RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 LRP1Q07954 4544 aaKnown RBP9.24□□□□□ -0.93
PRKCB-202ENST00000321728 SPINT4Q6UDR6 99 aa9.24□□□□□ -0.93
PRKCB-202ENST00000321728 TPRXLQ17RH7 258 aa9.22□□□□□ -0.93
PRKCB-202ENST00000321728 KRTAP3-3Q9BYR6 98 aa9.22□□□□□ -0.93
PRKCB-202ENST00000321728 KRTAP10-4P60372 401 aaPredicted RBP9.2□□□□□ -0.94
PRKCB-202ENST00000321728 MYCBP2O75592 4640 aa9.19□□□□□ -0.94
PRKCB-202ENST00000321728 KRTAP3-2Q9BYR7 98 aa9.17□□□□□ -0.94
PRKCB-202ENST00000321728 C10orf95Q9H7T3 257 aa9.16□□□□□ -0.94
PRKCB-202ENST00000321728 HSPG2P98160 4391 aa9.14□□□□□ -0.95
PRKCB-202ENST00000321728 KRTAP21-3Q3LHN1 58 aa9.14□□□□□ -0.95
PRKCB-202ENST00000321728 KMT2CQ8NEZ4 4911 aaKnown RBP9.13□□□□□ -0.95
PRKCB-202ENST00000321728 S4R3F8 94 aa9.12□□□□□ -0.95
PRKCB-202ENST00000321728 A0A1B0GVY2 172 aa9.11□□□□□ -0.95
PRKCB-202ENST00000321728 KRTAP10-8P60410 259 aa9.06□□□□□ -0.96
PRKCB-202ENST00000321728 RYR2Q92736 4967 aa9.05□□□□□ -0.96
PRKCB-202ENST00000321728 FAT3Q8TDW7 4589 aa9.05□□□□□ -0.96
PRKCB-202ENST00000321728 KRTAP12-2P59991 146 aa9.02□□□□□ -0.97
PRKCB-202ENST00000321728 TNXBP22105 4242 aa9□□□□□ -0.97
PRKCB-202ENST00000321728 NDUFAF8A1L188 74 aa8.96□□□□□ -0.97
PRKCB-202ENST00000321728 KRTAP15-1Q3LI76 137 aa8.95□□□□□ -0.98
PRKCB-202ENST00000321728 XP32Q5T750 250 aa8.93□□□□□ -0.98
PRKCB-202ENST00000321728 LPAP08519 4548 aa8.9□□□□□ -0.98
PRKCB-202ENST00000321728 KRTAP12-1P59990 96 aa8.9□□□□□ -0.98
PRKCB-202ENST00000321728 Q5VSD8 79 aa8.87□□□□□ -0.99
PRKCB-202ENST00000321728 KRTAP17-1Q9BYP8 105 aa8.84□□□□□ -0.99
PRKCB-202ENST00000321728 KIAA1109Q2LD37 5005 aa8.77□□□□□ -1.01
PRKCB-202ENST00000321728 RYR3Q15413 4870 aa8.77□□□□□ -1.01
PRKCB-202ENST00000321728 M0QZ58 72 aa8.75□□□□□ -1.01
PRKCB-202ENST00000321728 LRP2P98164 4655 aa8.74□□□□□ -1.01
PRKCB-202ENST00000321728 RYR1P21817 5038 aa8.69□□□□□ -1.02
PRKCB-202ENST00000321728 MT1HL1P0DM35 61 aa8.59□□□□□ -1.03
PRKCB-202ENST00000321728 ABCA13Q86UQ4 5058 aa8.58□□□□□ -1.04
PRKCB-202ENST00000321728 R4GN34 69 aa8.53□□□□□ -1.04
PRKCB-202ENST00000321728 EPPK1P58107 5090 aaKnown RBP8.49□□□□□ -1.05
PRKCB-202ENST00000321728 PLAC4Q8WY50 150 aa8.44□□□□□ -1.06
PRKCB-202ENST00000321728 KRTAP4-5Q9BYR2 181 aa8.34□□□□□ -1.07
PRKCB-202ENST00000321728 LORP23490 312 aaPredicted RBP8.32□□□□□ -1.08
PRKCB-202ENST00000321728 MUC2Q02817 5179 aa8.2□□□□□ -1.1
PRKCB-202ENST00000321728 LUZP6Q538Z0 58 aa8.17□□□□□ -1.1
PRKCB-202ENST00000321728 KRTAP4-1Q9BYQ7 146 aa8.17□□□□□ -1.1
PRKCB-202ENST00000321728 CAMK2N1Q7Z7J9 78 aa8.17□□□□□ -1.1
PRKCB-202ENST00000321728 MUC17Q685J3 4493 aa8.16□□□□□ -1.1
PRKCB-202ENST00000321728 PP632Q6XCG6 107 aa8.15□□□□□ -1.11
PRKCB-202ENST00000321728 SEC61BP60468 96 aaKnown RBP8.1□□□□□ -1.11
PRKCB-202ENST00000321728 A0A0A0MQY5 61 aa8.02□□□□□ -1.13
PRKCB-202ENST00000321728 J3QL48 77 aa7.97□□□□□ -1.13
PRKCB-202ENST00000321728 HERC2O95714 4834 aa7.97□□□□□ -1.13
PRKCB-202ENST00000321728 TNP1P09430 55 aa7.86□□□□□ -1.15
PRKCB-202ENST00000321728 KRTAP19-2Q3LHN2 52 aa7.85□□□□□ -1.15
PRKCB-202ENST00000321728 PCLOQ9Y6V0 5065 aa7.81□□□□□ -1.16
PRKCB-202ENST00000321728 FAT4Q6V0I7 4981 aa7.76□□□□□ -1.17
PRKCB-202ENST00000321728 HERC1Q15751 4861 aa7.75□□□□□ -1.17
PRKCB-202ENST00000321728 KRTAP23-1A1A580 65 aa7.71□□□□□ -1.17
PRKCB-202ENST00000321728 FLGP20930 4061 aaPredicted RBP7.71□□□□□ -1.18
PRKCB-202ENST00000321728 SPRR5A0A1B0GTR4 108 aa7.69□□□□□ -1.18
PRKCB-202ENST00000321728 BIRC6Q9NR09 4857 aa7.62□□□□□ -1.19
PRKCB-202ENST00000321728 RNF213Q63HN8 5207 aa7.54□□□□□ -1.2
PRKCB-202ENST00000321728 HMCN2Q8NDA2 5059 aa7.48□□□□□ -1.21
PRKCB-202ENST00000321728 M0R2T5 61 aa7.4□□□□□ -1.22
PRKCB-202ENST00000321728 LCE3AQ5TA76 89 aa7.4□□□□□ -1.23
PRKCB-202ENST00000321728 UBR4Q5T4S7 5183 aa7.39□□□□□ -1.23
PRKCB-202ENST00000321728 LCE2CQ5TA81 110 aa7.38□□□□□ -1.23
PRKCB-202ENST00000321728 SPRR2GQ9BYE4 73 aa7.38□□□□□ -1.23
PRKCB-202ENST00000321728 KRTAP19-1Q8IUB9 90 aa7.34□□□□□ -1.23
PRKCB-202ENST00000321728 PRO2289Q9P1D8 64 aa7.22□□□□□ -1.25
PRKCB-202ENST00000321728 KRTAP10-10P60014 251 aa7.2□□□□□ -1.26
PRKCB-202ENST00000321728 MT1HP80294 61 aa7.19□□□□□ -1.26
PRKCB-202ENST00000321728 MT1FP04733 61 aa7.18□□□□□ -1.26
PRKCB-202ENST00000321728 KRTAP8-1Q8IUC2 63 aa7.14□□□□□ -1.27
PRKCB-202ENST00000321728 MT2AP02795 61 aa7.13□□□□□ -1.27
PRKCB-202ENST00000321728 INE1O15225 51 aa7.11□□□□□ -1.27
PRKCB-202ENST00000321728 KRTAP12-3P60328 96 aa7.02□□□□□ -1.29
PRKCB-202ENST00000321728 KRTAP9-8Q9BYQ0 159 aa7.02□□□□□ -1.29
PRKCB-202ENST00000321728 KRTAP10-5P60370 271 aa6.97□□□□□ -1.29
PRKCB-202ENST00000321728 KRTAP10-12P60413 245 aa6.96□□□□□ -1.29
PRKCB-202ENST00000321728 KRTAP19-8Q3LI54 63 aa6.95□□□□□ -1.3
PRKCB-202ENST00000321728 MT1XP80297 61 aa6.95□□□□□ -1.3
PRKCB-202ENST00000321728 MT1BP07438 61 aa6.91□□□□□ -1.3
PRKCB-202ENST00000321728 USH2AO75445 5202 aa6.83□□□□□ -1.32
PRKCB-202ENST00000321728 KRTAP10-7P60409 375 aaPredicted RBP6.83□□□□□ -1.32
PRKCB-202ENST00000321728 KMT2DO14686 5537 aa6.79□□□□□ -1.32
PRKCB-202ENST00000321728 KRTAP9-3Q9BYQ3 159 aa6.69□□□□□ -1.34
PRKCB-202ENST00000321728 LCE3CQ5T5A8 94 aa6.62□□□□□ -1.35
PRKCB-202ENST00000321728 KRTAP19-5Q3LI72 72 aa6.61□□□□□ -1.35
PRKCB-202ENST00000321728 LCE2BO14633 110 aa6.52□□□□□ -1.37
PRKCB-202ENST00000321728 KRTAP4-8A0A0G2JLE6 195 aa6.47□□□□□ -1.37
PRKCB-202ENST00000321728 KRTAP4-8Q9BYQ9 185 aa6.47□□□□□ -1.37
PRKCB-202ENST00000321728 KRTAP9-6A8MVA2 160 aa6.42□□□□□ -1.38
PRKCB-202ENST00000321728 KRTAP4-7Q9BYR0 210 aa6.32□□□□□ -1.4
PRKCB-202ENST00000321728 KRTAP2-3P0C7H8 128 aa6.27□□□□□ -1.41
PRKCB-202ENST00000321728 KRTAP2-4Q9BYR9 128 aa6.27□□□□□ -1.41
PRKCB-202ENST00000321728 KRTAP2-1Q9BYU5 128 aa6.27□□□□□ -1.41
PRKCB-202ENST00000321728 FSIP2Q5CZC0 6907 aa6.24□□□□□ -1.41
PRKCB-202ENST00000321728 LCE2AQ5TA79 106 aaPredicted RBP6.19□□□□□ -1.42
PRKCB-202ENST00000321728 KRTAP19-7Q3SYF9 63 aa6.18□□□□□ -1.42
PRKCB-202ENST00000321728 MT1LQ93083 61 aa6.04□□□□□ -1.44
PRKCB-202ENST00000321728 SSPOA2VEC9 5147 aa6.03□□□□□ -1.44
PRKCB-202ENST00000321728 KRTAP19-4Q3LI73 84 aa6□□□□□ -1.45
PRKCB-202ENST00000321728 MT1EP04732 61 aa5.98□□□□□ -1.45
PRKCB-202ENST00000321728 MUC12Q9UKN1 5478 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms