RNA–Protein interactions for RNA: ENST00000328270.3

TNRC18-201, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 5

Gene TNRC18, Length 1,220 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-201ENST00000328270 KRTAP19-6Q3LI70 58 aa9.88□□□□□ -0.83
TNRC18-201ENST00000328270 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.87□□□□□ -0.83
TNRC18-201ENST00000328270 A8MUN3 132 aa9.83□□□□□ -0.84
TNRC18-201ENST00000328270 SCGB1A1P11684 91 aa9.83□□□□□ -0.84
TNRC18-201ENST00000328270 H3BPC8 53 aa9.79□□□□□ -0.84
TNRC18-201ENST00000328270 NDUFC1O43677 76 aa9.79□□□□□ -0.84
TNRC18-201ENST00000328270 K7ERU9 68 aa9.77□□□□□ -0.85
TNRC18-201ENST00000328270 IMUPQ9GZP8 106 aa9.76□□□□□ -0.85
TNRC18-201ENST00000328270 SPRR2GQ9BYE4 73 aa9.75□□□□□ -0.85
TNRC18-201ENST00000328270 MT-ATP8P03928 68 aa9.74□□□□□ -0.85
TNRC18-201ENST00000328270 KRTAP9-7A8MTY7 169 aa9.7□□□□□ -0.86
TNRC18-201ENST00000328270 MACF1Q9UPN3 7388 aaKnown RBP9.68□□□□□ -0.86
TNRC18-201ENST00000328270 KRTAP19-8Q3LI54 63 aa9.67□□□□□ -0.86
TNRC18-201ENST00000328270 MT1BP07438 61 aa9.66□□□□□ -0.86
TNRC18-201ENST00000328270 Q5VV11 94 aa9.66□□□□□ -0.86
TNRC18-201ENST00000328270 H0YAA0 97 aa9.65□□□□□ -0.86
TNRC18-201ENST00000328270 CRIPTQ9P021 101 aa9.64□□□□□ -0.87
TNRC18-201ENST00000328270 DMAC1Q96GE9 116 aa9.62□□□□□ -0.87
TNRC18-201ENST00000328270 TRAV7A0A075B6U4 112 aa9.59□□□□□ -0.87
TNRC18-201ENST00000328270 SMIM20Q8N5G0 67 aa9.59□□□□□ -0.87
TNRC18-201ENST00000328270 ADM2Q7Z4H4 148 aa9.57□□□□□ -0.88
TNRC18-201ENST00000328270 A6NN06 94 aa9.49□□□□□ -0.89
TNRC18-201ENST00000328270 SYNE2Q8WXH0 6885 aaKnown RBP9.46□□□□□ -0.9
TNRC18-201ENST00000328270 ACYP2P14621 99 aa9.4□□□□□ -0.9
TNRC18-201ENST00000328270 KRTAP10-5P60370 271 aa9.4□□□□□ -0.9
TNRC18-201ENST00000328270 SNURFQ9Y675 71 aa9.39□□□□□ -0.91
TNRC18-201ENST00000328270 P0C880 135 aa9.38□□□□□ -0.91
TNRC18-201ENST00000328270 C20orf197Q8N268 126 aa9.36□□□□□ -0.91
TNRC18-201ENST00000328270 SERP2Q8N6R1 65 aa9.31□□□□□ -0.92
TNRC18-201ENST00000328270 KRTAP3-2Q9BYR7 98 aa9.31□□□□□ -0.92
TNRC18-201ENST00000328270 R4GN34 69 aa9.31□□□□□ -0.92
TNRC18-201ENST00000328270 KRTAP6-3Q3LI67 103 aa9.27□□□□□ -0.93
TNRC18-201ENST00000328270 SPTSSBQ8NFR3 76 aa9.26□□□□□ -0.93
TNRC18-201ENST00000328270 M0QZ58 72 aa9.25□□□□□ -0.93
TNRC18-201ENST00000328270 CHKB-CPT1BH3BT56 60 aa9.24□□□□□ -0.93
TNRC18-201ENST00000328270 SPANXA2-OT1Q8N9U9 137 aa9.23□□□□□ -0.93
TNRC18-201ENST00000328270 PLAC4Q8WY50 150 aa9.18□□□□□ -0.94
TNRC18-201ENST00000328270 LINC01554Q52M75 96 aa9.11□□□□□ -0.95
TNRC18-201ENST00000328270 MT1XP80297 61 aa9.1□□□□□ -0.95
TNRC18-201ENST00000328270 PRO2289Q9P1D8 64 aa9.1□□□□□ -0.95
TNRC18-201ENST00000328270 COX7CP15954 63 aa9.07□□□□□ -0.96
TNRC18-201ENST00000328270 MUC12Q9UKN1 5478 aa8.98□□□□□ -0.97
TNRC18-201ENST00000328270 COA5Q86WW8 74 aa8.98□□□□□ -0.97
TNRC18-201ENST00000328270 KRTAP5-9P26371 169 aa8.92□□□□□ -0.98
TNRC18-201ENST00000328270 CYSTM1Q9H1C7 97 aa8.92□□□□□ -0.98
TNRC18-201ENST00000328270 KMT2DO14686 5537 aa8.92□□□□□ -0.98
TNRC18-201ENST00000328270 NEBP20929 6669 aa8.91□□□□□ -0.98
TNRC18-201ENST00000328270 H7BZZ5 65 aa8.9□□□□□ -0.98
TNRC18-201ENST00000328270 KRTAP12-2P59991 146 aa8.84□□□□□ -0.99
TNRC18-201ENST00000328270 KRTAP13-4Q3LI77 160 aa8.83□□□□□ -1
TNRC18-201ENST00000328270 ANAPC13Q9BS18 74 aa8.82□□□□□ -1
TNRC18-201ENST00000328270 MDN1Q9NU22 5596 aa8.76□□□□□ -1.01
TNRC18-201ENST00000328270 SEC61GP60059 68 aa8.75□□□□□ -1.01
TNRC18-201ENST00000328270 SERP1Q9Y6X1 66 aa8.73□□□□□ -1.01
TNRC18-201ENST00000328270 KRTAP8-1Q8IUC2 63 aa8.72□□□□□ -1.01
TNRC18-201ENST00000328270 SPRR2FQ96RM1 72 aa8.71□□□□□ -1.02
TNRC18-201ENST00000328270 KRTAP10-7P60409 375 aaPredicted RBP8.68□□□□□ -1.02
TNRC18-201ENST00000328270 KRTAP4-8A0A0G2JLE6 195 aa8.65□□□□□ -1.02
TNRC18-201ENST00000328270 CCDC179H3BU77 68 aa8.65□□□□□ -1.02
TNRC18-201ENST00000328270 KRTAP4-8Q9BYQ9 185 aa8.65□□□□□ -1.02
TNRC18-201ENST00000328270 KRTAP10-12P60413 245 aa8.63□□□□□ -1.03
TNRC18-201ENST00000328270 A0A1B0GU33 70 aa8.59□□□□□ -1.03
TNRC18-201ENST00000328270 CAMK2N1Q7Z7J9 78 aa8.59□□□□□ -1.03
TNRC18-201ENST00000328270 SPATA8Q6RVD6 105 aa8.58□□□□□ -1.04
TNRC18-201ENST00000328270 A0A0D9SG42 100 aa8.57□□□□□ -1.04
TNRC18-201ENST00000328270 SPRR2EP22531 72 aa8.54□□□□□ -1.04
TNRC18-201ENST00000328270 SPRR2BP35325 72 aa8.54□□□□□ -1.04
TNRC18-201ENST00000328270 SPRR2AP35326 72 aa8.54□□□□□ -1.04
TNRC18-201ENST00000328270 KRTAP20-1Q3LI63 56 aa8.52□□□□□ -1.05
TNRC18-201ENST00000328270 A0A1B0GU69 56 aa8.51□□□□□ -1.05
TNRC18-201ENST00000328270 ATP5EP56381 51 aaPredicted RBP8.5□□□□□ -1.05
TNRC18-201ENST00000328270 LCE1AQ5T7P2 110 aa8.45□□□□□ -1.06
TNRC18-201ENST00000328270 SPINT4Q6UDR6 99 aa8.43□□□□□ -1.06
TNRC18-201ENST00000328270 KRTAP12-1P59990 96 aa8.4□□□□□ -1.06
TNRC18-201ENST00000328270 SMIM26A0A096LP01 95 aa8.35□□□□□ -1.07
TNRC18-201ENST00000328270 KRTAP2-3P0C7H8 128 aa8.33□□□□□ -1.08
TNRC18-201ENST00000328270 KRTAP2-4Q9BYR9 128 aa8.33□□□□□ -1.08
TNRC18-201ENST00000328270 TMEM258P61165 79 aa8.32□□□□□ -1.08
TNRC18-201ENST00000328270 A8MU10 97 aa8.3□□□□□ -1.08
TNRC18-201ENST00000328270 PRR15LQ9BU68 103 aa8.3□□□□□ -1.08
TNRC18-201ENST00000328270 SPRR2DP22532 72 aa8.25□□□□□ -1.09
TNRC18-201ENST00000328270 LINC01558Q9Y6Z2 57 aa8.25□□□□□ -1.09
TNRC18-201ENST00000328270 KRTAP19-7Q3SYF9 63 aa8.12□□□□□ -1.11
TNRC18-201ENST00000328270 KRTAP2-2Q9BYT5 123 aa8.08□□□□□ -1.12
TNRC18-201ENST00000328270 KRTAP2-1Q9BYU5 128 aa8.08□□□□□ -1.12
TNRC18-201ENST00000328270 MT1EP04732 61 aa8.05□□□□□ -1.12
TNRC18-201ENST00000328270 UQCR11O14957 56 aa8.02□□□□□ -1.13
TNRC18-201ENST00000328270 C10orf95Q9H7T3 257 aa8.02□□□□□ -1.13
TNRC18-201ENST00000328270 LCE3BQ5TA77 95 aa8.01□□□□□ -1.13
TNRC18-201ENST00000328270 KRTAP19-5Q3LI72 72 aa7.97□□□□□ -1.13
TNRC18-201ENST00000328270 TNP1P09430 55 aa7.96□□□□□ -1.14
TNRC18-201ENST00000328270 LCE5AQ5TCM9 118 aa7.94□□□□□ -1.14
TNRC18-201ENST00000328270 KRTAP19-3Q7Z4W3 81 aa7.94□□□□□ -1.14
TNRC18-201ENST00000328270 LCE3AQ5TA76 89 aa7.87□□□□□ -1.15
TNRC18-201ENST00000328270 MIR22HGQ0VDD5 57 aa7.86□□□□□ -1.15
TNRC18-201ENST00000328270 V9GYY9 64 aa7.84□□□□□ -1.15
TNRC18-201ENST00000328270 DSTQ03001 7570 aaKnown RBP7.82□□□□□ -1.16
TNRC18-201ENST00000328270 PSPHP1O15172 72 aa7.8□□□□□ -1.16
TNRC18-201ENST00000328270 Q1T7F1 81 aa7.8□□□□□ -1.16
TNRC18-201ENST00000328270 MT1GP13640 62 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms