RNA–Protein interactions for RNA: ENST00000301671.12

GHDC-201, Transcript of GH3 domain containing, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GHDC, Length 2,650 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-201ENST00000301671 KRTAP3-3Q9BYR6 98 aa8.24□□□□□ -1.09
GHDC-201ENST00000301671 K7ERS5 55 aa8.23□□□□□ -1.09
GHDC-201ENST00000301671 KRTAP10-8P60410 259 aa8.23□□□□□ -1.09
GHDC-201ENST00000301671 KRTAP10-6P60371 365 aaPredicted RBP8.22□□□□□ -1.09
GHDC-201ENST00000301671 KRTAP13-4Q3LI77 160 aa8.22□□□□□ -1.09
GHDC-201ENST00000301671 TNXBP22105 4242 aa8.19□□□□□ -1.1
GHDC-201ENST00000301671 KMT2CQ8NEZ4 4911 aaKnown RBP8.17□□□□□ -1.1
GHDC-201ENST00000301671 RYR2Q92736 4967 aa8.17□□□□□ -1.1
GHDC-201ENST00000301671 KRTAP3-2Q9BYR7 98 aa8.15□□□□□ -1.11
GHDC-201ENST00000301671 RPL37P61927 97 aaKnown RBP8.13□□□□□ -1.11
GHDC-201ENST00000301671 XP32Q5T750 250 aa8.12□□□□□ -1.11
GHDC-201ENST00000301671 H3BS24 57 aa8.11□□□□□ -1.11
GHDC-201ENST00000301671 S4R3F8 94 aa8.11□□□□□ -1.11
GHDC-201ENST00000301671 ROMO1P60602 79 aa8.11□□□□□ -1.11
GHDC-201ENST00000301671 P0C880 135 aa8.1□□□□□ -1.11
GHDC-201ENST00000301671 Q5VSD8 79 aa8.07□□□□□ -1.12
GHDC-201ENST00000301671 LPAP08519 4548 aa8.02□□□□□ -1.12
GHDC-201ENST00000301671 KRTAP17-1Q9BYP8 105 aa8.02□□□□□ -1.13
GHDC-201ENST00000301671 C10orf95Q9H7T3 257 aa8.01□□□□□ -1.13
GHDC-201ENST00000301671 TPRXLQ17RH7 258 aa8□□□□□ -1.13
GHDC-201ENST00000301671 KRTAP12-2P59991 146 aa7.96□□□□□ -1.14
GHDC-201ENST00000301671 RYR3Q15413 4870 aa7.94□□□□□ -1.14
GHDC-201ENST00000301671 SPINT4Q6UDR6 99 aa7.91□□□□□ -1.14
GHDC-201ENST00000301671 LRP2P98164 4655 aa7.9□□□□□ -1.14
GHDC-201ENST00000301671 RYR1P21817 5038 aa7.87□□□□□ -1.15
GHDC-201ENST00000301671 KIAA1109Q2LD37 5005 aa7.87□□□□□ -1.15
GHDC-201ENST00000301671 MT1HL1P0DM35 61 aa7.86□□□□□ -1.15
GHDC-201ENST00000301671 KRTAP12-1P59990 96 aa7.85□□□□□ -1.15
GHDC-201ENST00000301671 ABCA13Q86UQ4 5058 aa7.68□□□□□ -1.18
GHDC-201ENST00000301671 M0QZ58 72 aa7.67□□□□□ -1.18
GHDC-201ENST00000301671 EPPK1P58107 5090 aaKnown RBP7.66□□□□□ -1.18
GHDC-201ENST00000301671 KRTAP15-1Q3LI76 137 aa7.63□□□□□ -1.19
GHDC-201ENST00000301671 NDUFAF8A1L188 74 aa7.59□□□□□ -1.19
GHDC-201ENST00000301671 R4GN34 69 aa7.57□□□□□ -1.2
GHDC-201ENST00000301671 LORP23490 312 aaPredicted RBP7.56□□□□□ -1.2
GHDC-201ENST00000301671 KRTAP4-5Q9BYR2 181 aa7.55□□□□□ -1.2
GHDC-201ENST00000301671 KRTAP4-1Q9BYQ7 146 aa7.45□□□□□ -1.22
GHDC-201ENST00000301671 MUC17Q685J3 4493 aa7.44□□□□□ -1.22
GHDC-201ENST00000301671 SEC61BP60468 96 aaKnown RBP7.37□□□□□ -1.23
GHDC-201ENST00000301671 BIRC6Q9NR09 4857 aa7.37□□□□□ -1.23
GHDC-201ENST00000301671 MUC2Q02817 5179 aa7.3□□□□□ -1.24
GHDC-201ENST00000301671 HERC2O95714 4834 aa7.27□□□□□ -1.25
GHDC-201ENST00000301671 PLAC4Q8WY50 150 aa7.24□□□□□ -1.25
GHDC-201ENST00000301671 KRTAP19-2Q3LHN2 52 aa7.24□□□□□ -1.25
GHDC-201ENST00000301671 J3QL48 77 aa7.23□□□□□ -1.25
GHDC-201ENST00000301671 CAMK2N1Q7Z7J9 78 aa7.23□□□□□ -1.25
GHDC-201ENST00000301671 FLGP20930 4061 aaPredicted RBP7.02□□□□□ -1.29
GHDC-201ENST00000301671 PCLOQ9Y6V0 5065 aa7.01□□□□□ -1.29
GHDC-201ENST00000301671 PP632Q6XCG6 107 aa7.01□□□□□ -1.29
GHDC-201ENST00000301671 FAT4Q6V0I7 4981 aa6.92□□□□□ -1.3
GHDC-201ENST00000301671 LUZP6Q538Z0 58 aa6.92□□□□□ -1.3
GHDC-201ENST00000301671 TNP1P09430 55 aa6.9□□□□□ -1.3
GHDC-201ENST00000301671 HERC1Q15751 4861 aa6.9□□□□□ -1.3
GHDC-201ENST00000301671 A0A0A0MQY5 61 aa6.8□□□□□ -1.32
GHDC-201ENST00000301671 LCE2CQ5TA81 110 aa6.76□□□□□ -1.33
GHDC-201ENST00000301671 HMCN2Q8NDA2 5059 aa6.74□□□□□ -1.33
GHDC-201ENST00000301671 KRTAP19-1Q8IUB9 90 aa6.71□□□□□ -1.34
GHDC-201ENST00000301671 M0R2T5 61 aa6.7□□□□□ -1.34
GHDC-201ENST00000301671 RNF213Q63HN8 5207 aa6.67□□□□□ -1.34
GHDC-201ENST00000301671 SPRR2GQ9BYE4 73 aa6.67□□□□□ -1.34
GHDC-201ENST00000301671 KRTAP23-1A1A580 65 aa6.66□□□□□ -1.34
GHDC-201ENST00000301671 SPRR5A0A1B0GTR4 108 aa6.63□□□□□ -1.35
GHDC-201ENST00000301671 LCE3AQ5TA76 89 aa6.61□□□□□ -1.35
GHDC-201ENST00000301671 MT1HP80294 61 aa6.57□□□□□ -1.36
GHDC-201ENST00000301671 UBR4Q5T4S7 5183 aa6.56□□□□□ -1.36
GHDC-201ENST00000301671 KRTAP10-10P60014 251 aa6.56□□□□□ -1.36
GHDC-201ENST00000301671 MT1FP04733 61 aa6.55□□□□□ -1.36
GHDC-201ENST00000301671 MT2AP02795 61 aa6.52□□□□□ -1.37
GHDC-201ENST00000301671 KRTAP9-8Q9BYQ0 159 aa6.44□□□□□ -1.38
GHDC-201ENST00000301671 KRTAP10-5P60370 271 aa6.34□□□□□ -1.39
GHDC-201ENST00000301671 MT1BP07438 61 aa6.34□□□□□ -1.39
GHDC-201ENST00000301671 MT1XP80297 61 aa6.33□□□□□ -1.4
GHDC-201ENST00000301671 KRTAP19-8Q3LI54 63 aa6.32□□□□□ -1.4
GHDC-201ENST00000301671 KRTAP8-1Q8IUC2 63 aa6.32□□□□□ -1.4
GHDC-201ENST00000301671 KRTAP12-3P60328 96 aa6.24□□□□□ -1.41
GHDC-201ENST00000301671 KRTAP10-12P60413 245 aa6.24□□□□□ -1.41
GHDC-201ENST00000301671 KRTAP10-7P60409 375 aaPredicted RBP6.23□□□□□ -1.41
GHDC-201ENST00000301671 KRTAP9-3Q9BYQ3 159 aa6.14□□□□□ -1.43
GHDC-201ENST00000301671 USH2AO75445 5202 aa6.04□□□□□ -1.44
GHDC-201ENST00000301671 KMT2DO14686 5537 aa6.04□□□□□ -1.44
GHDC-201ENST00000301671 KRTAP19-5Q3LI72 72 aa5.98□□□□□ -1.45
GHDC-201ENST00000301671 PRO2289Q9P1D8 64 aa5.97□□□□□ -1.45
GHDC-201ENST00000301671 LCE2BO14633 110 aa5.94□□□□□ -1.46
GHDC-201ENST00000301671 INE1O15225 51 aa5.89□□□□□ -1.47
GHDC-201ENST00000301671 KRTAP4-8A0A0G2JLE6 195 aa5.88□□□□□ -1.47
GHDC-201ENST00000301671 LCE2AQ5TA79 106 aaPredicted RBP5.88□□□□□ -1.47
GHDC-201ENST00000301671 KRTAP4-8Q9BYQ9 185 aa5.88□□□□□ -1.47
GHDC-201ENST00000301671 LCE3CQ5T5A8 94 aa5.86□□□□□ -1.47
GHDC-201ENST00000301671 KRTAP9-6A8MVA2 160 aa5.76□□□□□ -1.49
GHDC-201ENST00000301671 KRTAP4-7Q9BYR0 210 aa5.73□□□□□ -1.49
GHDC-201ENST00000301671 LCE2DQ5TA82 110 aaPredicted RBP5.64□□□□□ -1.51
GHDC-201ENST00000301671 KRTAP19-7Q3SYF9 63 aa5.64□□□□□ -1.51
GHDC-201ENST00000301671 KRTAP2-3P0C7H8 128 aa5.48□□□□□ -1.53
GHDC-201ENST00000301671 KRTAP2-4Q9BYR9 128 aa5.48□□□□□ -1.53
GHDC-201ENST00000301671 KRTAP2-1Q9BYU5 128 aa5.48□□□□□ -1.53
GHDC-201ENST00000301671 MT1LQ93083 61 aa5.47□□□□□ -1.53
GHDC-201ENST00000301671 FSIP2Q5CZC0 6907 aa5.46□□□□□ -1.54
GHDC-201ENST00000301671 MT1EP04732 61 aa5.44□□□□□ -1.54
GHDC-201ENST00000301671 SSPOA2VEC9 5147 aa5.39□□□□□ -1.55
GHDC-201ENST00000301671 LOC100996750A0A140TA64 210 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms