RNA–Protein interactions for RNA: ENST00000337907.7

RERE-201, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 8,026 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-201ENST00000337907 HUWE1Q7Z6Z7 4374 aaKnown RBP5.07□□□□□ -1.6
RERE-201ENST00000337907 OTOGQ6ZRI0 2925 aa5.07□□□□□ -1.6
RERE-201ENST00000337907 KRTAP10-4P60372 401 aaPredicted RBP5.07□□□□□ -1.6
RERE-201ENST00000337907 AKAP9Q99996 3911 aa5.05□□□□□ -1.6
RERE-201ENST00000337907 CSMD2Q7Z408 3487 aa5.03□□□□□ -1.6
RERE-201ENST00000337907 SPRR2FQ96RM1 72 aa4.98□□□□□ -1.61
RERE-201ENST00000337907 KRTAP19-4Q3LI73 84 aa4.94□□□□□ -1.62
RERE-201ENST00000337907 DNAH1Q9P2D7 4330 aa4.94□□□□□ -1.62
RERE-201ENST00000337907 LCE3CQ5T5A8 94 aa4.9□□□□□ -1.62
RERE-201ENST00000337907 ZNF469Q96JG9 3925 aaPredicted RBP4.9□□□□□ -1.62
RERE-201ENST00000337907 CSMD3Q7Z407 3707 aa4.89□□□□□ -1.63
RERE-201ENST00000337907 MT1HP80294 61 aa4.88□□□□□ -1.63
RERE-201ENST00000337907 KRTAP19-5Q3LI72 72 aa4.87□□□□□ -1.63
RERE-201ENST00000337907 SPRR2GQ9BYE4 73 aa4.87□□□□□ -1.63
RERE-201ENST00000337907 DNAH2Q9P225 4427 aa4.78□□□□□ -1.64
RERE-201ENST00000337907 CMYA5Q8N3K9 4069 aa4.77□□□□□ -1.65
RERE-201ENST00000337907 MT2AP02795 61 aa4.76□□□□□ -1.65
RERE-201ENST00000337907 SPRR2EP22531 72 aa4.75□□□□□ -1.65
RERE-201ENST00000337907 SPRR2BP35325 72 aa4.75□□□□□ -1.65
RERE-201ENST00000337907 SPRR2AP35326 72 aa4.75□□□□□ -1.65
RERE-201ENST00000337907 DNAH7Q8WXX0 4024 aa4.74□□□□□ -1.65
RERE-201ENST00000337907 DNAH3Q8TD57 4116 aa4.74□□□□□ -1.65
RERE-201ENST00000337907 LCE3BQ5TA77 95 aa4.65□□□□□ -1.66
RERE-201ENST00000337907 KRTAP4-1Q9BYQ7 146 aa4.65□□□□□ -1.67
RERE-201ENST00000337907 KRTAP12-4P60329 112 aa4.65□□□□□ -1.67
RERE-201ENST00000337907 SPRR2DP22532 72 aa4.62□□□□□ -1.67
RERE-201ENST00000337907 DNAH6Q9C0G6 4158 aa4.62□□□□□ -1.67
RERE-201ENST00000337907 MT1FP04733 61 aa4.62□□□□□ -1.67
RERE-201ENST00000337907 LCE2BO14633 110 aa4.59□□□□□ -1.67
RERE-201ENST00000337907 DNAH9Q9NYC9 4486 aa4.57□□□□□ -1.68
RERE-201ENST00000337907 ANK2Q01484 3957 aa4.53□□□□□ -1.68
RERE-201ENST00000337907 VPS13BQ7Z7G8 4022 aa4.5□□□□□ -1.69
RERE-201ENST00000337907 LYSTQ99698 3801 aa4.49□□□□□ -1.69
RERE-201ENST00000337907 FAT2Q9NYQ8 4349 aa4.48□□□□□ -1.69
RERE-201ENST00000337907 DNAH10Q8IVF4 4471 aa4.45□□□□□ -1.7
RERE-201ENST00000337907 MT1GP13640 62 aa4.44□□□□□ -1.7
RERE-201ENST00000337907 LCE3DQ9BYE3 92 aa4.43□□□□□ -1.7
RERE-201ENST00000337907 FRAS1Q86XX4 4008 aa4.41□□□□□ -1.7
RERE-201ENST00000337907 DNAH8Q96JB1 4490 aa4.41□□□□□ -1.7
RERE-201ENST00000337907 DNAH17Q9UFH2 4485 aa4.39□□□□□ -1.71
RERE-201ENST00000337907 DNAH11Q96DT5 4516 aa4.38□□□□□ -1.71
RERE-201ENST00000337907 VPS13DQ5THJ4 4388 aa4.38□□□□□ -1.71
RERE-201ENST00000337907 PLECQ15149 4684 aaKnown RBP4.38□□□□□ -1.71
RERE-201ENST00000337907 KRTAP19-8Q3LI54 63 aa4.37□□□□□ -1.71
RERE-201ENST00000337907 KMT2AQ03164 3969 aa4.36□□□□□ -1.71
RERE-201ENST00000337907 DYNC2H1Q8NCM8 4307 aaKnown RBP4.35□□□□□ -1.71
RERE-201ENST00000337907 LCE3EQ5T5B0 92 aa4.34□□□□□ -1.71
RERE-201ENST00000337907 HECTD4Q9Y4D8 3996 aa4.34□□□□□ -1.72
RERE-201ENST00000337907 LCE2CQ5TA81 110 aa4.32□□□□□ -1.72
RERE-201ENST00000337907 PRKDCP78527 4128 aaKnown RBP4.3□□□□□ -1.72
RERE-201ENST00000337907 STARD9Q9P2P6 4700 aa4.28□□□□□ -1.72
RERE-201ENST00000337907 MT1XP80297 61 aa4.27□□□□□ -1.73
RERE-201ENST00000337907 DNAH5Q8TE73 4624 aa4.26□□□□□ -1.73
RERE-201ENST00000337907 LCE2DQ5TA82 110 aaPredicted RBP4.23□□□□□ -1.73
RERE-201ENST00000337907 KRTAP19-1Q8IUB9 90 aa4.21□□□□□ -1.74
RERE-201ENST00000337907 LRP1Q07954 4544 aaKnown RBP4.17□□□□□ -1.74
RERE-201ENST00000337907 FLGP20930 4061 aaPredicted RBP4.13□□□□□ -1.75
RERE-201ENST00000337907 KRTAP19-3Q7Z4W3 81 aa4.11□□□□□ -1.75
RERE-201ENST00000337907 LRP1BQ9NZR2 4599 aa4.1□□□□□ -1.75
RERE-201ENST00000337907 MT1LQ93083 61 aa4.09□□□□□ -1.75
RERE-201ENST00000337907 MT1BP07438 61 aa4.08□□□□□ -1.76
RERE-201ENST00000337907 SPRR5A0A1B0GTR4 108 aa4.08□□□□□ -1.76
RERE-201ENST00000337907 KRTAP4-8A0A0G2JLE6 195 aa4.07□□□□□ -1.76
RERE-201ENST00000337907 KRTAP4-8Q9BYQ9 185 aa4.07□□□□□ -1.76
RERE-201ENST00000337907 MT3P25713 68 aa4.07□□□□□ -1.76
RERE-201ENST00000337907 PKHD1L1Q86WI1 4243 aa4.06□□□□□ -1.76
RERE-201ENST00000337907 DYNC1H1Q14204 4646 aaKnown RBP4.06□□□□□ -1.76
RERE-201ENST00000337907 MT4P47944 62 aa4.04□□□□□ -1.76
RERE-201ENST00000337907 KRTAP9-8Q9BYQ0 159 aa4.03□□□□□ -1.76
RERE-201ENST00000337907 FAT1Q14517 4588 aa4.02□□□□□ -1.77
RERE-201ENST00000337907 SACSQ9NZJ4 4579 aa4.02□□□□□ -1.77
RERE-201ENST00000337907 PRM1P04553 51 aa4.01□□□□□ -1.77
RERE-201ENST00000337907 LCE1BQ5T7P3 118 aa3.97□□□□□ -1.77
RERE-201ENST00000337907 KRTAP9-3Q9BYQ3 159 aa3.97□□□□□ -1.77
RERE-201ENST00000337907 APOBP04114 4563 aaKnown RBP3.96□□□□□ -1.77
RERE-201ENST00000337907 LCE1DQ5T752 114 aa3.95□□□□□ -1.78
RERE-201ENST00000337907 MT1EP04732 61 aa3.91□□□□□ -1.78
RERE-201ENST00000337907 FAT3Q8TDW7 4589 aa3.9□□□□□ -1.79
RERE-201ENST00000337907 PKD1P98161 4303 aa3.88□□□□□ -1.79
RERE-201ENST00000337907 PKHD1P08F94 4074 aa3.87□□□□□ -1.79
RERE-201ENST00000337907 DNHD1Q96M86 4753 aa3.86□□□□□ -1.79
RERE-201ENST00000337907 MT1MQ8N339 61 aa3.84□□□□□ -1.79
RERE-201ENST00000337907 KRTAP4-7Q9BYR0 210 aa3.81□□□□□ -1.8
RERE-201ENST00000337907 LCE5AQ5TCM9 118 aa3.78□□□□□ -1.8
RERE-201ENST00000337907 TNXBP22105 4242 aa3.78□□□□□ -1.8
RERE-201ENST00000337907 HSPG2P98160 4391 aa3.77□□□□□ -1.81
RERE-201ENST00000337907 KRTAP17-1Q9BYP8 105 aa3.72□□□□□ -1.81
RERE-201ENST00000337907 HYDINQ4G0P3 5121 aa3.71□□□□□ -1.82
RERE-201ENST00000337907 LOC100996750A0A140TA64 210 aa3.7□□□□□ -1.82
RERE-201ENST00000337907 KRTAP19-6Q3LI70 58 aa3.69□□□□□ -1.82
RERE-201ENST00000337907 KRTAP9-2Q9BYQ4 174 aa3.67□□□□□ -1.82
RERE-201ENST00000337907 KRTAP20-1Q3LI63 56 aa3.65□□□□□ -1.83
RERE-201ENST00000337907 RYR1P21817 5038 aa3.64□□□□□ -1.83
RERE-201ENST00000337907 MYCBP2O75592 4640 aa3.63□□□□□ -1.83
RERE-201ENST00000337907 MT1AP04731 61 aa3.62□□□□□ -1.83
RERE-201ENST00000337907 RYR3Q15413 4870 aa3.61□□□□□ -1.83
RERE-201ENST00000337907 KRTAP2-3P0C7H8 128 aa3.57□□□□□ -1.84
RERE-201ENST00000337907 KRTAP2-4Q9BYR9 128 aa3.57□□□□□ -1.84
RERE-201ENST00000337907 KRTAP2-1Q9BYU5 128 aa3.57□□□□□ -1.84
RERE-201ENST00000337907 LCE1CQ5T751 118 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 237.9 ms