RNA–Protein interactions for RNA: ENST00000333070.4

LCK-201, Transcript of LCK proto-oncogene, Src family tyrosine kinase, humanhuman

TSL 1 (best) BASIC

Gene LCK, Length 2,166 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCK-201ENST00000333070 KIAA1109Q2LD37 5005 aa8.94□□□□□ -0.98
LCK-201ENST00000333070 H1FX-AS1Q4G0G2 97 aa8.92□□□□□ -0.98
LCK-201ENST00000333070 FAT3Q8TDW7 4589 aa8.9□□□□□ -0.99
LCK-201ENST00000333070 EPPK1P58107 5090 aaKnown RBP8.89□□□□□ -0.99
LCK-201ENST00000333070 C9orf92A6NGG3 77 aa8.85□□□□□ -0.99
LCK-201ENST00000333070 K7ERS5 55 aa8.85□□□□□ -0.99
LCK-201ENST00000333070 C20orf166-AS1Q96NR2 134 aa8.84□□□□□ -0.99
LCK-201ENST00000333070 KRTAP3-1Q9BYR8 98 aa8.8□□□□□ -1
LCK-201ENST00000333070 MT1HL1P0DM35 61 aa8.79□□□□□ -1
LCK-201ENST00000333070 DMBT1Q9UGM3 2413 aaPredicted RBP8.78□□□□□ -1
LCK-201ENST00000333070 CRIPTQ9P021 101 aa8.75□□□□□ -1.01
LCK-201ENST00000333070 MYCBP2O75592 4640 aa8.74□□□□□ -1.01
LCK-201ENST00000333070 P0C880 135 aa8.73□□□□□ -1.01
LCK-201ENST00000333070 COX6B2Q6YFQ2 88 aa8.71□□□□□ -1.01
LCK-201ENST00000333070 KRTAP4-5Q9BYR2 181 aa8.66□□□□□ -1.02
LCK-201ENST00000333070 RPL37P61927 97 aaKnown RBP8.59□□□□□ -1.03
LCK-201ENST00000333070 XP32Q5T750 250 aa8.58□□□□□ -1.04
LCK-201ENST00000333070 TPRXLQ17RH7 258 aa8.54□□□□□ -1.04
LCK-201ENST00000333070 SPINT4Q6UDR6 99 aa8.54□□□□□ -1.04
LCK-201ENST00000333070 KRTAP10-6P60371 365 aaPredicted RBP8.49□□□□□ -1.05
LCK-201ENST00000333070 BIRC6Q9NR09 4857 aa8.46□□□□□ -1.05
LCK-201ENST00000333070 ABCA13Q86UQ4 5058 aa8.45□□□□□ -1.06
LCK-201ENST00000333070 KRTAP13-4Q3LI77 160 aa8.45□□□□□ -1.06
LCK-201ENST00000333070 HERC2O95714 4834 aa8.43□□□□□ -1.06
LCK-201ENST00000333070 A0A0D9SG42 100 aa8.43□□□□□ -1.06
LCK-201ENST00000333070 KRTAP15-1Q3LI76 137 aa8.42□□□□□ -1.06
LCK-201ENST00000333070 KRTAP3-2Q9BYR7 98 aa8.4□□□□□ -1.06
LCK-201ENST00000333070 KRTAP3-3Q9BYR6 98 aa8.39□□□□□ -1.07
LCK-201ENST00000333070 C10orf95Q9H7T3 257 aa8.37□□□□□ -1.07
LCK-201ENST00000333070 NDUFAF8A1L188 74 aa8.36□□□□□ -1.07
LCK-201ENST00000333070 LRP2P98164 4655 aa8.36□□□□□ -1.07
LCK-201ENST00000333070 J3QL48 77 aa8.33□□□□□ -1.08
LCK-201ENST00000333070 LPAP08519 4548 aa8.32□□□□□ -1.08
LCK-201ENST00000333070 S4R3F8 94 aa8.3□□□□□ -1.08
LCK-201ENST00000333070 KRTAP12-2P59991 146 aa8.23□□□□□ -1.09
LCK-201ENST00000333070 KRTAP12-1P59990 96 aa8.15□□□□□ -1.1
LCK-201ENST00000333070 SEC61BP60468 96 aaKnown RBP8.14□□□□□ -1.11
LCK-201ENST00000333070 MUC17Q685J3 4493 aa8.04□□□□□ -1.12
LCK-201ENST00000333070 PCLOQ9Y6V0 5065 aa8.04□□□□□ -1.12
LCK-201ENST00000333070 M0QZ58 72 aa8.03□□□□□ -1.12
LCK-201ENST00000333070 KRTAP4-1Q9BYQ7 146 aa8.03□□□□□ -1.12
LCK-201ENST00000333070 HERC1Q15751 4861 aa7.95□□□□□ -1.14
LCK-201ENST00000333070 HMCN2Q8NDA2 5059 aa7.91□□□□□ -1.14
LCK-201ENST00000333070 KRTAP19-2Q3LHN2 52 aa7.88□□□□□ -1.15
LCK-201ENST00000333070 PLAC4Q8WY50 150 aa7.82□□□□□ -1.16
LCK-201ENST00000333070 A0A0A0MQY5 61 aa7.77□□□□□ -1.17
LCK-201ENST00000333070 LUZP6Q538Z0 58 aa7.73□□□□□ -1.17
LCK-201ENST00000333070 MUC2Q02817 5179 aa7.71□□□□□ -1.18
LCK-201ENST00000333070 R4GN34 69 aa7.68□□□□□ -1.18
LCK-201ENST00000333070 FLGP20930 4061 aaPredicted RBP7.66□□□□□ -1.18
LCK-201ENST00000333070 PP632Q6XCG6 107 aa7.58□□□□□ -1.2
LCK-201ENST00000333070 LCE2CQ5TA81 110 aa7.57□□□□□ -1.2
LCK-201ENST00000333070 LORP23490 312 aaPredicted RBP7.5□□□□□ -1.21
LCK-201ENST00000333070 RNF213Q63HN8 5207 aa7.49□□□□□ -1.21
LCK-201ENST00000333070 UBR4Q5T4S7 5183 aa7.47□□□□□ -1.21
LCK-201ENST00000333070 FAT4Q6V0I7 4981 aa7.42□□□□□ -1.22
LCK-201ENST00000333070 MT1HP80294 61 aa7.37□□□□□ -1.23
LCK-201ENST00000333070 CAMK2N1Q7Z7J9 78 aa7.35□□□□□ -1.23
LCK-201ENST00000333070 M0R2T5 61 aa7.27□□□□□ -1.24
LCK-201ENST00000333070 SPRR5A0A1B0GTR4 108 aa7.23□□□□□ -1.25
LCK-201ENST00000333070 KRTAP23-1A1A580 65 aa7.23□□□□□ -1.25
LCK-201ENST00000333070 TNP1P09430 55 aa7.16□□□□□ -1.26
LCK-201ENST00000333070 KRTAP9-8Q9BYQ0 159 aa7.16□□□□□ -1.26
LCK-201ENST00000333070 MT2AP02795 61 aa7.15□□□□□ -1.26
LCK-201ENST00000333070 SPRR2GQ9BYE4 73 aa7.14□□□□□ -1.27
LCK-201ENST00000333070 MT1FP04733 61 aa7.12□□□□□ -1.27
LCK-201ENST00000333070 KRTAP19-1Q8IUB9 90 aa7.11□□□□□ -1.27
LCK-201ENST00000333070 KRTAP10-10P60014 251 aa7.08□□□□□ -1.28
LCK-201ENST00000333070 KRTAP19-8Q3LI54 63 aa6.91□□□□□ -1.3
LCK-201ENST00000333070 PRO2289Q9P1D8 64 aa6.9□□□□□ -1.3
LCK-201ENST00000333070 LCE2AQ5TA79 106 aaPredicted RBP6.89□□□□□ -1.31
LCK-201ENST00000333070 KRTAP9-3Q9BYQ3 159 aa6.88□□□□□ -1.31
LCK-201ENST00000333070 MT1BP07438 61 aa6.81□□□□□ -1.32
LCK-201ENST00000333070 INE1O15225 51 aa6.78□□□□□ -1.32
LCK-201ENST00000333070 LCE3AQ5TA76 89 aa6.68□□□□□ -1.34
LCK-201ENST00000333070 LCE2BO14633 110 aa6.65□□□□□ -1.34
LCK-201ENST00000333070 MT1XP80297 61 aa6.65□□□□□ -1.35
LCK-201ENST00000333070 KRTAP10-5P60370 271 aa6.64□□□□□ -1.35
LCK-201ENST00000333070 KRTAP8-1Q8IUC2 63 aa6.57□□□□□ -1.36
LCK-201ENST00000333070 USH2AO75445 5202 aa6.4□□□□□ -1.38
LCK-201ENST00000333070 KRTAP10-7P60409 375 aaPredicted RBP6.4□□□□□ -1.39
LCK-201ENST00000333070 KRTAP12-3P60328 96 aa6.37□□□□□ -1.39
LCK-201ENST00000333070 KRTAP10-12P60413 245 aa6.35□□□□□ -1.39
LCK-201ENST00000333070 SSPOA2VEC9 5147 aa6.19□□□□□ -1.42
LCK-201ENST00000333070 KRTAP19-6Q3LI70 58 aa6.16□□□□□ -1.42
LCK-201ENST00000333070 LCE2DQ5TA82 110 aaPredicted RBP6.14□□□□□ -1.43
LCK-201ENST00000333070 FSIP2Q5CZC0 6907 aa6.13□□□□□ -1.43
LCK-201ENST00000333070 KRTAP4-8A0A0G2JLE6 195 aa6.09□□□□□ -1.43
LCK-201ENST00000333070 KRTAP4-8Q9BYQ9 185 aa6.09□□□□□ -1.43
LCK-201ENST00000333070 KRTAP19-5Q3LI72 72 aa6.06□□□□□ -1.44
LCK-201ENST00000333070 KMT2DO14686 5537 aa6.04□□□□□ -1.44
LCK-201ENST00000333070 LCE3CQ5T5A8 94 aa6.04□□□□□ -1.44
LCK-201ENST00000333070 KRTAP19-7Q3SYF9 63 aa5.93□□□□□ -1.46
LCK-201ENST00000333070 FCGBPQ9Y6R7 5405 aaPredicted RBP5.85□□□□□ -1.47
LCK-201ENST00000333070 KRTAP2-3P0C7H8 128 aa5.84□□□□□ -1.47
LCK-201ENST00000333070 KRTAP2-4Q9BYR9 128 aa5.84□□□□□ -1.47
LCK-201ENST00000333070 KRTAP2-1Q9BYU5 128 aa5.84□□□□□ -1.47
LCK-201ENST00000333070 KRTAP9-6A8MVA2 160 aa5.83□□□□□ -1.48
LCK-201ENST00000333070 KRTAP9-2Q9BYQ4 174 aa5.82□□□□□ -1.48
LCK-201ENST00000333070 MT1EP04732 61 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms