RNA–Protein interactions for RNA: ENST00000328354.10

CHEK2-201, Transcript of checkpoint kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHEK2, Length 1,867 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-201ENST00000328354 H1FX-AS1Q4G0G2 97 aa7.16□□□□□ -1.26
CHEK2-201ENST00000328354 RBM12B-AS1Q9P1G2 102 aa7.16□□□□□ -1.26
CHEK2-201ENST00000328354 UBR4Q5T4S7 5183 aa7.16□□□□□ -1.26
CHEK2-201ENST00000328354 BRK1Q8WUW1 75 aa7.15□□□□□ -1.26
CHEK2-201ENST00000328354 KRTAP3-3Q9BYR6 98 aa7.14□□□□□ -1.27
CHEK2-201ENST00000328354 LCA10Q71F78 164 aa7.13□□□□□ -1.27
CHEK2-201ENST00000328354 S4R3F8 94 aa7.13□□□□□ -1.27
CHEK2-201ENST00000328354 LCE2DQ5TA82 110 aaPredicted RBP7.12□□□□□ -1.27
CHEK2-201ENST00000328354 A6NED7 52 aa7.11□□□□□ -1.27
CHEK2-201ENST00000328354 KRTAP4-1Q9BYQ7 146 aa7.11□□□□□ -1.27
CHEK2-201ENST00000328354 PRO0628Q9UI54 55 aa7.11□□□□□ -1.27
CHEK2-201ENST00000328354 MUC17Q685J3 4493 aa7.09□□□□□ -1.27
CHEK2-201ENST00000328354 SEC61GP60059 68 aa7.09□□□□□ -1.27
CHEK2-201ENST00000328354 SVIPQ8NHG7 77 aa7.07□□□□□ -1.28
CHEK2-201ENST00000328354 CDC42SE1Q9NRR8 79 aa7.04□□□□□ -1.28
CHEK2-201ENST00000328354 A8MU10 97 aa7.02□□□□□ -1.29
CHEK2-201ENST00000328354 UQCR11O14957 56 aa7.01□□□□□ -1.29
CHEK2-201ENST00000328354 KRTAP19-2Q3LHN2 52 aa6.98□□□□□ -1.29
CHEK2-201ENST00000328354 RNF213Q63HN8 5207 aa6.98□□□□□ -1.29
CHEK2-201ENST00000328354 SPATA8Q6RVD6 105 aa6.97□□□□□ -1.29
CHEK2-201ENST00000328354 CSAG1Q6PB30 78 aa6.95□□□□□ -1.3
CHEK2-201ENST00000328354 MIR22HGQ0VDD5 57 aa6.94□□□□□ -1.3
CHEK2-201ENST00000328354 A0A1B0GU33 70 aa6.93□□□□□ -1.3
CHEK2-201ENST00000328354 KRTAP10-6P60371 365 aaPredicted RBP6.93□□□□□ -1.3
CHEK2-201ENST00000328354 KRTAP3-2Q9BYR7 98 aa6.93□□□□□ -1.3
CHEK2-201ENST00000328354 MUC2Q02817 5179 aa6.88□□□□□ -1.31
CHEK2-201ENST00000328354 H0YAA0 97 aa6.87□□□□□ -1.31
CHEK2-201ENST00000328354 P0C880 135 aa6.83□□□□□ -1.32
CHEK2-201ENST00000328354 ADM2Q7Z4H4 148 aa6.83□□□□□ -1.32
CHEK2-201ENST00000328354 FLGP20930 4061 aaPredicted RBP6.78□□□□□ -1.32
CHEK2-201ENST00000328354 PMAIP1Q13794 54 aa6.77□□□□□ -1.33
CHEK2-201ENST00000328354 KRTAP13-4Q3LI77 160 aa6.75□□□□□ -1.33
CHEK2-201ENST00000328354 A6NN06 94 aa6.75□□□□□ -1.33
CHEK2-201ENST00000328354 LCE2CQ5TA81 110 aa6.74□□□□□ -1.33
CHEK2-201ENST00000328354 M0QZ58 72 aa6.68□□□□□ -1.34
CHEK2-201ENST00000328354 FAT4Q6V0I7 4981 aa6.65□□□□□ -1.34
CHEK2-201ENST00000328354 LCE2AQ5TA79 106 aaPredicted RBP6.63□□□□□ -1.35
CHEK2-201ENST00000328354 A0A0D9SG42 100 aa6.6□□□□□ -1.35
CHEK2-201ENST00000328354 K7ERS5 55 aa6.58□□□□□ -1.36
CHEK2-201ENST00000328354 MT1HP80294 61 aa6.58□□□□□ -1.36
CHEK2-201ENST00000328354 LORP23490 312 aaPredicted RBP6.57□□□□□ -1.36
CHEK2-201ENST00000328354 R4GN34 69 aa6.57□□□□□ -1.36
CHEK2-201ENST00000328354 KTN1-AS1Q86SY8 53 aa6.56□□□□□ -1.36
CHEK2-201ENST00000328354 KRTAP12-1P59990 96 aa6.51□□□□□ -1.37
CHEK2-201ENST00000328354 KRTAP12-2P59991 146 aa6.49□□□□□ -1.37
CHEK2-201ENST00000328354 CRIPTQ9P021 101 aa6.48□□□□□ -1.37
CHEK2-201ENST00000328354 M0R2T5 61 aa6.47□□□□□ -1.37
CHEK2-201ENST00000328354 LINC01554Q52M75 96 aa6.43□□□□□ -1.38
CHEK2-201ENST00000328354 SPINT4Q6UDR6 99 aa6.43□□□□□ -1.38
CHEK2-201ENST00000328354 KRTAP9-8Q9BYQ0 159 aa6.36□□□□□ -1.39
CHEK2-201ENST00000328354 MT2AP02795 61 aa6.35□□□□□ -1.39
CHEK2-201ENST00000328354 ROMO1P60602 79 aa6.35□□□□□ -1.39
CHEK2-201ENST00000328354 MT1FP04733 61 aa6.32□□□□□ -1.4
CHEK2-201ENST00000328354 PRAC1Q96KF2 57 aa6.32□□□□□ -1.4
CHEK2-201ENST00000328354 SPRR2GQ9BYE4 73 aa6.32□□□□□ -1.4
CHEK2-201ENST00000328354 KRTAP9-2Q9BYQ4 174 aa6.32□□□□□ -1.4
CHEK2-201ENST00000328354 KRTAP19-1Q8IUB9 90 aa6.29□□□□□ -1.4
CHEK2-201ENST00000328354 KRTAP10-10P60014 251 aa6.28□□□□□ -1.4
CHEK2-201ENST00000328354 KRTAP25-1Q3LHN0 102 aa6.17□□□□□ -1.42
CHEK2-201ENST00000328354 CAMK2N1Q7Z7J9 78 aa6.16□□□□□ -1.42
CHEK2-201ENST00000328354 C10orf95Q9H7T3 257 aa6.15□□□□□ -1.43
CHEK2-201ENST00000328354 KRTAP19-8Q3LI54 63 aa6.14□□□□□ -1.43
CHEK2-201ENST00000328354 KRTAP9-3Q9BYQ3 159 aa6.13□□□□□ -1.43
CHEK2-201ENST00000328354 PLAC4Q8WY50 150 aa6.11□□□□□ -1.43
CHEK2-201ENST00000328354 LOC100996750A0A140TA64 210 aa6.09□□□□□ -1.44
CHEK2-201ENST00000328354 KRTAP4-6Q9BYQ5 205 aa6.09□□□□□ -1.44
CHEK2-201ENST00000328354 KRTAP9-6A0A140TA67 174 aa6.04□□□□□ -1.44
CHEK2-201ENST00000328354 MT1BP07438 61 aa6.03□□□□□ -1.44
CHEK2-201ENST00000328354 FSIP2Q5CZC0 6907 aa6.01□□□□□ -1.45
CHEK2-201ENST00000328354 CRCT1Q9UGL9 99 aa5.99□□□□□ -1.45
CHEK2-201ENST00000328354 LCE2BO14633 110 aa5.92□□□□□ -1.46
CHEK2-201ENST00000328354 TNP1P09430 55 aa5.91□□□□□ -1.46
CHEK2-201ENST00000328354 KRTAP10-5P60370 271 aa5.87□□□□□ -1.47
CHEK2-201ENST00000328354 MT1XP80297 61 aa5.87□□□□□ -1.47
CHEK2-201ENST00000328354 PP632Q6XCG6 107 aa5.85□□□□□ -1.47
CHEK2-201ENST00000328354 KRTAP23-1A1A580 65 aa5.83□□□□□ -1.48
CHEK2-201ENST00000328354 USH2AO75445 5202 aa5.8□□□□□ -1.48
CHEK2-201ENST00000328354 PRO2289Q9P1D8 64 aa5.76□□□□□ -1.49
CHEK2-201ENST00000328354 SSPOA2VEC9 5147 aa5.72□□□□□ -1.49
CHEK2-201ENST00000328354 KRTAP10-7P60409 375 aaPredicted RBP5.64□□□□□ -1.51
CHEK2-201ENST00000328354 LCE3AQ5TA76 89 aa5.64□□□□□ -1.51
CHEK2-201ENST00000328354 KRTAP19-6Q3LI70 58 aa5.63□□□□□ -1.51
CHEK2-201ENST00000328354 KRTAP10-12P60413 245 aa5.61□□□□□ -1.51
CHEK2-201ENST00000328354 FCGBPQ9Y6R7 5405 aaPredicted RBP5.6□□□□□ -1.51
CHEK2-201ENST00000328354 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.58□□□□□ -1.52
CHEK2-201ENST00000328354 KRTAP8-1Q8IUC2 63 aa5.56□□□□□ -1.52
CHEK2-201ENST00000328354 KRTAP15-1Q3LI76 137 aa5.51□□□□□ -1.53
CHEK2-201ENST00000328354 KRTAP9-7A8MTY7 169 aa5.45□□□□□ -1.54
CHEK2-201ENST00000328354 KRTAP12-3P60328 96 aa5.41□□□□□ -1.54
CHEK2-201ENST00000328354 MACF1Q9UPN3 7388 aaKnown RBP5.39□□□□□ -1.55
CHEK2-201ENST00000328354 KRTAP4-8A0A0G2JLE6 195 aa5.37□□□□□ -1.55
CHEK2-201ENST00000328354 KRTAP4-8Q9BYQ9 185 aa5.37□□□□□ -1.55
CHEK2-201ENST00000328354 KRTAP19-5Q3LI72 72 aa5.32□□□□□ -1.56
CHEK2-201ENST00000328354 H3BS24 57 aa5.32□□□□□ -1.56
CHEK2-201ENST00000328354 SYNE2Q8WXH0 6885 aaKnown RBP5.28□□□□□ -1.56
CHEK2-201ENST00000328354 SPRR5A0A1B0GTR4 108 aa5.28□□□□□ -1.56
CHEK2-201ENST00000328354 KMT2DO14686 5537 aa5.28□□□□□ -1.56
CHEK2-201ENST00000328354 KRTAP19-7Q3SYF9 63 aa5.24□□□□□ -1.57
CHEK2-201ENST00000328354 KRTAP6-3Q3LI67 103 aa5.24□□□□□ -1.57
CHEK2-201ENST00000328354 MT1EP04732 61 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms