RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 LORP23490 312 aaPredicted RBP4.63□□□□□ -1.67
CHD6-201ENST00000309279 IGFL1Q6UW32 110 aa4.63□□□□□ -1.67
CHD6-201ENST00000309279 ZCCHC13Q8WW36 166 aaKnown RBP4.63□□□□□ -1.67
CHD6-201ENST00000309279 NDUFB1O75438 58 aa4.62□□□□□ -1.67
CHD6-201ENST00000309279 UBL5Q9BZL1 73 aa4.62□□□□□ -1.67
CHD6-201ENST00000309279 SPINK7P58062 85 aa4.61□□□□□ -1.67
CHD6-201ENST00000309279 LINC00208Q96KT6 92 aa4.61□□□□□ -1.67
CHD6-201ENST00000309279 KRTAP15-1Q3LI76 137 aa4.61□□□□□ -1.67
CHD6-201ENST00000309279 LPAP08519 4548 aa4.61□□□□□ -1.67
CHD6-201ENST00000309279 JMJD7-PLA2G4BH0Y9G9 81 aa4.56□□□□□ -1.68
CHD6-201ENST00000309279 H0Y9P7 68 aa4.55□□□□□ -1.68
CHD6-201ENST00000309279 TPRXLQ17RH7 258 aa4.55□□□□□ -1.68
CHD6-201ENST00000309279 UQCR11O14957 56 aa4.54□□□□□ -1.68
CHD6-201ENST00000309279 SPATA8Q6RVD6 105 aa4.54□□□□□ -1.68
CHD6-201ENST00000309279 UBR4Q5T4S7 5183 aa4.53□□□□□ -1.68
CHD6-201ENST00000309279 LOC110117498A0A087WWA1 95 aa4.52□□□□□ -1.69
CHD6-201ENST00000309279 PDE6GP18545 87 aa4.52□□□□□ -1.69
CHD6-201ENST00000309279 KRTAP13-3Q3SY46 172 aa4.52□□□□□ -1.69
CHD6-201ENST00000309279 PRO2289Q9P1D8 64 aa4.5□□□□□ -1.69
CHD6-201ENST00000309279 Q96NJ1 140 aa4.49□□□□□ -1.69
CHD6-201ENST00000309279 LINC00472Q9H8W2 130 aa4.47□□□□□ -1.69
CHD6-201ENST00000309279 R4GN34 69 aa4.46□□□□□ -1.7
CHD6-201ENST00000309279 XP32Q5T750 250 aa4.44□□□□□ -1.7
CHD6-201ENST00000309279 SPINT4Q6UDR6 99 aa4.44□□□□□ -1.7
CHD6-201ENST00000309279 RNF213Q63HN8 5207 aa4.44□□□□□ -1.7
CHD6-201ENST00000309279 C9orf92A6NGG3 77 aa4.43□□□□□ -1.7
CHD6-201ENST00000309279 IGKV4-1P06312 121 aa4.43□□□□□ -1.7
CHD6-201ENST00000309279 MUC17Q685J3 4493 aa4.42□□□□□ -1.7
CHD6-201ENST00000309279 MUC2Q02817 5179 aa4.42□□□□□ -1.7
CHD6-201ENST00000309279 COA5Q86WW8 74 aa4.39□□□□□ -1.71
CHD6-201ENST00000309279 DSCR10P59022 87 aa4.36□□□□□ -1.71
CHD6-201ENST00000309279 RPL37P61927 97 aaKnown RBP4.36□□□□□ -1.71
CHD6-201ENST00000309279 PCOTHQ58A44 107 aa4.33□□□□□ -1.72
CHD6-201ENST00000309279 KRTAP4-1Q9BYQ7 146 aa4.32□□□□□ -1.72
CHD6-201ENST00000309279 K7EQZ3 153 aa4.31□□□□□ -1.72
CHD6-201ENST00000309279 HRES1P13985 223 aa4.29□□□□□ -1.72
CHD6-201ENST00000309279 MMP24-AS1A0A0U1RRL7 71 aa4.28□□□□□ -1.72
CHD6-201ENST00000309279 A0A1B0GU69 56 aa4.28□□□□□ -1.72
CHD6-201ENST00000309279 Q8N9L7 120 aa4.27□□□□□ -1.73
CHD6-201ENST00000309279 FAT4Q6V0I7 4981 aa4.26□□□□□ -1.73
CHD6-201ENST00000309279 MRPL34Q9BQ48 92 aaKnown RBP4.25□□□□□ -1.73
CHD6-201ENST00000309279 WFDC13Q8IUB5 93 aa4.22□□□□□ -1.73
CHD6-201ENST00000309279 KRTAP19-2Q3LHN2 52 aa4.21□□□□□ -1.73
CHD6-201ENST00000309279 IGKV2-30P06310 120 aa4.21□□□□□ -1.74
CHD6-201ENST00000309279 ACYP2P14621 99 aa4.2□□□□□ -1.74
CHD6-201ENST00000309279 TP53AIP1Q9HCN2 124 aa4.14□□□□□ -1.75
CHD6-201ENST00000309279 FLGP20930 4061 aaPredicted RBP4.13□□□□□ -1.75
CHD6-201ENST00000309279 INE1O15225 51 aa4.11□□□□□ -1.75
CHD6-201ENST00000309279 COX6B2Q6YFQ2 88 aa4.11□□□□□ -1.75
CHD6-201ENST00000309279 MT1HP80294 61 aa4.1□□□□□ -1.75
CHD6-201ENST00000309279 IGKV2D-30A0A075B6S6 120 aa4.09□□□□□ -1.76
CHD6-201ENST00000309279 M0R2T5 61 aa4.01□□□□□ -1.77
CHD6-201ENST00000309279 KRTAP10-6P60371 365 aaPredicted RBP3.99□□□□□ -1.77
CHD6-201ENST00000309279 PLAC4Q8WY50 150 aa3.99□□□□□ -1.77
CHD6-201ENST00000309279 H1FX-AS1Q4G0G2 97 aa3.99□□□□□ -1.77
CHD6-201ENST00000309279 KRTAP9-8Q9BYQ0 159 aa3.93□□□□□ -1.78
CHD6-201ENST00000309279 CRIPTQ9P021 101 aa3.92□□□□□ -1.78
CHD6-201ENST00000309279 S4R3F8 94 aa3.88□□□□□ -1.79
CHD6-201ENST00000309279 MT2AP02795 61 aa3.88□□□□□ -1.79
CHD6-201ENST00000309279 KRTAP19-4Q3LI73 84 aa3.86□□□□□ -1.79
CHD6-201ENST00000309279 KRTAP9-2Q9BYQ4 174 aa3.86□□□□□ -1.79
CHD6-201ENST00000309279 MT1FP04733 61 aa3.84□□□□□ -1.79
CHD6-201ENST00000309279 KRTAP12-2P59991 146 aa3.84□□□□□ -1.79
CHD6-201ENST00000309279 KRTAP10-10P60014 251 aa3.82□□□□□ -1.8
CHD6-201ENST00000309279 KRTAP9-3Q9BYQ3 159 aa3.8□□□□□ -1.8
CHD6-201ENST00000309279 FSIP2Q5CZC0 6907 aa3.8□□□□□ -1.8
CHD6-201ENST00000309279 LCE5AQ5TCM9 118 aa3.79□□□□□ -1.8
CHD6-201ENST00000309279 PP632Q6XCG6 107 aa3.78□□□□□ -1.8
CHD6-201ENST00000309279 H0YAA0 97 aa3.77□□□□□ -1.81
CHD6-201ENST00000309279 USH2AO75445 5202 aa3.71□□□□□ -1.82
CHD6-201ENST00000309279 KRTAP19-1Q8IUB9 90 aa3.69□□□□□ -1.82
CHD6-201ENST00000309279 SPRR2GQ9BYE4 73 aa3.68□□□□□ -1.82
CHD6-201ENST00000309279 CRCT1Q9UGL9 99 aa3.68□□□□□ -1.82
CHD6-201ENST00000309279 KRTAP2-2Q9BYT5 123 aa3.67□□□□□ -1.82
CHD6-201ENST00000309279 SSPOA2VEC9 5147 aa3.67□□□□□ -1.82
CHD6-201ENST00000309279 C10orf95Q9H7T3 257 aa3.66□□□□□ -1.82
CHD6-201ENST00000309279 KRTAP9-6A0A140TA67 174 aa3.66□□□□□ -1.82
CHD6-201ENST00000309279 KRTAP19-8Q3LI54 63 aa3.62□□□□□ -1.83
CHD6-201ENST00000309279 MT1BP07438 61 aa3.59□□□□□ -1.84
CHD6-201ENST00000309279 KRTAP9-4Q9BYQ2 154 aa3.59□□□□□ -1.84
CHD6-201ENST00000309279 KRTAP19-6Q3LI70 58 aa3.58□□□□□ -1.84
CHD6-201ENST00000309279 M0QZ58 72 aa3.54□□□□□ -1.84
CHD6-201ENST00000309279 KRTAP13-4Q3LI77 160 aa3.54□□□□□ -1.84
CHD6-201ENST00000309279 FCGBPQ9Y6R7 5405 aaPredicted RBP3.53□□□□□ -1.84
CHD6-201ENST00000309279 SPRR5A0A1B0GTR4 108 aa3.46□□□□□ -1.86
CHD6-201ENST00000309279 KRTAP10-5P60370 271 aa3.46□□□□□ -1.86
CHD6-201ENST00000309279 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.42□□□□□ -1.86
CHD6-201ENST00000309279 MT1XP80297 61 aa3.41□□□□□ -1.86
CHD6-201ENST00000309279 MACF1Q9UPN3 7388 aaKnown RBP3.4□□□□□ -1.86
CHD6-201ENST00000309279 LCE1FQ5T754 118 aa3.39□□□□□ -1.87
CHD6-201ENST00000309279 KRTAP9-9Q9BYP9 154 aa3.38□□□□□ -1.87
CHD6-201ENST00000309279 SYNE2Q8WXH0 6885 aaKnown RBP3.36□□□□□ -1.87
CHD6-201ENST00000309279 A0A0D9SG42 100 aa3.34□□□□□ -1.87
CHD6-201ENST00000309279 MT3P25713 68 aa3.33□□□□□ -1.88
CHD6-201ENST00000309279 KRTAP9-7A8MTY7 169 aa3.32□□□□□ -1.88
CHD6-201ENST00000309279 KRTAP12-1P59990 96 aa3.32□□□□□ -1.88
CHD6-201ENST00000309279 LCE1AQ5T7P2 110 aa3.29□□□□□ -1.88
CHD6-201ENST00000309279 KRTAP6-3Q3LI67 103 aa3.26□□□□□ -1.89
CHD6-201ENST00000309279 KMT2DO14686 5537 aa3.26□□□□□ -1.89
CHD6-201ENST00000309279 KRTAP10-7P60409 375 aaPredicted RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms