RNA–Protein interactions for RNA: ENST00000328024.10

RAB11B-201, Transcript of RAB11B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB11B, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11B-201ENST00000328024 MT1HP80294 61 aa10.26□□□□□ -0.77
RAB11B-201ENST00000328024 A8MUN3 132 aa10.26□□□□□ -0.77
RAB11B-201ENST00000328024 SPINK7P58062 85 aa10.26□□□□□ -0.77
RAB11B-201ENST00000328024 C7orf65Q6ZTY9 151 aa10.26□□□□□ -0.77
RAB11B-201ENST00000328024 IGKV2D-30A0A075B6S6 120 aa10.25□□□□□ -0.77
RAB11B-201ENST00000328024 BRK1Q8WUW1 75 aa10.25□□□□□ -0.77
RAB11B-201ENST00000328024 COX6B2Q6YFQ2 88 aa10.24□□□□□ -0.77
RAB11B-201ENST00000328024 FLGP20930 4061 aaPredicted RBP10.23□□□□□ -0.77
RAB11B-201ENST00000328024 Q5VV11 94 aa10.23□□□□□ -0.77
RAB11B-201ENST00000328024 CHKB-CPT1BH3BT56 60 aa10.21□□□□□ -0.77
RAB11B-201ENST00000328024 PRR15LQ9BU68 103 aa10.21□□□□□ -0.78
RAB11B-201ENST00000328024 RBM12B-AS1Q9P1G2 102 aa10.11□□□□□ -0.79
RAB11B-201ENST00000328024 M0R2T5 61 aa10.03□□□□□ -0.8
RAB11B-201ENST00000328024 A6NED7 52 aa10.02□□□□□ -0.81
RAB11B-201ENST00000328024 KRTAP10-6P60371 365 aaPredicted RBP9.99□□□□□ -0.81
RAB11B-201ENST00000328024 SPTSSBQ8NFR3 76 aa9.99□□□□□ -0.81
RAB11B-201ENST00000328024 LORP23490 312 aaPredicted RBP9.98□□□□□ -0.81
RAB11B-201ENST00000328024 CDC42SE1Q9NRR8 79 aa9.97□□□□□ -0.81
RAB11B-201ENST00000328024 A0A1B0GU69 56 aa9.95□□□□□ -0.82
RAB11B-201ENST00000328024 LCA10Q71F78 164 aa9.9□□□□□ -0.82
RAB11B-201ENST00000328024 H1FX-AS1Q4G0G2 97 aa9.83□□□□□ -0.84
RAB11B-201ENST00000328024 SEC61GP60059 68 aa9.82□□□□□ -0.84
RAB11B-201ENST00000328024 KRTAP3-1Q9BYR8 98 aa9.82□□□□□ -0.84
RAB11B-201ENST00000328024 KRTAP9-8Q9BYQ0 159 aa9.8□□□□□ -0.84
RAB11B-201ENST00000328024 UQCR11O14957 56 aa9.78□□□□□ -0.84
RAB11B-201ENST00000328024 KRTAP9-2Q9BYQ4 174 aa9.78□□□□□ -0.84
RAB11B-201ENST00000328024 A8MU10 97 aa9.75□□□□□ -0.85
RAB11B-201ENST00000328024 PMAIP1Q13794 54 aa9.75□□□□□ -0.85
RAB11B-201ENST00000328024 SPATA8Q6RVD6 105 aa9.74□□□□□ -0.85
RAB11B-201ENST00000328024 LCE2DQ5TA82 110 aaPredicted RBP9.71□□□□□ -0.85
RAB11B-201ENST00000328024 MT2AP02795 61 aa9.68□□□□□ -0.86
RAB11B-201ENST00000328024 MIR22HGQ0VDD5 57 aa9.67□□□□□ -0.86
RAB11B-201ENST00000328024 MT1FP04733 61 aa9.62□□□□□ -0.87
RAB11B-201ENST00000328024 A6NN06 94 aa9.6□□□□□ -0.87
RAB11B-201ENST00000328024 S4R3F8 94 aa9.57□□□□□ -0.88
RAB11B-201ENST00000328024 KRTAP10-10P60014 251 aa9.52□□□□□ -0.88
RAB11B-201ENST00000328024 FSIP2Q5CZC0 6907 aa9.51□□□□□ -0.89
RAB11B-201ENST00000328024 KRTAP3-3Q9BYR6 98 aa9.51□□□□□ -0.89
RAB11B-201ENST00000328024 A0A1B0GU33 70 aa9.5□□□□□ -0.89
RAB11B-201ENST00000328024 KTN1-AS1Q86SY8 53 aa9.5□□□□□ -0.89
RAB11B-201ENST00000328024 KRTAP9-3Q9BYQ3 159 aa9.47□□□□□ -0.89
RAB11B-201ENST00000328024 CSAG1Q6PB30 78 aa9.44□□□□□ -0.9
RAB11B-201ENST00000328024 USH2AO75445 5202 aa9.39□□□□□ -0.91
RAB11B-201ENST00000328024 H0YAA0 97 aa9.37□□□□□ -0.91
RAB11B-201ENST00000328024 LCE2BO14633 110 aa9.35□□□□□ -0.91
RAB11B-201ENST00000328024 KRTAP9-6A0A140TA67 174 aa9.29□□□□□ -0.92
RAB11B-201ENST00000328024 CRCT1Q9UGL9 99 aa9.29□□□□□ -0.92
RAB11B-201ENST00000328024 SSPOA2VEC9 5147 aa9.25□□□□□ -0.93
RAB11B-201ENST00000328024 KRTAP3-2Q9BYR7 98 aa9.24□□□□□ -0.93
RAB11B-201ENST00000328024 K7ERS5 55 aa9.23□□□□□ -0.93
RAB11B-201ENST00000328024 KRTAP19-1Q8IUB9 90 aa9.17□□□□□ -0.94
RAB11B-201ENST00000328024 ADM2Q7Z4H4 148 aa9.1□□□□□ -0.95
RAB11B-201ENST00000328024 P0C880 135 aa9.07□□□□□ -0.96
RAB11B-201ENST00000328024 SPRR2GQ9BYE4 73 aa9.07□□□□□ -0.96
RAB11B-201ENST00000328024 M0QZ58 72 aa9.05□□□□□ -0.96
RAB11B-201ENST00000328024 KRTAP13-4Q3LI77 160 aa9.03□□□□□ -0.96
RAB11B-201ENST00000328024 CRIPTQ9P021 101 aa8.98□□□□□ -0.97
RAB11B-201ENST00000328024 KRTAP19-8Q3LI54 63 aa8.96□□□□□ -0.98
RAB11B-201ENST00000328024 PRAC1Q96KF2 57 aa8.96□□□□□ -0.98
RAB11B-201ENST00000328024 FCGBPQ9Y6R7 5405 aaPredicted RBP8.94□□□□□ -0.98
RAB11B-201ENST00000328024 MT1BP07438 61 aa8.94□□□□□ -0.98
RAB11B-201ENST00000328024 KRTAP19-6Q3LI70 58 aa8.91□□□□□ -0.98
RAB11B-201ENST00000328024 A0A0D9SG42 100 aa8.91□□□□□ -0.98
RAB11B-201ENST00000328024 ROMO1P60602 79 aa8.86□□□□□ -0.99
RAB11B-201ENST00000328024 KRTAP12-1P59990 96 aa8.78□□□□□ -1
RAB11B-201ENST00000328024 R4GN34 69 aa8.77□□□□□ -1.01
RAB11B-201ENST00000328024 KRTAP25-1Q3LHN0 102 aa8.76□□□□□ -1.01
RAB11B-201ENST00000328024 KRTAP12-2P59991 146 aa8.74□□□□□ -1.01
RAB11B-201ENST00000328024 LINC01554Q52M75 96 aa8.73□□□□□ -1.01
RAB11B-201ENST00000328024 SPINT4Q6UDR6 99 aa8.72□□□□□ -1.01
RAB11B-201ENST00000328024 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.65□□□□□ -1.02
RAB11B-201ENST00000328024 MACF1Q9UPN3 7388 aaKnown RBP8.63□□□□□ -1.03
RAB11B-201ENST00000328024 KRTAP10-5P60370 271 aa8.61□□□□□ -1.03
RAB11B-201ENST00000328024 PLAC4Q8WY50 150 aa8.53□□□□□ -1.04
RAB11B-201ENST00000328024 SYNE2Q8WXH0 6885 aaKnown RBP8.49□□□□□ -1.05
RAB11B-201ENST00000328024 MT1XP80297 61 aa8.47□□□□□ -1.05
RAB11B-201ENST00000328024 KRTAP9-7A8MTY7 169 aa8.4□□□□□ -1.06
RAB11B-201ENST00000328024 PRO2289Q9P1D8 64 aa8.34□□□□□ -1.07
RAB11B-201ENST00000328024 CAMK2N1Q7Z7J9 78 aa8.27□□□□□ -1.08
RAB11B-201ENST00000328024 C10orf95Q9H7T3 257 aa8.27□□□□□ -1.08
RAB11B-201ENST00000328024 KRTAP6-3Q3LI67 103 aa8.2□□□□□ -1.1
RAB11B-201ENST00000328024 KMT2DO14686 5537 aa8.19□□□□□ -1.1
RAB11B-201ENST00000328024 PP632Q6XCG6 107 aa8.12□□□□□ -1.11
RAB11B-201ENST00000328024 KRTAP10-7P60409 375 aaPredicted RBP8.1□□□□□ -1.11
RAB11B-201ENST00000328024 KRTAP23-1A1A580 65 aa8.02□□□□□ -1.13
RAB11B-201ENST00000328024 KRTAP10-12P60413 245 aa8.02□□□□□ -1.13
RAB11B-201ENST00000328024 KRTAP4-8A0A0G2JLE6 195 aa8.02□□□□□ -1.13
RAB11B-201ENST00000328024 KRTAP4-8Q9BYQ9 185 aa8.02□□□□□ -1.13
RAB11B-201ENST00000328024 MUC12Q9UKN1 5478 aa8.01□□□□□ -1.13
RAB11B-201ENST00000328024 TNP1P09430 55 aa8□□□□□ -1.13
RAB11B-201ENST00000328024 KRTAP5-9P26371 169 aa7.99□□□□□ -1.13
RAB11B-201ENST00000328024 KRTAP8-1Q8IUC2 63 aa7.92□□□□□ -1.14
RAB11B-201ENST00000328024 NEBP20929 6669 aa7.91□□□□□ -1.14
RAB11B-201ENST00000328024 KRTAP15-1Q3LI76 137 aa7.87□□□□□ -1.15
RAB11B-201ENST00000328024 MDN1Q9NU22 5596 aa7.85□□□□□ -1.15
RAB11B-201ENST00000328024 SPRR2FQ96RM1 72 aa7.84□□□□□ -1.15
RAB11B-201ENST00000328024 SPRR2EP22531 72 aa7.63□□□□□ -1.19
RAB11B-201ENST00000328024 SPRR2BP35325 72 aa7.63□□□□□ -1.19
RAB11B-201ENST00000328024 SPRR2AP35326 72 aa7.63□□□□□ -1.19
RAB11B-201ENST00000328024 LCE1AQ5T7P2 110 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms