RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 CRIPTQ9P021 101 aa8.69□□□□□ -1.02
SSH1-201ENST00000326470 KRTAP10-6P60371 365 aaPredicted RBP8.67□□□□□ -1.02
SSH1-201ENST00000326470 KIAA1109Q2LD37 5005 aa8.66□□□□□ -1.02
SSH1-201ENST00000326470 RPL37P61927 97 aaKnown RBP8.65□□□□□ -1.02
SSH1-201ENST00000326470 KRTAP3-3Q9BYR6 98 aa8.64□□□□□ -1.03
SSH1-201ENST00000326470 HSPG2P98160 4391 aa8.63□□□□□ -1.03
SSH1-201ENST00000326470 KRTAP13-4Q3LI77 160 aa8.61□□□□□ -1.03
SSH1-201ENST00000326470 KRTAP3-2Q9BYR7 98 aa8.58□□□□□ -1.04
SSH1-201ENST00000326470 RYR1P21817 5038 aa8.57□□□□□ -1.04
SSH1-201ENST00000326470 KRTAP17-1Q9BYP8 105 aa8.55□□□□□ -1.04
SSH1-201ENST00000326470 A0A0D9SG42 100 aa8.54□□□□□ -1.04
SSH1-201ENST00000326470 DMBT1Q9UGM3 2413 aaPredicted RBP8.53□□□□□ -1.04
SSH1-201ENST00000326470 FAT3Q8TDW7 4589 aa8.53□□□□□ -1.04
SSH1-201ENST00000326470 S4R3F8 94 aa8.51□□□□□ -1.05
SSH1-201ENST00000326470 LRP1Q07954 4544 aaKnown RBP8.5□□□□□ -1.05
SSH1-201ENST00000326470 Q5VSD8 79 aa8.49□□□□□ -1.05
SSH1-201ENST00000326470 KRTAP10-8P60410 259 aa8.48□□□□□ -1.05
SSH1-201ENST00000326470 P0C880 135 aa8.48□□□□□ -1.05
SSH1-201ENST00000326470 TPRXLQ17RH7 258 aa8.47□□□□□ -1.05
SSH1-201ENST00000326470 MYCBP2O75592 4640 aa8.44□□□□□ -1.06
SSH1-201ENST00000326470 TNXBP22105 4242 aa8.43□□□□□ -1.06
SSH1-201ENST00000326470 XP32Q5T750 250 aa8.42□□□□□ -1.06
SSH1-201ENST00000326470 SPINT4Q6UDR6 99 aa8.36□□□□□ -1.07
SSH1-201ENST00000326470 C10orf95Q9H7T3 257 aa8.36□□□□□ -1.07
SSH1-201ENST00000326470 KRTAP12-2P59991 146 aa8.35□□□□□ -1.07
SSH1-201ENST00000326470 KRTAP12-1P59990 96 aa8.28□□□□□ -1.08
SSH1-201ENST00000326470 KRTAP4-5Q9BYR2 181 aa8.28□□□□□ -1.08
SSH1-201ENST00000326470 ABCA13Q86UQ4 5058 aa8.25□□□□□ -1.09
SSH1-201ENST00000326470 BIRC6Q9NR09 4857 aa8.24□□□□□ -1.09
SSH1-201ENST00000326470 KRTAP15-1Q3LI76 137 aa8.22□□□□□ -1.09
SSH1-201ENST00000326470 M0QZ58 72 aa8.19□□□□□ -1.1
SSH1-201ENST00000326470 MT1HL1P0DM35 61 aa8.17□□□□□ -1.1
SSH1-201ENST00000326470 HERC2O95714 4834 aa8.17□□□□□ -1.1
SSH1-201ENST00000326470 A0A0A0MQY5 61 aa8.13□□□□□ -1.11
SSH1-201ENST00000326470 NDUFAF8A1L188 74 aa8.08□□□□□ -1.12
SSH1-201ENST00000326470 LPAP08519 4548 aa8.07□□□□□ -1.12
SSH1-201ENST00000326470 PCLOQ9Y6V0 5065 aa8.04□□□□□ -1.12
SSH1-201ENST00000326470 LRP2P98164 4655 aa7.98□□□□□ -1.13
SSH1-201ENST00000326470 R4GN34 69 aa7.91□□□□□ -1.14
SSH1-201ENST00000326470 HERC1Q15751 4861 aa7.91□□□□□ -1.14
SSH1-201ENST00000326470 J3QL48 77 aa7.87□□□□□ -1.15
SSH1-201ENST00000326470 LORP23490 312 aaPredicted RBP7.77□□□□□ -1.17
SSH1-201ENST00000326470 PLAC4Q8WY50 150 aa7.73□□□□□ -1.17
SSH1-201ENST00000326470 SEC61BP60468 96 aaKnown RBP7.71□□□□□ -1.18
SSH1-201ENST00000326470 MUC17Q685J3 4493 aa7.66□□□□□ -1.18
SSH1-201ENST00000326470 HMCN2Q8NDA2 5059 aa7.62□□□□□ -1.19
SSH1-201ENST00000326470 PP632Q6XCG6 107 aa7.6□□□□□ -1.19
SSH1-201ENST00000326470 MUC2Q02817 5179 aa7.59□□□□□ -1.19
SSH1-201ENST00000326470 KRTAP4-1Q9BYQ7 146 aa7.59□□□□□ -1.19
SSH1-201ENST00000326470 CAMK2N1Q7Z7J9 78 aa7.53□□□□□ -1.2
SSH1-201ENST00000326470 KRTAP19-2Q3LHN2 52 aa7.52□□□□□ -1.2
SSH1-201ENST00000326470 UBR4Q5T4S7 5183 aa7.45□□□□□ -1.22
SSH1-201ENST00000326470 LUZP6Q538Z0 58 aa7.43□□□□□ -1.22
SSH1-201ENST00000326470 RNF213Q63HN8 5207 aa7.41□□□□□ -1.22
SSH1-201ENST00000326470 TNP1P09430 55 aa7.31□□□□□ -1.24
SSH1-201ENST00000326470 KRTAP23-1A1A580 65 aa7.3□□□□□ -1.24
SSH1-201ENST00000326470 FLGP20930 4061 aaPredicted RBP7.27□□□□□ -1.24
SSH1-201ENST00000326470 FAT4Q6V0I7 4981 aa7.25□□□□□ -1.25
SSH1-201ENST00000326470 SPRR5A0A1B0GTR4 108 aa7.19□□□□□ -1.26
SSH1-201ENST00000326470 SPRR2GQ9BYE4 73 aa7.02□□□□□ -1.29
SSH1-201ENST00000326470 LCE2CQ5TA81 110 aa7□□□□□ -1.29
SSH1-201ENST00000326470 KRTAP19-1Q8IUB9 90 aa6.96□□□□□ -1.3
SSH1-201ENST00000326470 M0R2T5 61 aa6.89□□□□□ -1.31
SSH1-201ENST00000326470 LCE3AQ5TA76 89 aa6.88□□□□□ -1.31
SSH1-201ENST00000326470 MT1HP80294 61 aa6.86□□□□□ -1.31
SSH1-201ENST00000326470 KRTAP8-1Q8IUC2 63 aa6.74□□□□□ -1.33
SSH1-201ENST00000326470 MT1FP04733 61 aa6.71□□□□□ -1.34
SSH1-201ENST00000326470 MT2AP02795 61 aa6.7□□□□□ -1.34
SSH1-201ENST00000326470 KRTAP10-10P60014 251 aa6.69□□□□□ -1.34
SSH1-201ENST00000326470 KRTAP19-8Q3LI54 63 aa6.66□□□□□ -1.34
SSH1-201ENST00000326470 KRTAP9-8Q9BYQ0 159 aa6.64□□□□□ -1.35
SSH1-201ENST00000326470 KRTAP10-5P60370 271 aa6.59□□□□□ -1.35
SSH1-201ENST00000326470 PRO2289Q9P1D8 64 aa6.58□□□□□ -1.36
SSH1-201ENST00000326470 MT1XP80297 61 aa6.57□□□□□ -1.36
SSH1-201ENST00000326470 MT1BP07438 61 aa6.56□□□□□ -1.36
SSH1-201ENST00000326470 KRTAP12-3P60328 96 aa6.55□□□□□ -1.36
SSH1-201ENST00000326470 LCE2AQ5TA79 106 aaPredicted RBP6.54□□□□□ -1.36
SSH1-201ENST00000326470 INE1O15225 51 aa6.52□□□□□ -1.36
SSH1-201ENST00000326470 KRTAP10-12P60413 245 aa6.52□□□□□ -1.36
SSH1-201ENST00000326470 KRTAP10-7P60409 375 aaPredicted RBP6.41□□□□□ -1.38
SSH1-201ENST00000326470 KRTAP9-3Q9BYQ3 159 aa6.39□□□□□ -1.39
SSH1-201ENST00000326470 USH2AO75445 5202 aa6.35□□□□□ -1.39
SSH1-201ENST00000326470 FSIP2Q5CZC0 6907 aa6.26□□□□□ -1.41
SSH1-201ENST00000326470 LCE2BO14633 110 aa6.19□□□□□ -1.42
SSH1-201ENST00000326470 KRTAP19-5Q3LI72 72 aa6.18□□□□□ -1.42
SSH1-201ENST00000326470 LCE3CQ5T5A8 94 aa6.18□□□□□ -1.42
SSH1-201ENST00000326470 SSPOA2VEC9 5147 aa6.04□□□□□ -1.44
SSH1-201ENST00000326470 KRTAP9-6A8MVA2 160 aa5.98□□□□□ -1.45
SSH1-201ENST00000326470 KRTAP4-8A0A0G2JLE6 195 aa5.95□□□□□ -1.46
SSH1-201ENST00000326470 KRTAP4-8Q9BYQ9 185 aa5.95□□□□□ -1.46
SSH1-201ENST00000326470 KMT2DO14686 5537 aa5.94□□□□□ -1.46
SSH1-201ENST00000326470 KRTAP2-3P0C7H8 128 aa5.88□□□□□ -1.47
SSH1-201ENST00000326470 KRTAP2-4Q9BYR9 128 aa5.88□□□□□ -1.47
SSH1-201ENST00000326470 KRTAP2-1Q9BYU5 128 aa5.88□□□□□ -1.47
SSH1-201ENST00000326470 KRTAP19-7Q3SYF9 63 aa5.86□□□□□ -1.47
SSH1-201ENST00000326470 LCE2DQ5TA82 110 aaPredicted RBP5.83□□□□□ -1.48
SSH1-201ENST00000326470 KRTAP19-4Q3LI73 84 aa5.8□□□□□ -1.48
SSH1-201ENST00000326470 KRTAP4-7Q9BYR0 210 aa5.8□□□□□ -1.48
SSH1-201ENST00000326470 KRTAP9-2Q9BYQ4 174 aa5.76□□□□□ -1.49
SSH1-201ENST00000326470 FCGBPQ9Y6R7 5405 aaPredicted RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms