RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 FAM236AA0A1B0GUQ0 79 aa6.93□□□□□ -1.3
PRKN-201ENST00000338468 FAM236BA0A1B0GV22 79 aa6.93□□□□□ -1.3
PRKN-201ENST00000338468 J3QR89 54 aa6.91□□□□□ -1.3
PRKN-201ENST00000338468 LINC00208Q96KT6 92 aa6.91□□□□□ -1.3
PRKN-201ENST00000338468 KLKP1Q107X0 134 aa6.9□□□□□ -1.3
PRKN-201ENST00000338468 NEBP20929 6669 aa6.9□□□□□ -1.31
PRKN-201ENST00000338468 SPRR2GQ9BYE4 73 aa6.88□□□□□ -1.31
PRKN-201ENST00000338468 MT1BP07438 61 aa6.85□□□□□ -1.31
PRKN-201ENST00000338468 MP68P56378 58 aa6.84□□□□□ -1.31
PRKN-201ENST00000338468 KRTAP19-8Q3LI54 63 aa6.83□□□□□ -1.32
PRKN-201ENST00000338468 A8MUN3 132 aa6.82□□□□□ -1.32
PRKN-201ENST00000338468 KRTAP20-1Q3LI63 56 aa6.82□□□□□ -1.32
PRKN-201ENST00000338468 NDUFC1O43677 76 aa6.8□□□□□ -1.32
PRKN-201ENST00000338468 MUC12Q9UKN1 5478 aa6.79□□□□□ -1.32
PRKN-201ENST00000338468 H3BPC8 53 aa6.77□□□□□ -1.33
PRKN-201ENST00000338468 Q5VV11 94 aa6.77□□□□□ -1.33
PRKN-201ENST00000338468 IMUPQ9GZP8 106 aa6.77□□□□□ -1.33
PRKN-201ENST00000338468 H0YAA0 97 aa6.76□□□□□ -1.33
PRKN-201ENST00000338468 SCGB1A1P11684 91 aa6.76□□□□□ -1.33
PRKN-201ENST00000338468 MT-ATP8P03928 68 aa6.75□□□□□ -1.33
PRKN-201ENST00000338468 CRIPTQ9P021 101 aa6.74□□□□□ -1.33
PRKN-201ENST00000338468 A6NN06 94 aa6.7□□□□□ -1.34
PRKN-201ENST00000338468 K7ERU9 68 aa6.7□□□□□ -1.34
PRKN-201ENST00000338468 DMAC1Q96GE9 116 aa6.7□□□□□ -1.34
PRKN-201ENST00000338468 ADM2Q7Z4H4 148 aa6.68□□□□□ -1.34
PRKN-201ENST00000338468 KRTAP10-5P60370 271 aa6.65□□□□□ -1.34
PRKN-201ENST00000338468 TRAV7A0A075B6U4 112 aa6.63□□□□□ -1.35
PRKN-201ENST00000338468 SMIM20Q8N5G0 67 aa6.6□□□□□ -1.35
PRKN-201ENST00000338468 KRTAP5-9P26371 169 aa6.59□□□□□ -1.35
PRKN-201ENST00000338468 P0C880 135 aa6.58□□□□□ -1.36
PRKN-201ENST00000338468 MDN1Q9NU22 5596 aa6.56□□□□□ -1.36
PRKN-201ENST00000338468 KMT2DO14686 5537 aa6.55□□□□□ -1.36
PRKN-201ENST00000338468 KRTAP2-3P0C7H8 128 aa6.5□□□□□ -1.37
PRKN-201ENST00000338468 ACYP2P14621 99 aa6.5□□□□□ -1.37
PRKN-201ENST00000338468 KRTAP2-4Q9BYR9 128 aa6.5□□□□□ -1.37
PRKN-201ENST00000338468 SNURFQ9Y675 71 aa6.5□□□□□ -1.37
PRKN-201ENST00000338468 C20orf197Q8N268 126 aa6.47□□□□□ -1.37
PRKN-201ENST00000338468 R4GN34 69 aa6.47□□□□□ -1.37
PRKN-201ENST00000338468 M0QZ58 72 aa6.44□□□□□ -1.38
PRKN-201ENST00000338468 MT1XP80297 61 aa6.43□□□□□ -1.38
PRKN-201ENST00000338468 SERP2Q8N6R1 65 aa6.43□□□□□ -1.38
PRKN-201ENST00000338468 SPANXA2-OT1Q8N9U9 137 aa6.39□□□□□ -1.39
PRKN-201ENST00000338468 PLAC4Q8WY50 150 aa6.39□□□□□ -1.39
PRKN-201ENST00000338468 SPTSSBQ8NFR3 76 aa6.37□□□□□ -1.39
PRKN-201ENST00000338468 CHKB-CPT1BH3BT56 60 aa6.36□□□□□ -1.39
PRKN-201ENST00000338468 PRO2289Q9P1D8 64 aa6.35□□□□□ -1.39
PRKN-201ENST00000338468 LINC01554Q52M75 96 aa6.34□□□□□ -1.39
PRKN-201ENST00000338468 SPRR2EP22531 72 aa6.33□□□□□ -1.4
PRKN-201ENST00000338468 SPRR2BP35325 72 aa6.33□□□□□ -1.4
PRKN-201ENST00000338468 SPRR2AP35326 72 aa6.33□□□□□ -1.4
PRKN-201ENST00000338468 SPRR2FQ96RM1 72 aa6.31□□□□□ -1.4
PRKN-201ENST00000338468 H3BS24 57 aa6.28□□□□□ -1.4
PRKN-201ENST00000338468 KRTAP2-2Q9BYT5 123 aa6.26□□□□□ -1.41
PRKN-201ENST00000338468 KRTAP2-1Q9BYU5 128 aa6.26□□□□□ -1.41
PRKN-201ENST00000338468 COX7CP15954 63 aa6.25□□□□□ -1.41
PRKN-201ENST00000338468 KRTAP12-2P59991 146 aa6.24□□□□□ -1.41
PRKN-201ENST00000338468 COA5Q86WW8 74 aa6.22□□□□□ -1.41
PRKN-201ENST00000338468 CYSTM1Q9H1C7 97 aa6.21□□□□□ -1.42
PRKN-201ENST00000338468 KRTAP13-4Q3LI77 160 aa6.2□□□□□ -1.42
PRKN-201ENST00000338468 H7BZZ5 65 aa6.17□□□□□ -1.42
PRKN-201ENST00000338468 LCE1AQ5T7P2 110 aa6.16□□□□□ -1.42
PRKN-201ENST00000338468 KRTAP8-1Q8IUC2 63 aa6.15□□□□□ -1.42
PRKN-201ENST00000338468 KRTAP4-8A0A0G2JLE6 195 aa6.14□□□□□ -1.43
PRKN-201ENST00000338468 KRTAP10-7P60409 375 aaPredicted RBP6.14□□□□□ -1.43
PRKN-201ENST00000338468 KRTAP4-8Q9BYQ9 185 aa6.14□□□□□ -1.43
PRKN-201ENST00000338468 SPRR2DP22532 72 aa6.13□□□□□ -1.43
PRKN-201ENST00000338468 KRTAP10-12P60413 245 aa6.1□□□□□ -1.43
PRKN-201ENST00000338468 ANAPC13Q9BS18 74 aa6.04□□□□□ -1.44
PRKN-201ENST00000338468 SEC61GP60059 68 aa6.01□□□□□ -1.45
PRKN-201ENST00000338468 SERP1Q9Y6X1 66 aa6□□□□□ -1.45
PRKN-201ENST00000338468 LCE3BQ5TA77 95 aa5.99□□□□□ -1.45
PRKN-201ENST00000338468 CCDC179H3BU77 68 aa5.97□□□□□ -1.45
PRKN-201ENST00000338468 SPATA8Q6RVD6 105 aa5.97□□□□□ -1.45
PRKN-201ENST00000338468 GPR98Q8WXG9 6306 aa5.95□□□□□ -1.46
PRKN-201ENST00000338468 A0A0D9SG42 100 aa5.95□□□□□ -1.46
PRKN-201ENST00000338468 A0A1B0GU33 70 aa5.95□□□□□ -1.46
PRKN-201ENST00000338468 CAMK2N1Q7Z7J9 78 aa5.95□□□□□ -1.46
PRKN-201ENST00000338468 KRTAP12-1P59990 96 aa5.87□□□□□ -1.47
PRKN-201ENST00000338468 A0A1B0GU69 56 aa5.86□□□□□ -1.47
PRKN-201ENST00000338468 SPINT4Q6UDR6 99 aa5.84□□□□□ -1.47
PRKN-201ENST00000338468 ATP5EP56381 51 aaPredicted RBP5.81□□□□□ -1.48
PRKN-201ENST00000338468 A8MU10 97 aa5.78□□□□□ -1.48
PRKN-201ENST00000338468 SMIM26A0A096LP01 95 aa5.76□□□□□ -1.49
PRKN-201ENST00000338468 KRTAP19-7Q3SYF9 63 aa5.76□□□□□ -1.49
PRKN-201ENST00000338468 LINC01558Q9Y6Z2 57 aa5.71□□□□□ -1.5
PRKN-201ENST00000338468 TMEM258P61165 79 aa5.7□□□□□ -1.5
PRKN-201ENST00000338468 DSTQ03001 7570 aaKnown RBP5.69□□□□□ -1.5
PRKN-201ENST00000338468 MT1EP04732 61 aa5.69□□□□□ -1.5
PRKN-201ENST00000338468 PRR15LQ9BU68 103 aa5.67□□□□□ -1.5
PRKN-201ENST00000338468 KRTAP4-9Q9BYQ8 210 aa5.67□□□□□ -1.5
PRKN-201ENST00000338468 LCE5AQ5TCM9 118 aa5.63□□□□□ -1.51
PRKN-201ENST00000338468 C10orf95Q9H7T3 257 aa5.62□□□□□ -1.51
PRKN-201ENST00000338468 KRTAP19-5Q3LI72 72 aa5.61□□□□□ -1.51
PRKN-201ENST00000338468 KRTAP19-3Q7Z4W3 81 aa5.61□□□□□ -1.51
PRKN-201ENST00000338468 TNP1P09430 55 aa5.52□□□□□ -1.53
PRKN-201ENST00000338468 LCE3AQ5TA76 89 aa5.52□□□□□ -1.53
PRKN-201ENST00000338468 SVIPQ8NHG7 77 aa5.52□□□□□ -1.53
PRKN-201ENST00000338468 UQCR11O14957 56 aa5.51□□□□□ -1.53
PRKN-201ENST00000338468 LCE1DQ5T752 114 aa5.5□□□□□ -1.53
PRKN-201ENST00000338468 MT1GP13640 62 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms