RNA–Protein interactions for RNA: ENST00000323347.14

SMARCD2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2 BASIC

Gene SMARCD2, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-202ENST00000323347 MIR22HGQ0VDD5 57 aa8.44□□□□□ -1.06
SMARCD2-202ENST00000323347 UQCR11O14957 56 aa8.44□□□□□ -1.06
SMARCD2-202ENST00000323347 KRTAP3-1Q9BYR8 98 aa8.42□□□□□ -1.06
SMARCD2-202ENST00000323347 FLG2Q5D862 2391 aaPredicted RBP8.41□□□□□ -1.06
SMARCD2-202ENST00000323347 TNXBP22105 4242 aa8.41□□□□□ -1.06
SMARCD2-202ENST00000323347 FAT3Q8TDW7 4589 aa8.41□□□□□ -1.06
SMARCD2-202ENST00000323347 Q5VSD8 79 aa8.39□□□□□ -1.07
SMARCD2-202ENST00000323347 CSAG1Q6PB30 78 aa8.39□□□□□ -1.07
SMARCD2-202ENST00000323347 UBR4Q5T4S7 5183 aa8.37□□□□□ -1.07
SMARCD2-202ENST00000323347 COX6B2Q6YFQ2 88 aa8.33□□□□□ -1.08
SMARCD2-202ENST00000323347 LRP1Q07954 4544 aaKnown RBP8.29□□□□□ -1.08
SMARCD2-202ENST00000323347 RPL37P61927 97 aaKnown RBP8.29□□□□□ -1.08
SMARCD2-202ENST00000323347 XP32Q5T750 250 aa8.23□□□□□ -1.09
SMARCD2-202ENST00000323347 MT1HL1P0DM35 61 aa8.22□□□□□ -1.09
SMARCD2-202ENST00000323347 MYCBP2O75592 4640 aa8.19□□□□□ -1.1
SMARCD2-202ENST00000323347 J3QL48 77 aa8.16□□□□□ -1.1
SMARCD2-202ENST00000323347 ROMO1P60602 79 aa8.15□□□□□ -1.1
SMARCD2-202ENST00000323347 KRTAP25-1Q3LHN0 102 aa8.15□□□□□ -1.1
SMARCD2-202ENST00000323347 A0A1B0GU33 70 aa8.13□□□□□ -1.11
SMARCD2-202ENST00000323347 H0YAA0 97 aa8.13□□□□□ -1.11
SMARCD2-202ENST00000323347 H1FX-AS1Q4G0G2 97 aa8.13□□□□□ -1.11
SMARCD2-202ENST00000323347 HMCN2Q8NDA2 5059 aa8.1□□□□□ -1.11
SMARCD2-202ENST00000323347 KRTAP3-3Q9BYR6 98 aa8.09□□□□□ -1.11
SMARCD2-202ENST00000323347 TPRXLQ17RH7 258 aa8.03□□□□□ -1.12
SMARCD2-202ENST00000323347 S4R3F8 94 aa7.99□□□□□ -1.13
SMARCD2-202ENST00000323347 KRTAP10-6P60371 365 aaPredicted RBP7.99□□□□□ -1.13
SMARCD2-202ENST00000323347 KRTAP3-2Q9BYR7 98 aa7.95□□□□□ -1.14
SMARCD2-202ENST00000323347 K7ERS5 55 aa7.86□□□□□ -1.15
SMARCD2-202ENST00000323347 P0C880 135 aa7.86□□□□□ -1.15
SMARCD2-202ENST00000323347 RNF213Q63HN8 5207 aa7.85□□□□□ -1.15
SMARCD2-202ENST00000323347 KRTAP13-4Q3LI77 160 aa7.82□□□□□ -1.16
SMARCD2-202ENST00000323347 LRP2P98164 4655 aa7.79□□□□□ -1.16
SMARCD2-202ENST00000323347 LPAP08519 4548 aa7.76□□□□□ -1.17
SMARCD2-202ENST00000323347 SEC61BP60468 96 aaKnown RBP7.7□□□□□ -1.18
SMARCD2-202ENST00000323347 SPINT4Q6UDR6 99 aa7.67□□□□□ -1.18
SMARCD2-202ENST00000323347 CRIPTQ9P021 101 aa7.66□□□□□ -1.18
SMARCD2-202ENST00000323347 KRTAP9-2Q9BYQ4 174 aa7.65□□□□□ -1.18
SMARCD2-202ENST00000323347 A0A0D9SG42 100 aa7.64□□□□□ -1.19
SMARCD2-202ENST00000323347 M0QZ58 72 aa7.63□□□□□ -1.19
SMARCD2-202ENST00000323347 KRTAP9-6A0A140TA67 174 aa7.61□□□□□ -1.19
SMARCD2-202ENST00000323347 MUC17Q685J3 4493 aa7.6□□□□□ -1.19
SMARCD2-202ENST00000323347 KRTAP15-1Q3LI76 137 aa7.56□□□□□ -1.2
SMARCD2-202ENST00000323347 KRTAP4-1Q9BYQ7 146 aa7.56□□□□□ -1.2
SMARCD2-202ENST00000323347 KRTAP12-1P59990 96 aa7.55□□□□□ -1.2
SMARCD2-202ENST00000323347 NDUFAF8A1L188 74 aa7.54□□□□□ -1.2
SMARCD2-202ENST00000323347 KRTAP12-2P59991 146 aa7.54□□□□□ -1.2
SMARCD2-202ENST00000323347 KRTAP19-2Q3LHN2 52 aa7.51□□□□□ -1.21
SMARCD2-202ENST00000323347 FAT4Q6V0I7 4981 aa7.47□□□□□ -1.21
SMARCD2-202ENST00000323347 A0A0A0MQY5 61 aa7.4□□□□□ -1.22
SMARCD2-202ENST00000323347 R4GN34 69 aa7.37□□□□□ -1.23
SMARCD2-202ENST00000323347 C10orf95Q9H7T3 257 aa7.34□□□□□ -1.23
SMARCD2-202ENST00000323347 LORP23490 312 aaPredicted RBP7.32□□□□□ -1.24
SMARCD2-202ENST00000323347 MUC2Q02817 5179 aa7.27□□□□□ -1.25
SMARCD2-202ENST00000323347 LCE2AQ5TA79 106 aaPredicted RBP7.25□□□□□ -1.25
SMARCD2-202ENST00000323347 FLGP20930 4061 aaPredicted RBP7.22□□□□□ -1.25
SMARCD2-202ENST00000323347 LUZP6Q538Z0 58 aa7.15□□□□□ -1.27
SMARCD2-202ENST00000323347 CRCT1Q9UGL9 99 aa7.13□□□□□ -1.27
SMARCD2-202ENST00000323347 LCE2CQ5TA81 110 aa7.08□□□□□ -1.28
SMARCD2-202ENST00000323347 LCE2DQ5TA82 110 aaPredicted RBP7.08□□□□□ -1.28
SMARCD2-202ENST00000323347 FSIP2Q5CZC0 6907 aa7.01□□□□□ -1.29
SMARCD2-202ENST00000323347 CAMK2N1Q7Z7J9 78 aa6.95□□□□□ -1.3
SMARCD2-202ENST00000323347 PLAC4Q8WY50 150 aa6.95□□□□□ -1.3
SMARCD2-202ENST00000323347 SPRR2GQ9BYE4 73 aa6.89□□□□□ -1.31
SMARCD2-202ENST00000323347 PP632Q6XCG6 107 aa6.89□□□□□ -1.31
SMARCD2-202ENST00000323347 MT1HP80294 61 aa6.86□□□□□ -1.31
SMARCD2-202ENST00000323347 KRTAP19-1Q8IUB9 90 aa6.82□□□□□ -1.32
SMARCD2-202ENST00000323347 KRTAP23-1A1A580 65 aa6.8□□□□□ -1.32
SMARCD2-202ENST00000323347 KRTAP9-7A8MTY7 169 aa6.76□□□□□ -1.33
SMARCD2-202ENST00000323347 M0R2T5 61 aa6.75□□□□□ -1.33
SMARCD2-202ENST00000323347 TNP1P09430 55 aa6.75□□□□□ -1.33
SMARCD2-202ENST00000323347 MT2AP02795 61 aa6.73□□□□□ -1.33
SMARCD2-202ENST00000323347 KRTAP9-8Q9BYQ0 159 aa6.72□□□□□ -1.33
SMARCD2-202ENST00000323347 MT1FP04733 61 aa6.7□□□□□ -1.34
SMARCD2-202ENST00000323347 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.67□□□□□ -1.34
SMARCD2-202ENST00000323347 KRTAP10-10P60014 251 aa6.64□□□□□ -1.35
SMARCD2-202ENST00000323347 KRTAP19-8Q3LI54 63 aa6.64□□□□□ -1.35
SMARCD2-202ENST00000323347 MT1BP07438 61 aa6.49□□□□□ -1.37
SMARCD2-202ENST00000323347 KRTAP9-3Q9BYQ3 159 aa6.45□□□□□ -1.38
SMARCD2-202ENST00000323347 SPRR5A0A1B0GTR4 108 aa6.42□□□□□ -1.38
SMARCD2-202ENST00000323347 KRTAP10-5P60370 271 aa6.41□□□□□ -1.38
SMARCD2-202ENST00000323347 MT1XP80297 61 aa6.4□□□□□ -1.39
SMARCD2-202ENST00000323347 LCE3AQ5TA76 89 aa6.38□□□□□ -1.39
SMARCD2-202ENST00000323347 SSPOA2VEC9 5147 aa6.37□□□□□ -1.39
SMARCD2-202ENST00000323347 PRO2289Q9P1D8 64 aa6.36□□□□□ -1.39
SMARCD2-202ENST00000323347 KRTAP8-1Q8IUC2 63 aa6.33□□□□□ -1.4
SMARCD2-202ENST00000323347 FCGBPQ9Y6R7 5405 aaPredicted RBP6.32□□□□□ -1.4
SMARCD2-202ENST00000323347 USH2AO75445 5202 aa6.3□□□□□ -1.4
SMARCD2-202ENST00000323347 SYNE2Q8WXH0 6885 aaKnown RBP6.27□□□□□ -1.41
SMARCD2-202ENST00000323347 MACF1Q9UPN3 7388 aaKnown RBP6.22□□□□□ -1.41
SMARCD2-202ENST00000323347 INE1O15225 51 aa6.21□□□□□ -1.42
SMARCD2-202ENST00000323347 KRTAP10-12P60413 245 aa6.2□□□□□ -1.42
SMARCD2-202ENST00000323347 LCE2BO14633 110 aa6.17□□□□□ -1.42
SMARCD2-202ENST00000323347 KRTAP10-7P60409 375 aaPredicted RBP6.15□□□□□ -1.42
SMARCD2-202ENST00000323347 KRTAP12-3P60328 96 aa6.11□□□□□ -1.43
SMARCD2-202ENST00000323347 NEBP20929 6669 aa6.09□□□□□ -1.43
SMARCD2-202ENST00000323347 KRTAP6-3Q3LI67 103 aa6.05□□□□□ -1.44
SMARCD2-202ENST00000323347 KRTAP19-6Q3LI70 58 aa5.91□□□□□ -1.46
SMARCD2-202ENST00000323347 KRTAP20-1Q3LI63 56 aa5.9□□□□□ -1.46
SMARCD2-202ENST00000323347 KRTAP19-5Q3LI72 72 aa5.89□□□□□ -1.47
SMARCD2-202ENST00000323347 KRTAP4-8A0A0G2JLE6 195 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms