RNA–Protein interactions for RNA: ENST00000317991.9

GRAMD1A-201, Transcript of GRAM domain containing 1A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GRAMD1A, Length 2,695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-201ENST00000317991 KRTAP13-4Q3LI77 160 aa11.58□□□□□ -0.56
GRAMD1A-201ENST00000317991 A0A0D9SG42 100 aa11.57□□□□□ -0.56
GRAMD1A-201ENST00000317991 KRTAP10-6P60371 365 aaPredicted RBP11.57□□□□□ -0.56
GRAMD1A-201ENST00000317991 KRTAP10-4P60372 401 aaPredicted RBP11.54□□□□□ -0.56
GRAMD1A-201ENST00000317991 HSPG2P98160 4391 aa11.54□□□□□ -0.56
GRAMD1A-201ENST00000317991 KRTAP3-3Q9BYR6 98 aa11.53□□□□□ -0.56
GRAMD1A-201ENST00000317991 FAT3Q8TDW7 4589 aa11.51□□□□□ -0.57
GRAMD1A-201ENST00000317991 RPL37P61927 97 aaKnown RBP11.51□□□□□ -0.57
GRAMD1A-201ENST00000317991 P0C880 135 aa11.5□□□□□ -0.57
GRAMD1A-201ENST00000317991 LRP1Q07954 4544 aaKnown RBP11.47□□□□□ -0.57
GRAMD1A-201ENST00000317991 MYCBP2O75592 4640 aa11.46□□□□□ -0.57
GRAMD1A-201ENST00000317991 KRTAP3-2Q9BYR7 98 aa11.44□□□□□ -0.58
GRAMD1A-201ENST00000317991 TPRXLQ17RH7 258 aa11.43□□□□□ -0.58
GRAMD1A-201ENST00000317991 KRTAP10-8P60410 259 aa11.38□□□□□ -0.59
GRAMD1A-201ENST00000317991 C10orf95Q9H7T3 257 aa11.37□□□□□ -0.59
GRAMD1A-201ENST00000317991 EPPK1P58107 5090 aaKnown RBP11.36□□□□□ -0.59
GRAMD1A-201ENST00000317991 TNXBP22105 4242 aa11.34□□□□□ -0.59
GRAMD1A-201ENST00000317991 SPINT4Q6UDR6 99 aa11.29□□□□□ -0.6
GRAMD1A-201ENST00000317991 S4R3F8 94 aa11.29□□□□□ -0.6
GRAMD1A-201ENST00000317991 KIAA1109Q2LD37 5005 aa11.27□□□□□ -0.61
GRAMD1A-201ENST00000317991 KRTAP12-2P59991 146 aa11.22□□□□□ -0.61
GRAMD1A-201ENST00000317991 RYR1P21817 5038 aa11.18□□□□□ -0.62
GRAMD1A-201ENST00000317991 XP32Q5T750 250 aa11.17□□□□□ -0.62
GRAMD1A-201ENST00000317991 KRTAP17-1Q9BYP8 105 aa11.16□□□□□ -0.62
GRAMD1A-201ENST00000317991 LPAP08519 4548 aa11.14□□□□□ -0.63
GRAMD1A-201ENST00000317991 Q5VSD8 79 aa11.09□□□□□ -0.63
GRAMD1A-201ENST00000317991 KRTAP12-1P59990 96 aa11.05□□□□□ -0.64
GRAMD1A-201ENST00000317991 KRTAP15-1Q3LI76 137 aa11.03□□□□□ -0.64
GRAMD1A-201ENST00000317991 NDUFAF8A1L188 74 aa10.99□□□□□ -0.65
GRAMD1A-201ENST00000317991 LRP2P98164 4655 aa10.93□□□□□ -0.66
GRAMD1A-201ENST00000317991 KRTAP4-5Q9BYR2 181 aa10.83□□□□□ -0.68
GRAMD1A-201ENST00000317991 M0QZ58 72 aa10.78□□□□□ -0.68
GRAMD1A-201ENST00000317991 ABCA13Q86UQ4 5058 aa10.71□□□□□ -0.69
GRAMD1A-201ENST00000317991 BIRC6Q9NR09 4857 aa10.67□□□□□ -0.7
GRAMD1A-201ENST00000317991 MT1HL1P0DM35 61 aa10.67□□□□□ -0.7
GRAMD1A-201ENST00000317991 HERC2O95714 4834 aa10.59□□□□□ -0.71
GRAMD1A-201ENST00000317991 R4GN34 69 aa10.54□□□□□ -0.72
GRAMD1A-201ENST00000317991 LORP23490 312 aaPredicted RBP10.48□□□□□ -0.73
GRAMD1A-201ENST00000317991 PCLOQ9Y6V0 5065 aa10.41□□□□□ -0.74
GRAMD1A-201ENST00000317991 PLAC4Q8WY50 150 aa10.37□□□□□ -0.75
GRAMD1A-201ENST00000317991 MUC17Q685J3 4493 aa10.34□□□□□ -0.75
GRAMD1A-201ENST00000317991 J3QL48 77 aa10.33□□□□□ -0.76
GRAMD1A-201ENST00000317991 HERC1Q15751 4861 aa10.22□□□□□ -0.77
GRAMD1A-201ENST00000317991 KRTAP4-1Q9BYQ7 146 aa10.16□□□□□ -0.78
GRAMD1A-201ENST00000317991 CAMK2N1Q7Z7J9 78 aa10.07□□□□□ -0.8
GRAMD1A-201ENST00000317991 SEC61BP60468 96 aaKnown RBP10.05□□□□□ -0.8
GRAMD1A-201ENST00000317991 MUC2Q02817 5179 aa10.02□□□□□ -0.81
GRAMD1A-201ENST00000317991 PP632Q6XCG6 107 aa9.97□□□□□ -0.81
GRAMD1A-201ENST00000317991 KRTAP19-2Q3LHN2 52 aa9.95□□□□□ -0.82
GRAMD1A-201ENST00000317991 LUZP6Q538Z0 58 aa9.93□□□□□ -0.82
GRAMD1A-201ENST00000317991 HMCN2Q8NDA2 5059 aa9.91□□□□□ -0.82
GRAMD1A-201ENST00000317991 FLGP20930 4061 aaPredicted RBP9.77□□□□□ -0.84
GRAMD1A-201ENST00000317991 TNP1P09430 55 aa9.68□□□□□ -0.86
GRAMD1A-201ENST00000317991 A0A0A0MQY5 61 aa9.68□□□□□ -0.86
GRAMD1A-201ENST00000317991 UBR4Q5T4S7 5183 aa9.67□□□□□ -0.86
GRAMD1A-201ENST00000317991 RNF213Q63HN8 5207 aa9.6□□□□□ -0.87
GRAMD1A-201ENST00000317991 SPRR5A0A1B0GTR4 108 aa9.51□□□□□ -0.89
GRAMD1A-201ENST00000317991 FAT4Q6V0I7 4981 aa9.5□□□□□ -0.89
GRAMD1A-201ENST00000317991 KRTAP23-1A1A580 65 aa9.47□□□□□ -0.89
GRAMD1A-201ENST00000317991 KRTAP19-1Q8IUB9 90 aa9.24□□□□□ -0.93
GRAMD1A-201ENST00000317991 LCE3AQ5TA76 89 aa9.22□□□□□ -0.93
GRAMD1A-201ENST00000317991 SPRR2GQ9BYE4 73 aa9.22□□□□□ -0.93
GRAMD1A-201ENST00000317991 LCE2CQ5TA81 110 aa9.19□□□□□ -0.94
GRAMD1A-201ENST00000317991 M0R2T5 61 aa9.04□□□□□ -0.96
GRAMD1A-201ENST00000317991 MT1HP80294 61 aa8.98□□□□□ -0.97
GRAMD1A-201ENST00000317991 MT1FP04733 61 aa8.93□□□□□ -0.98
GRAMD1A-201ENST00000317991 KRTAP10-10P60014 251 aa8.91□□□□□ -0.98
GRAMD1A-201ENST00000317991 KRTAP8-1Q8IUC2 63 aa8.88□□□□□ -0.99
GRAMD1A-201ENST00000317991 MT2AP02795 61 aa8.87□□□□□ -0.99
GRAMD1A-201ENST00000317991 PRO2289Q9P1D8 64 aa8.77□□□□□ -1.01
GRAMD1A-201ENST00000317991 KRTAP9-8Q9BYQ0 159 aa8.77□□□□□ -1.01
GRAMD1A-201ENST00000317991 KRTAP10-5P60370 271 aa8.76□□□□□ -1.01
GRAMD1A-201ENST00000317991 MT1XP80297 61 aa8.73□□□□□ -1.01
GRAMD1A-201ENST00000317991 KRTAP12-3P60328 96 aa8.71□□□□□ -1.02
GRAMD1A-201ENST00000317991 KRTAP19-8Q3LI54 63 aa8.71□□□□□ -1.02
GRAMD1A-201ENST00000317991 MT1BP07438 61 aa8.69□□□□□ -1.02
GRAMD1A-201ENST00000317991 KRTAP10-12P60413 245 aa8.65□□□□□ -1.02
GRAMD1A-201ENST00000317991 INE1O15225 51 aa8.61□□□□□ -1.03
GRAMD1A-201ENST00000317991 KRTAP10-7P60409 375 aaPredicted RBP8.59□□□□□ -1.03
GRAMD1A-201ENST00000317991 LCE2AQ5TA79 106 aaPredicted RBP8.53□□□□□ -1.04
GRAMD1A-201ENST00000317991 KMT2DO14686 5537 aa8.36□□□□□ -1.07
GRAMD1A-201ENST00000317991 KRTAP9-3Q9BYQ3 159 aa8.36□□□□□ -1.07
GRAMD1A-201ENST00000317991 USH2AO75445 5202 aa8.27□□□□□ -1.09
GRAMD1A-201ENST00000317991 KRTAP19-5Q3LI72 72 aa8.27□□□□□ -1.09
GRAMD1A-201ENST00000317991 LCE3CQ5T5A8 94 aa8.21□□□□□ -1.09
GRAMD1A-201ENST00000317991 LCE2BO14633 110 aa8.15□□□□□ -1.11
GRAMD1A-201ENST00000317991 KRTAP9-6A8MVA2 160 aa8.08□□□□□ -1.12
GRAMD1A-201ENST00000317991 FSIP2Q5CZC0 6907 aa8.07□□□□□ -1.12
GRAMD1A-201ENST00000317991 KRTAP4-8A0A0G2JLE6 195 aa8.05□□□□□ -1.12
GRAMD1A-201ENST00000317991 KRTAP4-8Q9BYQ9 185 aa8.05□□□□□ -1.12
GRAMD1A-201ENST00000317991 KRTAP4-7Q9BYR0 210 aa7.91□□□□□ -1.14
GRAMD1A-201ENST00000317991 SSPOA2VEC9 5147 aa7.82□□□□□ -1.16
GRAMD1A-201ENST00000317991 KRTAP2-3P0C7H8 128 aa7.79□□□□□ -1.16
GRAMD1A-201ENST00000317991 KRTAP2-4Q9BYR9 128 aa7.79□□□□□ -1.16
GRAMD1A-201ENST00000317991 KRTAP2-1Q9BYU5 128 aa7.79□□□□□ -1.16
GRAMD1A-201ENST00000317991 KRTAP19-7Q3SYF9 63 aa7.78□□□□□ -1.16
GRAMD1A-201ENST00000317991 LCE2DQ5TA82 110 aaPredicted RBP7.6□□□□□ -1.19
GRAMD1A-201ENST00000317991 MT1LQ93083 61 aa7.56□□□□□ -1.2
GRAMD1A-201ENST00000317991 MT1EP04732 61 aa7.49□□□□□ -1.21
GRAMD1A-201ENST00000317991 KRTAP19-6Q3LI70 58 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms