RNA–Protein interactions for RNA: ENST00000336300.9

MRPL55-202, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-202ENST00000336300 TRAV7A0A075B6U4 112 aa7.39□□□□□ -1.23
MRPL55-202ENST00000336300 NDUFC1O43677 76 aa7.37□□□□□ -1.23
MRPL55-202ENST00000336300 KRTAP3-3Q9BYR6 98 aa7.35□□□□□ -1.23
MRPL55-202ENST00000336300 USH2AO75445 5202 aa7.34□□□□□ -1.24
MRPL55-202ENST00000336300 LCE2BO14633 110 aa7.33□□□□□ -1.24
MRPL55-202ENST00000336300 DMAC1Q96GE9 116 aa7.27□□□□□ -1.25
MRPL55-202ENST00000336300 SERP2Q8N6R1 65 aa7.23□□□□□ -1.25
MRPL55-202ENST00000336300 SSPOA2VEC9 5147 aa7.21□□□□□ -1.25
MRPL55-202ENST00000336300 H0YAA0 97 aa7.2□□□□□ -1.26
MRPL55-202ENST00000336300 ACYP2P14621 99 aa7.2□□□□□ -1.26
MRPL55-202ENST00000336300 SNURFQ9Y675 71 aa7.2□□□□□ -1.26
MRPL55-202ENST00000336300 CRIPTQ9P021 101 aa7.18□□□□□ -1.26
MRPL55-202ENST00000336300 C20orf197Q8N268 126 aa7.17□□□□□ -1.26
MRPL55-202ENST00000336300 KRTAP19-1Q8IUB9 90 aa7.14□□□□□ -1.27
MRPL55-202ENST00000336300 ADM2Q7Z4H4 148 aa7.13□□□□□ -1.27
MRPL55-202ENST00000336300 SPRR2GQ9BYE4 73 aa7.13□□□□□ -1.27
MRPL55-202ENST00000336300 SPTSSBQ8NFR3 76 aa7.11□□□□□ -1.27
MRPL55-202ENST00000336300 SPANXA2-OT1Q8N9U9 137 aa7.1□□□□□ -1.27
MRPL55-202ENST00000336300 CHKB-CPT1BH3BT56 60 aa7.08□□□□□ -1.28
MRPL55-202ENST00000336300 Q5VV11 94 aa7.08□□□□□ -1.28
MRPL55-202ENST00000336300 KRTAP19-6Q3LI70 58 aa7.07□□□□□ -1.28
MRPL55-202ENST00000336300 COX7CP15954 63 aa7.06□□□□□ -1.28
MRPL55-202ENST00000336300 KRTAP19-8Q3LI54 63 aa7.02□□□□□ -1.29
MRPL55-202ENST00000336300 FCGBPQ9Y6R7 5405 aaPredicted RBP7.02□□□□□ -1.29
MRPL55-202ENST00000336300 R4GN34 69 aa6.97□□□□□ -1.29
MRPL55-202ENST00000336300 MT1BP07438 61 aa6.96□□□□□ -1.3
MRPL55-202ENST00000336300 P0C880 135 aa6.95□□□□□ -1.3
MRPL55-202ENST00000336300 ANAPC13Q9BS18 74 aa6.95□□□□□ -1.3
MRPL55-202ENST00000336300 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.93□□□□□ -1.3
MRPL55-202ENST00000336300 KRTAP3-2Q9BYR7 98 aa6.91□□□□□ -1.3
MRPL55-202ENST00000336300 A6NN06 94 aa6.9□□□□□ -1.3
MRPL55-202ENST00000336300 M0QZ58 72 aa6.9□□□□□ -1.3
MRPL55-202ENST00000336300 H7BZZ5 65 aa6.87□□□□□ -1.31
MRPL55-202ENST00000336300 COA5Q86WW8 74 aa6.87□□□□□ -1.31
MRPL55-202ENST00000336300 PLAC4Q8WY50 150 aa6.84□□□□□ -1.31
MRPL55-202ENST00000336300 CYSTM1Q9H1C7 97 aa6.82□□□□□ -1.32
MRPL55-202ENST00000336300 KRTAP9-7A8MTY7 169 aa6.8□□□□□ -1.32
MRPL55-202ENST00000336300 LINC01554Q52M75 96 aa6.8□□□□□ -1.32
MRPL55-202ENST00000336300 KRTAP10-5P60370 271 aa6.79□□□□□ -1.32
MRPL55-202ENST00000336300 SEC61GP60059 68 aa6.77□□□□□ -1.33
MRPL55-202ENST00000336300 MACF1Q9UPN3 7388 aaKnown RBP6.76□□□□□ -1.33
MRPL55-202ENST00000336300 CCDC179H3BU77 68 aa6.75□□□□□ -1.33
MRPL55-202ENST00000336300 PRO2289Q9P1D8 64 aa6.74□□□□□ -1.33
MRPL55-202ENST00000336300 SERP1Q9Y6X1 66 aa6.73□□□□□ -1.33
MRPL55-202ENST00000336300 ATP5EP56381 51 aaPredicted RBP6.68□□□□□ -1.34
MRPL55-202ENST00000336300 SYNE2Q8WXH0 6885 aaKnown RBP6.65□□□□□ -1.35
MRPL55-202ENST00000336300 MT1XP80297 61 aa6.6□□□□□ -1.35
MRPL55-202ENST00000336300 KRTAP6-3Q3LI67 103 aa6.58□□□□□ -1.36
MRPL55-202ENST00000336300 TMEM258P61165 79 aa6.57□□□□□ -1.36
MRPL55-202ENST00000336300 A0A1B0GU33 70 aa6.56□□□□□ -1.36
MRPL55-202ENST00000336300 A0A1B0GU69 56 aa6.56□□□□□ -1.36
MRPL55-202ENST00000336300 KRTAP13-4Q3LI77 160 aa6.55□□□□□ -1.36
MRPL55-202ENST00000336300 PRR15LQ9BU68 103 aa6.48□□□□□ -1.37
MRPL55-202ENST00000336300 SPATA8Q6RVD6 105 aa6.47□□□□□ -1.37
MRPL55-202ENST00000336300 A0A0D9SG42 100 aa6.46□□□□□ -1.38
MRPL55-202ENST00000336300 CAMK2N1Q7Z7J9 78 aa6.46□□□□□ -1.38
MRPL55-202ENST00000336300 KRTAP12-2P59991 146 aa6.44□□□□□ -1.38
MRPL55-202ENST00000336300 SMIM26A0A096LP01 95 aa6.41□□□□□ -1.38
MRPL55-202ENST00000336300 SPINT4Q6UDR6 99 aa6.39□□□□□ -1.39
MRPL55-202ENST00000336300 LINC01558Q9Y6Z2 57 aa6.39□□□□□ -1.39
MRPL55-202ENST00000336300 KMT2DO14686 5537 aa6.35□□□□□ -1.39
MRPL55-202ENST00000336300 KRTAP5-9P26371 169 aa6.35□□□□□ -1.39
MRPL55-202ENST00000336300 KRTAP8-1Q8IUC2 63 aa6.33□□□□□ -1.4
MRPL55-202ENST00000336300 MUC12Q9UKN1 5478 aa6.31□□□□□ -1.4
MRPL55-202ENST00000336300 KRTAP10-7P60409 375 aaPredicted RBP6.31□□□□□ -1.4
MRPL55-202ENST00000336300 KRTAP12-1P59990 96 aa6.29□□□□□ -1.4
MRPL55-202ENST00000336300 KRTAP10-12P60413 245 aa6.29□□□□□ -1.4
MRPL55-202ENST00000336300 A8MU10 97 aa6.26□□□□□ -1.41
MRPL55-202ENST00000336300 SPRR2FQ96RM1 72 aa6.26□□□□□ -1.41
MRPL55-202ENST00000336300 UQCR11O14957 56 aa6.24□□□□□ -1.41
MRPL55-202ENST00000336300 KRTAP4-8A0A0G2JLE6 195 aa6.23□□□□□ -1.41
MRPL55-202ENST00000336300 KRTAP4-8Q9BYQ9 185 aa6.23□□□□□ -1.41
MRPL55-202ENST00000336300 V9GYY9 64 aa6.23□□□□□ -1.41
MRPL55-202ENST00000336300 MDN1Q9NU22 5596 aa6.18□□□□□ -1.42
MRPL55-202ENST00000336300 NEBP20929 6669 aa6.17□□□□□ -1.42
MRPL55-202ENST00000336300 PCP4P48539 62 aa6.16□□□□□ -1.42
MRPL55-202ENST00000336300 Q1T7F1 81 aa6.13□□□□□ -1.43
MRPL55-202ENST00000336300 SPRR2EP22531 72 aa6.11□□□□□ -1.43
MRPL55-202ENST00000336300 SPRR2BP35325 72 aa6.11□□□□□ -1.43
MRPL55-202ENST00000336300 SPRR2AP35326 72 aa6.11□□□□□ -1.43
MRPL55-202ENST00000336300 MIR22HGQ0VDD5 57 aa6.1□□□□□ -1.43
MRPL55-202ENST00000336300 PSPHP1O15172 72 aa6.09□□□□□ -1.43
MRPL55-202ENST00000336300 RPS28P62857 69 aaKnown RBP6.03□□□□□ -1.44
MRPL55-202ENST00000336300 K7ERS5 55 aa6.02□□□□□ -1.45
MRPL55-202ENST00000336300 LCE1AQ5T7P2 110 aa6.02□□□□□ -1.45
MRPL55-202ENST00000336300 TNP1P09430 55 aa6.01□□□□□ -1.45
MRPL55-202ENST00000336300 KRTAP20-1Q3LI63 56 aa6□□□□□ -1.45
MRPL55-202ENST00000336300 C10orf95Q9H7T3 257 aa5.99□□□□□ -1.45
MRPL55-202ENST00000336300 A6NED7 52 aa5.94□□□□□ -1.46
MRPL55-202ENST00000336300 KRTAP2-3P0C7H8 128 aa5.92□□□□□ -1.46
MRPL55-202ENST00000336300 KRTAP2-4Q9BYR9 128 aa5.92□□□□□ -1.46
MRPL55-202ENST00000336300 SPRR2DP22532 72 aa5.91□□□□□ -1.46
MRPL55-202ENST00000336300 KRTAP19-7Q3SYF9 63 aa5.89□□□□□ -1.47
MRPL55-202ENST00000336300 MT1EP04732 61 aa5.85□□□□□ -1.47
MRPL55-202ENST00000336300 KRTAP19-5Q3LI72 72 aa5.83□□□□□ -1.48
MRPL55-202ENST00000336300 LCE3AQ5TA76 89 aa5.81□□□□□ -1.48
MRPL55-202ENST00000336300 KRTAP25-1Q3LHN0 102 aa5.78□□□□□ -1.48
MRPL55-202ENST00000336300 KRTAP19-3Q7Z4W3 81 aa5.77□□□□□ -1.49
MRPL55-202ENST00000336300 KRTAP2-2Q9BYT5 123 aa5.75□□□□□ -1.49
MRPL55-202ENST00000336300 KRTAP2-1Q9BYU5 128 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms