RNA–Protein interactions for RNA: ENST00000308394.8

CASP3-201, Transcript of caspase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP3, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-201ENST00000308394 MT1HL1P0DM35 61 aa6.02□□□□□ -1.45
CASP3-201ENST00000308394 MMP24-AS1A0A0U1RRL7 71 aa6.01□□□□□ -1.45
CASP3-201ENST00000308394 UQCR11O14957 56 aa6□□□□□ -1.45
CASP3-201ENST00000308394 IGLV7-46A0A075B6I9 117 aa6□□□□□ -1.45
CASP3-201ENST00000308394 SPINT4Q6UDR6 99 aa5.99□□□□□ -1.45
CASP3-201ENST00000308394 Q5W150 140 aa5.99□□□□□ -1.45
CASP3-201ENST00000308394 KRTAP29-1A8MX34 341 aaPredicted RBP5.98□□□□□ -1.45
CASP3-201ENST00000308394 DMBT1Q9UGM3 2413 aaPredicted RBP5.96□□□□□ -1.46
CASP3-201ENST00000308394 KRTAP15-1Q3LI76 137 aa5.96□□□□□ -1.46
CASP3-201ENST00000308394 MRPL34Q9BQ48 92 aaKnown RBP5.95□□□□□ -1.46
CASP3-201ENST00000308394 HERC2O95714 4834 aa5.94□□□□□ -1.46
CASP3-201ENST00000308394 ABCA13Q86UQ4 5058 aa5.93□□□□□ -1.46
CASP3-201ENST00000308394 C9orf92A6NGG3 77 aa5.92□□□□□ -1.46
CASP3-201ENST00000308394 KRTAP23-1A1A580 65 aa5.91□□□□□ -1.46
CASP3-201ENST00000308394 A0A1B0GU69 56 aa5.9□□□□□ -1.46
CASP3-201ENST00000308394 TP53AIP1Q9HCN2 124 aa5.87□□□□□ -1.47
CASP3-201ENST00000308394 HRES1P13985 223 aa5.84□□□□□ -1.47
CASP3-201ENST00000308394 KRTAP3-3Q9BYR6 98 aa5.83□□□□□ -1.48
CASP3-201ENST00000308394 KRTAP3-2Q9BYR7 98 aa5.83□□□□□ -1.48
CASP3-201ENST00000308394 KRTAP13-3Q3SY46 172 aa5.8□□□□□ -1.48
CASP3-201ENST00000308394 PCLOQ9Y6V0 5065 aa5.76□□□□□ -1.49
CASP3-201ENST00000308394 XP32Q5T750 250 aa5.76□□□□□ -1.49
CASP3-201ENST00000308394 TPRXLQ17RH7 258 aa5.75□□□□□ -1.49
CASP3-201ENST00000308394 PCOTHQ58A44 107 aa5.72□□□□□ -1.49
CASP3-201ENST00000308394 CRIPTQ9P021 101 aa5.72□□□□□ -1.49
CASP3-201ENST00000308394 RPL37P61927 97 aaKnown RBP5.71□□□□□ -1.5
CASP3-201ENST00000308394 IGKV2D-30A0A075B6S6 120 aa5.71□□□□□ -1.5
CASP3-201ENST00000308394 IGKV2-30P06310 120 aa5.71□□□□□ -1.5
CASP3-201ENST00000308394 LPAP08519 4548 aa5.7□□□□□ -1.5
CASP3-201ENST00000308394 A0A1B0GU33 70 aa5.7□□□□□ -1.5
CASP3-201ENST00000308394 HERC1Q15751 4861 aa5.63□□□□□ -1.51
CASP3-201ENST00000308394 LRP2P98164 4655 aa5.62□□□□□ -1.51
CASP3-201ENST00000308394 ACYP2P14621 99 aa5.61□□□□□ -1.51
CASP3-201ENST00000308394 LOC100996750A0A140TA64 210 aa5.53□□□□□ -1.52
CASP3-201ENST00000308394 KRTAP4-6Q9BYQ5 205 aa5.53□□□□□ -1.52
CASP3-201ENST00000308394 HMCN2Q8NDA2 5059 aa5.51□□□□□ -1.53
CASP3-201ENST00000308394 PRO2289Q9P1D8 64 aa5.49□□□□□ -1.53
CASP3-201ENST00000308394 R4GN34 69 aa5.48□□□□□ -1.53
CASP3-201ENST00000308394 COX6B2Q6YFQ2 88 aa5.46□□□□□ -1.54
CASP3-201ENST00000308394 KRTAP4-1Q9BYQ7 146 aa5.44□□□□□ -1.54
CASP3-201ENST00000308394 KRTAP3-1Q9BYR8 98 aa5.44□□□□□ -1.54
CASP3-201ENST00000308394 MUC17Q685J3 4493 aa5.42□□□□□ -1.54
CASP3-201ENST00000308394 H0YAA0 97 aa5.4□□□□□ -1.55
CASP3-201ENST00000308394 MUC2Q02817 5179 aa5.38□□□□□ -1.55
CASP3-201ENST00000308394 H1FX-AS1Q4G0G2 97 aa5.34□□□□□ -1.55
CASP3-201ENST00000308394 UBR4Q5T4S7 5183 aa5.31□□□□□ -1.56
CASP3-201ENST00000308394 C10orf95Q9H7T3 257 aa5.31□□□□□ -1.56
CASP3-201ENST00000308394 S4R3F8 94 aa5.31□□□□□ -1.56
CASP3-201ENST00000308394 KRTAP19-2Q3LHN2 52 aa5.25□□□□□ -1.57
CASP3-201ENST00000308394 RNF213Q63HN8 5207 aa5.24□□□□□ -1.57
CASP3-201ENST00000308394 PLAC4Q8WY50 150 aa5.2□□□□□ -1.58
CASP3-201ENST00000308394 LCE2CQ5TA81 110 aa5.16□□□□□ -1.58
CASP3-201ENST00000308394 FAT4Q6V0I7 4981 aa5.13□□□□□ -1.59
CASP3-201ENST00000308394 FLGP20930 4061 aaPredicted RBP5.12□□□□□ -1.59
CASP3-201ENST00000308394 M0R2T5 61 aa5.1□□□□□ -1.59
CASP3-201ENST00000308394 LCE2BO14633 110 aa5.08□□□□□ -1.6
CASP3-201ENST00000308394 MT1HP80294 61 aa5.08□□□□□ -1.6
CASP3-201ENST00000308394 LCE2AQ5TA79 106 aaPredicted RBP5.05□□□□□ -1.6
CASP3-201ENST00000308394 KRTAP10-6P60371 365 aaPredicted RBP5.04□□□□□ -1.6
CASP3-201ENST00000308394 INE1O15225 51 aa5.03□□□□□ -1.6
CASP3-201ENST00000308394 LORP23490 312 aaPredicted RBP4.92□□□□□ -1.62
CASP3-201ENST00000308394 KRTAP13-4Q3LI77 160 aa4.91□□□□□ -1.62
CASP3-201ENST00000308394 M0QZ58 72 aa4.9□□□□□ -1.63
CASP3-201ENST00000308394 KRTAP9-8Q9BYQ0 159 aa4.88□□□□□ -1.63
CASP3-201ENST00000308394 KRTAP4-8Q9BYQ9 185 aa4.87□□□□□ -1.63
CASP3-201ENST00000308394 A0A0D9SG42 100 aa4.87□□□□□ -1.63
CASP3-201ENST00000308394 MT2AP02795 61 aa4.87□□□□□ -1.63
CASP3-201ENST00000308394 KRTAP10-10P60014 251 aa4.87□□□□□ -1.63
CASP3-201ENST00000308394 MT1FP04733 61 aa4.84□□□□□ -1.63
CASP3-201ENST00000308394 KRTAP12-2P59991 146 aa4.83□□□□□ -1.64
CASP3-201ENST00000308394 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.78□□□□□ -1.64
CASP3-201ENST00000308394 KRTAP9-2Q9BYQ4 174 aa4.76□□□□□ -1.65
CASP3-201ENST00000308394 KRTAP9-6A0A140TA67 174 aa4.74□□□□□ -1.65
CASP3-201ENST00000308394 SPRR2GQ9BYE4 73 aa4.74□□□□□ -1.65
CASP3-201ENST00000308394 KRTAP19-1Q8IUB9 90 aa4.73□□□□□ -1.65
CASP3-201ENST00000308394 KRTAP12-1P59990 96 aa4.72□□□□□ -1.65
CASP3-201ENST00000308394 PP632Q6XCG6 107 aa4.7□□□□□ -1.66
CASP3-201ENST00000308394 KRTAP9-3Q9BYQ3 159 aa4.7□□□□□ -1.66
CASP3-201ENST00000308394 KRTAP19-8Q3LI54 63 aa4.6□□□□□ -1.67
CASP3-201ENST00000308394 KRTAP4-8A0A0G2JLE6 195 aa4.58□□□□□ -1.68
CASP3-201ENST00000308394 LCE3BQ5TA77 95 aa4.57□□□□□ -1.68
CASP3-201ENST00000308394 MT1BP07438 61 aa4.56□□□□□ -1.68
CASP3-201ENST00000308394 SPRR5A0A1B0GTR4 108 aa4.53□□□□□ -1.68
CASP3-201ENST00000308394 KRTAP9-9Q9BYP9 154 aa4.52□□□□□ -1.69
CASP3-201ENST00000308394 KRTAP9-4Q9BYQ2 154 aa4.52□□□□□ -1.69
CASP3-201ENST00000308394 USH2AO75445 5202 aa4.47□□□□□ -1.69
CASP3-201ENST00000308394 KRTAP4-7Q9BYR0 210 aa4.46□□□□□ -1.7
CASP3-201ENST00000308394 KRTAP4-12Q9BQ66 201 aa4.44□□□□□ -1.7
CASP3-201ENST00000308394 MT1XP80297 61 aa4.41□□□□□ -1.7
CASP3-201ENST00000308394 KRTAP10-5P60370 271 aa4.41□□□□□ -1.7
CASP3-201ENST00000308394 FSIP2Q5CZC0 6907 aa4.39□□□□□ -1.71
CASP3-201ENST00000308394 TNP1P09430 55 aa4.36□□□□□ -1.71
CASP3-201ENST00000308394 SSPOA2VEC9 5147 aa4.3□□□□□ -1.72
CASP3-201ENST00000308394 KRTAP19-6Q3LI70 58 aa4.29□□□□□ -1.72
CASP3-201ENST00000308394 LCE1DQ5T752 114 aa4.29□□□□□ -1.72
CASP3-201ENST00000308394 KRTAP4-2Q9BYR5 136 aa4.26□□□□□ -1.73
CASP3-201ENST00000308394 KRTAP10-7P60409 375 aaPredicted RBP4.26□□□□□ -1.73
CASP3-201ENST00000308394 KRTAP4-9Q9BYQ8 210 aa4.26□□□□□ -1.73
CASP3-201ENST00000308394 KRTAP10-12P60413 245 aa4.2□□□□□ -1.74
CASP3-201ENST00000308394 KRTAP2-2Q9BYT5 123 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms