RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 A0A1B0GU69 56 aa8.38□□□□□ -1.07
CLCF1-201ENST00000312438 S4R3F8 94 aa8.37□□□□□ -1.07
CLCF1-201ENST00000312438 LCA10Q71F78 164 aa8.36□□□□□ -1.07
CLCF1-201ENST00000312438 KRTAP3-3Q9BYR6 98 aa8.35□□□□□ -1.07
CLCF1-201ENST00000312438 SEC61GP60059 68 aa8.33□□□□□ -1.08
CLCF1-201ENST00000312438 HERC1Q15751 4861 aa8.33□□□□□ -1.08
CLCF1-201ENST00000312438 HMCN2Q8NDA2 5059 aa8.27□□□□□ -1.09
CLCF1-201ENST00000312438 MUC17Q685J3 4493 aa8.27□□□□□ -1.09
CLCF1-201ENST00000312438 A6NED7 52 aa8.25□□□□□ -1.09
CLCF1-201ENST00000312438 BRK1Q8WUW1 75 aa8.24□□□□□ -1.09
CLCF1-201ENST00000312438 CSAG1Q6PB30 78 aa8.2□□□□□ -1.1
CLCF1-201ENST00000312438 KRTAP19-2Q3LHN2 52 aa8.19□□□□□ -1.1
CLCF1-201ENST00000312438 UQCR11O14957 56 aa8.16□□□□□ -1.1
CLCF1-201ENST00000312438 PRO0628Q9UI54 55 aa8.13□□□□□ -1.11
CLCF1-201ENST00000312438 CDC42SE1Q9NRR8 79 aa8.12□□□□□ -1.11
CLCF1-201ENST00000312438 A0A1B0GU33 70 aa8.1□□□□□ -1.11
CLCF1-201ENST00000312438 KRTAP10-6P60371 365 aaPredicted RBP8.08□□□□□ -1.12
CLCF1-201ENST00000312438 SPATA8Q6RVD6 105 aa8.08□□□□□ -1.12
CLCF1-201ENST00000312438 KRTAP3-2Q9BYR7 98 aa8.08□□□□□ -1.12
CLCF1-201ENST00000312438 MIR22HGQ0VDD5 57 aa8.07□□□□□ -1.12
CLCF1-201ENST00000312438 A8MU10 97 aa8.06□□□□□ -1.12
CLCF1-201ENST00000312438 MUC2Q02817 5179 aa8.04□□□□□ -1.12
CLCF1-201ENST00000312438 H0YAA0 97 aa8.03□□□□□ -1.12
CLCF1-201ENST00000312438 ADM2Q7Z4H4 148 aa8.03□□□□□ -1.12
CLCF1-201ENST00000312438 P0C880 135 aa7.99□□□□□ -1.13
CLCF1-201ENST00000312438 LCE2CQ5TA81 110 aa7.96□□□□□ -1.14
CLCF1-201ENST00000312438 UBR4Q5T4S7 5183 aa7.89□□□□□ -1.15
CLCF1-201ENST00000312438 KRTAP13-4Q3LI77 160 aa7.85□□□□□ -1.15
CLCF1-201ENST00000312438 M0QZ58 72 aa7.83□□□□□ -1.16
CLCF1-201ENST00000312438 FLGP20930 4061 aaPredicted RBP7.82□□□□□ -1.16
CLCF1-201ENST00000312438 PMAIP1Q13794 54 aa7.82□□□□□ -1.16
CLCF1-201ENST00000312438 RNF213Q63HN8 5207 aa7.81□□□□□ -1.16
CLCF1-201ENST00000312438 SVIPQ8NHG7 77 aa7.8□□□□□ -1.16
CLCF1-201ENST00000312438 MT1HP80294 61 aa7.78□□□□□ -1.16
CLCF1-201ENST00000312438 LCE2DQ5TA82 110 aaPredicted RBP7.77□□□□□ -1.17
CLCF1-201ENST00000312438 M0R2T5 61 aa7.75□□□□□ -1.17
CLCF1-201ENST00000312438 R4GN34 69 aa7.75□□□□□ -1.17
CLCF1-201ENST00000312438 A0A0D9SG42 100 aa7.73□□□□□ -1.17
CLCF1-201ENST00000312438 A6NN06 94 aa7.73□□□□□ -1.17
CLCF1-201ENST00000312438 LORP23490 312 aaPredicted RBP7.71□□□□□ -1.18
CLCF1-201ENST00000312438 K7ERS5 55 aa7.7□□□□□ -1.18
CLCF1-201ENST00000312438 FAT4Q6V0I7 4981 aa7.68□□□□□ -1.18
CLCF1-201ENST00000312438 CRIPTQ9P021 101 aa7.64□□□□□ -1.19
CLCF1-201ENST00000312438 LINC01554Q52M75 96 aa7.59□□□□□ -1.19
CLCF1-201ENST00000312438 KRTAP12-1P59990 96 aa7.57□□□□□ -1.2
CLCF1-201ENST00000312438 SPINT4Q6UDR6 99 aa7.57□□□□□ -1.2
CLCF1-201ENST00000312438 KRTAP12-2P59991 146 aa7.56□□□□□ -1.2
CLCF1-201ENST00000312438 KRTAP9-8Q9BYQ0 159 aa7.53□□□□□ -1.2
CLCF1-201ENST00000312438 MT2AP02795 61 aa7.5□□□□□ -1.21
CLCF1-201ENST00000312438 KTN1-AS1Q86SY8 53 aa7.5□□□□□ -1.21
CLCF1-201ENST00000312438 KRTAP10-10P60014 251 aa7.48□□□□□ -1.21
CLCF1-201ENST00000312438 MT1FP04733 61 aa7.46□□□□□ -1.21
CLCF1-201ENST00000312438 SPRR2GQ9BYE4 73 aa7.43□□□□□ -1.22
CLCF1-201ENST00000312438 LCE2AQ5TA79 106 aaPredicted RBP7.4□□□□□ -1.23
CLCF1-201ENST00000312438 KRTAP19-1Q8IUB9 90 aa7.39□□□□□ -1.23
CLCF1-201ENST00000312438 ROMO1P60602 79 aa7.38□□□□□ -1.23
CLCF1-201ENST00000312438 CAMK2N1Q7Z7J9 78 aa7.27□□□□□ -1.25
CLCF1-201ENST00000312438 PRAC1Q96KF2 57 aa7.27□□□□□ -1.25
CLCF1-201ENST00000312438 KRTAP9-3Q9BYQ3 159 aa7.25□□□□□ -1.25
CLCF1-201ENST00000312438 PLAC4Q8WY50 150 aa7.24□□□□□ -1.25
CLCF1-201ENST00000312438 KRTAP19-8Q3LI54 63 aa7.22□□□□□ -1.25
CLCF1-201ENST00000312438 C10orf95Q9H7T3 257 aa7.17□□□□□ -1.26
CLCF1-201ENST00000312438 KRTAP25-1Q3LHN0 102 aa7.11□□□□□ -1.27
CLCF1-201ENST00000312438 MT1BP07438 61 aa7.1□□□□□ -1.27
CLCF1-201ENST00000312438 LCE2BO14633 110 aa7.01□□□□□ -1.29
CLCF1-201ENST00000312438 TNP1P09430 55 aa6.94□□□□□ -1.3
CLCF1-201ENST00000312438 KRTAP10-5P60370 271 aa6.9□□□□□ -1.31
CLCF1-201ENST00000312438 MT1XP80297 61 aa6.89□□□□□ -1.31
CLCF1-201ENST00000312438 PRO2289Q9P1D8 64 aa6.85□□□□□ -1.31
CLCF1-201ENST00000312438 PP632Q6XCG6 107 aa6.82□□□□□ -1.32
CLCF1-201ENST00000312438 KRTAP23-1A1A580 65 aa6.78□□□□□ -1.32
CLCF1-201ENST00000312438 USH2AO75445 5202 aa6.67□□□□□ -1.34
CLCF1-201ENST00000312438 KRTAP10-7P60409 375 aaPredicted RBP6.63□□□□□ -1.35
CLCF1-201ENST00000312438 LCE3AQ5TA76 89 aa6.6□□□□□ -1.35
CLCF1-201ENST00000312438 KRTAP10-12P60413 245 aa6.58□□□□□ -1.36
CLCF1-201ENST00000312438 KRTAP19-6Q3LI70 58 aa6.57□□□□□ -1.36
CLCF1-201ENST00000312438 KRTAP8-1Q8IUC2 63 aa6.49□□□□□ -1.37
CLCF1-201ENST00000312438 SSPOA2VEC9 5147 aa6.43□□□□□ -1.38
CLCF1-201ENST00000312438 FSIP2Q5CZC0 6907 aa6.41□□□□□ -1.38
CLCF1-201ENST00000312438 KRTAP12-3P60328 96 aa6.35□□□□□ -1.39
CLCF1-201ENST00000312438 KRTAP4-8A0A0G2JLE6 195 aa6.34□□□□□ -1.4
CLCF1-201ENST00000312438 KRTAP9-2Q9BYQ4 174 aa6.34□□□□□ -1.4
CLCF1-201ENST00000312438 KRTAP4-8Q9BYQ9 185 aa6.34□□□□□ -1.4
CLCF1-201ENST00000312438 KRTAP15-1Q3LI76 137 aa6.3□□□□□ -1.4
CLCF1-201ENST00000312438 KRTAP19-5Q3LI72 72 aa6.27□□□□□ -1.41
CLCF1-201ENST00000312438 KMT2DO14686 5537 aa6.16□□□□□ -1.42
CLCF1-201ENST00000312438 FCGBPQ9Y6R7 5405 aaPredicted RBP6.15□□□□□ -1.42
CLCF1-201ENST00000312438 KRTAP19-7Q3SYF9 63 aa6.15□□□□□ -1.43
CLCF1-201ENST00000312438 CRCT1Q9UGL9 99 aa6.15□□□□□ -1.43
CLCF1-201ENST00000312438 SPRR5A0A1B0GTR4 108 aa6.06□□□□□ -1.44
CLCF1-201ENST00000312438 MT1EP04732 61 aa6.04□□□□□ -1.44
CLCF1-201ENST00000312438 H3BS24 57 aa6.02□□□□□ -1.45
CLCF1-201ENST00000312438 KRTAP9-6A0A140TA67 174 aa5.99□□□□□ -1.45
CLCF1-201ENST00000312438 KRTAP19-4Q3LI73 84 aa5.97□□□□□ -1.45
CLCF1-201ENST00000312438 LUZP6Q538Z0 58 aa5.95□□□□□ -1.46
CLCF1-201ENST00000312438 LCE3CQ5T5A8 94 aa5.95□□□□□ -1.46
CLCF1-201ENST00000312438 MT1LQ93083 61 aa5.94□□□□□ -1.46
CLCF1-201ENST00000312438 MACF1Q9UPN3 7388 aaKnown RBP5.87□□□□□ -1.47
CLCF1-201ENST00000312438 NDUFAF8A1L188 74 aa5.86□□□□□ -1.47
CLCF1-201ENST00000312438 SPRR2FQ96RM1 72 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 154.5 ms