aa8.52□□□□□ -1.05
VRK2-201ENST00000340157 KRTAP10-7P60409 375 aaPredicted RBP8.47□□□□□ -1.05
VRK2-201ENST00000340157 KRTAP19-6Q3LI70 58 aa8.44□□□□□ -1.06
VRK2-201ENST00000340157 KRTAP23-1A1A580 65 aa8.35□□□□□ -1.07
VRK2-201ENST00000340157 PP632Q6XCG6 107 aa8.35□□□□□ -1.07
VRK2-201ENST00000340157 LCE3AQ5TA76 89 aa8.33□□□□□ -1.08
VRK2-201ENST00000340157 KRTAP10-12P60413 245 aa8.31□□□□□ -1.08
VRK2-201ENST00000340157 KRTAP9-2Q9BYQ4 174 aa8.3□□□□□ -1.08
VRK2-201ENST00000340157 KMT2DO14686 5537 aa8.19□□□□□ -1.1
VRK2-201ENST00000340157 FCGBPQ9Y6R7 5405 aaPredicted RBP8.18□□□□□ -1.1
VRK2-201ENST00000340157 KRTAP4-8A0A0G2JLE6 195 aa8.14□□□□□ -1.11
VRK2-201ENST00000340157 KRTAP4-8Q9BYQ9 185 aa8.14□□□□□ -1.11
VRK2-201ENST00000340157 KRTAP8-1Q8IUC2 63 aa8.13□□□□□ -1.11
VRK2-201ENST00000340157 CRCT1Q9UGL9 99 aa7.99□□□□□ -1.13
VRK2-201ENST00000340157 KRTAP12-3P60328 96 aa7.96□□□□□ -1.13
VRK2-201ENST00000340157 KRTAP19-5Q3LI72 72 aa7.95□□□□□ -1.14
VRK2-201ENST00000340157 KRTAP19-7Q3SYF9 63 aa7.86□□□□□ -1.15
VRK2-201ENST00000340157 KRTAP15-1Q3LI76 137 aa7.81□□□□□ -1.16
VRK2-201ENST00000340157 MACF1Q9UPN3 7388 aaKnown RBP7.8□□□□□ -1.16
VRK2-201ENST00000340157 MT1EP04732 61 aa7.7□□□□□ -1.18
VRK2-201ENST00000340157 KRTAP9-6A0A140TA67 174 aa7.6□□□□□ -1.19
VRK2-201ENST00000340157 SYNE2Q8WXH0 6885 aaKnown RBP7.56□□□□□ -1.2
VRK2-201ENST00000340157 MT1LQ93083 61 aa7.55□□□□□ -1.2
VRK2-201ENST00000340157 MUC12Q9UKN1 5478 aa7.55□□□□□ -1.2
VRK2-201ENST00000340157 SPRR5A0A1B0GTR4 108 aa7.52□□□□□ -1.21
VRK2-201ENST00000340157 SPRR2FQ96RM1 72 aa7.49□□□□□ -1.21
VRK2-201ENST00000340157 LCE3CQ5T5A8 94 aa7.45□□□□□ -1.22
VRK2-201ENST00000340157 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.42□□□□□ -1.22
VRK2-201ENST00000340157 KRTAP5-9P26371 169 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms