RNA–Protein interactions for RNA: ENST00000332220.10

YBX1-202, Transcript of Y-box binding protein 1, humanhuman

TSL 5

Gene YBX1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-202ENST00000332220 FSIP2Q5CZC0 6907 aa9.75□□□□□ -0.85
YBX1-202ENST00000332220 KRTAP9-6A0A140TA67 174 aa9.73□□□□□ -0.85
YBX1-202ENST00000332220 LCE2BO14633 110 aa9.73□□□□□ -0.85
YBX1-202ENST00000332220 SERP2Q8N6R1 65 aa9.73□□□□□ -0.85
YBX1-202ENST00000332220 DMAC1Q96GE9 116 aa9.71□□□□□ -0.86
YBX1-202ENST00000332220 CRCT1Q9UGL9 99 aa9.71□□□□□ -0.86
YBX1-202ENST00000332220 SNURFQ9Y675 71 aa9.71□□□□□ -0.86
YBX1-202ENST00000332220 USH2AO75445 5202 aa9.69□□□□□ -0.86
YBX1-202ENST00000332220 NDUFC1O43677 76 aa9.68□□□□□ -0.86
YBX1-202ENST00000332220 C20orf197Q8N268 126 aa9.66□□□□□ -0.86
YBX1-202ENST00000332220 COX7CP15954 63 aa9.54□□□□□ -0.88
YBX1-202ENST00000332220 SSPOA2VEC9 5147 aa9.52□□□□□ -0.88
YBX1-202ENST00000332220 ACYP2P14621 99 aa9.52□□□□□ -0.89
YBX1-202ENST00000332220 KRTAP19-1Q8IUB9 90 aa9.52□□□□□ -0.89
YBX1-202ENST00000332220 H0YAA0 97 aa9.5□□□□□ -0.89
YBX1-202ENST00000332220 SPANXA2-OT1Q8N9U9 137 aa9.48□□□□□ -0.89
YBX1-202ENST00000332220 ADM2Q7Z4H4 148 aa9.44□□□□□ -0.9
YBX1-202ENST00000332220 SPRR2GQ9BYE4 73 aa9.43□□□□□ -0.9
YBX1-202ENST00000332220 ANAPC13Q9BS18 74 aa9.4□□□□□ -0.9
YBX1-202ENST00000332220 CYSTM1Q9H1C7 97 aa9.4□□□□□ -0.9
YBX1-202ENST00000332220 CRIPTQ9P021 101 aa9.36□□□□□ -0.91
YBX1-202ENST00000332220 CHKB-CPT1BH3BT56 60 aa9.34□□□□□ -0.91
YBX1-202ENST00000332220 H7BZZ5 65 aa9.33□□□□□ -0.92
YBX1-202ENST00000332220 KRTAP19-8Q3LI54 63 aa9.32□□□□□ -0.92
YBX1-202ENST00000332220 P0C880 135 aa9.31□□□□□ -0.92
YBX1-202ENST00000332220 SPTSSBQ8NFR3 76 aa9.3□□□□□ -0.92
YBX1-202ENST00000332220 MT1BP07438 61 aa9.29□□□□□ -0.92
YBX1-202ENST00000332220 KRTAP19-6Q3LI70 58 aa9.29□□□□□ -0.92
YBX1-202ENST00000332220 KRTAP3-2Q9BYR7 98 aa9.29□□□□□ -0.92
YBX1-202ENST00000332220 Q5VV11 94 aa9.26□□□□□ -0.93
YBX1-202ENST00000332220 FCGBPQ9Y6R7 5405 aaPredicted RBP9.25□□□□□ -0.93
YBX1-202ENST00000332220 CCDC179H3BU77 68 aa9.24□□□□□ -0.93
YBX1-202ENST00000332220 COA5Q86WW8 74 aa9.22□□□□□ -0.93
YBX1-202ENST00000332220 R4GN34 69 aa9.14□□□□□ -0.95
YBX1-202ENST00000332220 M0QZ58 72 aa9.11□□□□□ -0.95
YBX1-202ENST00000332220 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.03□□□□□ -0.96
YBX1-202ENST00000332220 A6NN06 94 aa8.98□□□□□ -0.97
YBX1-202ENST00000332220 KRTAP10-5P60370 271 aa8.97□□□□□ -0.97
YBX1-202ENST00000332220 LINC01554Q52M75 96 aa8.96□□□□□ -0.98
YBX1-202ENST00000332220 ATP5EP56381 51 aaPredicted RBP8.94□□□□□ -0.98
YBX1-202ENST00000332220 MACF1Q9UPN3 7388 aaKnown RBP8.91□□□□□ -0.98
YBX1-202ENST00000332220 PLAC4Q8WY50 150 aa8.9□□□□□ -0.98
YBX1-202ENST00000332220 KRTAP13-4Q3LI77 160 aa8.87□□□□□ -0.99
YBX1-202ENST00000332220 TMEM258P61165 79 aa8.86□□□□□ -0.99
YBX1-202ENST00000332220 SEC61GP60059 68 aa8.85□□□□□ -0.99
YBX1-202ENST00000332220 SERP1Q9Y6X1 66 aa8.84□□□□□ -0.99
YBX1-202ENST00000332220 KRTAP9-7A8MTY7 169 aa8.8□□□□□ -1
YBX1-202ENST00000332220 MT1XP80297 61 aa8.8□□□□□ -1
YBX1-202ENST00000332220 PRO2289Q9P1D8 64 aa8.72□□□□□ -1.01
YBX1-202ENST00000332220 A0A1B0GU69 56 aa8.71□□□□□ -1.02
YBX1-202ENST00000332220 A0A1B0GU33 70 aa8.7□□□□□ -1.02
YBX1-202ENST00000332220 SYNE2Q8WXH0 6885 aaKnown RBP8.7□□□□□ -1.02
YBX1-202ENST00000332220 SPATA8Q6RVD6 105 aa8.67□□□□□ -1.02
YBX1-202ENST00000332220 A0A0D9SG42 100 aa8.6□□□□□ -1.03
YBX1-202ENST00000332220 LINC01558Q9Y6Z2 57 aa8.6□□□□□ -1.03
YBX1-202ENST00000332220 KRTAP6-3Q3LI67 103 aa8.56□□□□□ -1.04
YBX1-202ENST00000332220 PRR15LQ9BU68 103 aa8.53□□□□□ -1.04
YBX1-202ENST00000332220 PCP4P48539 62 aa8.5□□□□□ -1.05
YBX1-202ENST00000332220 KRTAP12-2P59991 146 aa8.48□□□□□ -1.05
YBX1-202ENST00000332220 CAMK2N1Q7Z7J9 78 aa8.46□□□□□ -1.06
YBX1-202ENST00000332220 KRTAP12-1P59990 96 aa8.45□□□□□ -1.06
YBX1-202ENST00000332220 SMIM26A0A096LP01 95 aa8.44□□□□□ -1.06
YBX1-202ENST00000332220 A8MU10 97 aa8.44□□□□□ -1.06
YBX1-202ENST00000332220 SPINT4Q6UDR6 99 aa8.44□□□□□ -1.06
YBX1-202ENST00000332220 KMT2DO14686 5537 aa8.43□□□□□ -1.06
YBX1-202ENST00000332220 KRTAP10-7P60409 375 aaPredicted RBP8.41□□□□□ -1.06
YBX1-202ENST00000332220 KRTAP5-9P26371 169 aa8.34□□□□□ -1.07
YBX1-202ENST00000332220 KRTAP10-12P60413 245 aa8.34□□□□□ -1.07
YBX1-202ENST00000332220 KRTAP4-8A0A0G2JLE6 195 aa8.31□□□□□ -1.08
YBX1-202ENST00000332220 KRTAP4-8Q9BYQ9 185 aa8.31□□□□□ -1.08
YBX1-202ENST00000332220 UQCR11O14957 56 aa8.28□□□□□ -1.08
YBX1-202ENST00000332220 Q1T7F1 81 aa8.28□□□□□ -1.08
YBX1-202ENST00000332220 KRTAP8-1Q8IUC2 63 aa8.27□□□□□ -1.09
YBX1-202ENST00000332220 V9GYY9 64 aa8.27□□□□□ -1.09
YBX1-202ENST00000332220 MUC12Q9UKN1 5478 aa8.24□□□□□ -1.09
YBX1-202ENST00000332220 PSPHP1O15172 72 aa8.23□□□□□ -1.09
YBX1-202ENST00000332220 RPS28P62857 69 aaKnown RBP8.18□□□□□ -1.1
YBX1-202ENST00000332220 SPRR2FQ96RM1 72 aa8.18□□□□□ -1.1
YBX1-202ENST00000332220 NEBP20929 6669 aa8.17□□□□□ -1.1
YBX1-202ENST00000332220 MIR22HGQ0VDD5 57 aa8.14□□□□□ -1.11
YBX1-202ENST00000332220 C10orf95Q9H7T3 257 aa8.06□□□□□ -1.12
YBX1-202ENST00000332220 MDN1Q9NU22 5596 aa8.04□□□□□ -1.12
YBX1-202ENST00000332220 SPRR2EP22531 72 aa7.97□□□□□ -1.13
YBX1-202ENST00000332220 SPRR2BP35325 72 aa7.97□□□□□ -1.13
YBX1-202ENST00000332220 SPRR2AP35326 72 aa7.97□□□□□ -1.13
YBX1-202ENST00000332220 A6NED7 52 aa7.95□□□□□ -1.14
YBX1-202ENST00000332220 LCE1AQ5T7P2 110 aa7.93□□□□□ -1.14
YBX1-202ENST00000332220 TNP1P09430 55 aa7.9□□□□□ -1.14
YBX1-202ENST00000332220 K7ERS5 55 aa7.86□□□□□ -1.15
YBX1-202ENST00000332220 KRTAP19-7Q3SYF9 63 aa7.86□□□□□ -1.15
YBX1-202ENST00000332220 LCE3AQ5TA76 89 aa7.79□□□□□ -1.16
YBX1-202ENST00000332220 MT1EP04732 61 aa7.77□□□□□ -1.17
YBX1-202ENST00000332220 KRTAP19-5Q3LI72 72 aa7.76□□□□□ -1.17
YBX1-202ENST00000332220 KRTAP20-1Q3LI63 56 aa7.74□□□□□ -1.17
YBX1-202ENST00000332220 SPRR2DP22532 72 aa7.7□□□□□ -1.18
YBX1-202ENST00000332220 CDC42SE1Q9NRR8 79 aa7.67□□□□□ -1.18
YBX1-202ENST00000332220 KRTAP25-1Q3LHN0 102 aa7.65□□□□□ -1.18
YBX1-202ENST00000332220 KRTAP2-3P0C7H8 128 aa7.63□□□□□ -1.19
YBX1-202ENST00000332220 KRTAP2-4Q9BYR9 128 aa7.63□□□□□ -1.19
YBX1-202ENST00000332220 KRTAP19-3Q7Z4W3 81 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms